RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 IQGAP1P46940 1657 aa37.37■■■■□ 3.57
TSPAN4-207ENST00000397411 RIMS2Q9UQ26 1411 aa37.37■■■■□ 3.57
TSPAN4-207ENST00000397411 CLTCL1P53675 1640 aa37.37■■■■□ 3.57
TSPAN4-207ENST00000397411 KIF1BO60333 1816 aa37.36■■■■□ 3.57
TSPAN4-207ENST00000397411 NUTM2DQ5VT03 806 aaPredicted RBP37.33■■■■□ 3.57
TSPAN4-207ENST00000397411 ZNF335Q9H4Z2 1342 aaPredicted RBP37.33■■■■□ 3.57
TSPAN4-207ENST00000397411 SENP3Q9H4L4 574 aaPredicted RBP37.32■■■■□ 3.56
TSPAN4-207ENST00000397411 CCDC144AA2RUR9 1427 aa37.31■■■■□ 3.56
TSPAN4-207ENST00000397411 CERKQ8TCT0 537 aa37.28■■■■□ 3.56
TSPAN4-207ENST00000397411 ZFYVE9O95405 1425 aa37.27■■■■□ 3.56
TSPAN4-207ENST00000397411 SLC26A8Q96RN1 970 aa37.24■■■■□ 3.55
TSPAN4-207ENST00000397411 PLEKHG1Q9ULL1 1385 aa37.2■■■■□ 3.55
TSPAN4-207ENST00000397411 RGL3Q3MIN7 710 aa37.18■■■■□ 3.54
TSPAN4-207ENST00000397411 LTBP4Q8N2S1 1624 aa37.17■■■■□ 3.54
TSPAN4-207ENST00000397411 RPGRIP1LQ68CZ1 1315 aa37.15■■■■□ 3.54
TSPAN4-207ENST00000397411 VGFO15240 615 aaPredicted RBP37.12■■■■□ 3.53
TSPAN4-207ENST00000397411 ANKRD30BQ9BXX2 1392 aa37.11■■■■□ 3.53
TSPAN4-207ENST00000397411 TBX22Q9Y458 520 aa37.09■■■■□ 3.53
TSPAN4-207ENST00000397411 CPS1P31327 1500 aa37.07■■■■□ 3.53
TSPAN4-207ENST00000397411 NEXMIFQ5QGS0 1516 aa37.07■■■■□ 3.53
TSPAN4-207ENST00000397411 KCNA6P17658 529 aa37.04■■■■□ 3.52
TSPAN4-207ENST00000397411 SPATA31E1Q6ZUB1 1445 aa37.02■■■■□ 3.52
TSPAN4-207ENST00000397411 FBXO41Q8TF61 875 aa37.01■■■■□ 3.52
TSPAN4-207ENST00000397411 PPLO60437 1756 aa36.99■■■■□ 3.51
TSPAN4-207ENST00000397411 ADAMTS13Q76LX8 1427 aa36.98■■■■□ 3.51
TSPAN4-207ENST00000397411 STRCP1A6NGW2 1772 aa36.98■■■■□ 3.51
TSPAN4-207ENST00000397411 DIP2AQ14689 1571 aa36.95■■■■□ 3.51
TSPAN4-207ENST00000397411 IQSEC2Q5JU85 1478 aa36.95■■■■□ 3.51
TSPAN4-207ENST00000397411 PROSER2Q86WR7 435 aaPredicted RBP36.95■■■■□ 3.51
TSPAN4-207ENST00000397411 PCGF6Q9BYE7 350 aa36.94■■■■□ 3.5
TSPAN4-207ENST00000397411 SETBP1Q9Y6X0 1596 aa36.93■■■■□ 3.5
TSPAN4-207ENST00000397411 ILDR1Q86SU0 546 aaPredicted RBP36.92■■■■□ 3.5
TSPAN4-207ENST00000397411 PIK3R4Q99570 1358 aa36.9■■■■□ 3.5
TSPAN4-207ENST00000397411 CHD2O14647 1828 aaKnown RBP36.89■■■■□ 3.5
TSPAN4-207ENST00000397411 ADGRF5Q8IZF2 1346 aa36.89■■■■□ 3.5
TSPAN4-207ENST00000397411 LRRC7Q96NW7 1537 aa36.89■■■■□ 3.5
TSPAN4-207ENST00000397411 NRXN3Q9Y4C0 1643 aa36.88■■■■□ 3.49
TSPAN4-207ENST00000397411 UBAP1LF5GYI3 381 aa36.87■■■■□ 3.49
TSPAN4-207ENST00000397411 AMOTL2Q9Y2J4 779 aa36.87■■■■□ 3.49
TSPAN4-207ENST00000397411 KDM2AQ9Y2K7 1162 aa36.85■■■■□ 3.49
TSPAN4-207ENST00000397411 IFT172Q9UG01 1749 aa36.85■■■■□ 3.49
TSPAN4-207ENST00000397411 DCAF11Q8TEB1 546 aa36.83■■■■□ 3.49
TSPAN4-207ENST00000397411 DHX57Q6P158 1386 aaKnown RBP36.82■■■■□ 3.49
TSPAN4-207ENST00000397411 NWD1Q149M9 1564 aa36.82■■■■□ 3.48
TSPAN4-207ENST00000397411 METP08581 1390 aa36.81■■■■□ 3.48
TSPAN4-207ENST00000397411 RBM33Q96EV2 1170 aaKnown RBP36.81■■■■□ 3.48
TSPAN4-207ENST00000397411 TOM1O60784 492 aa36.8■■■■□ 3.48
TSPAN4-207ENST00000397411 NKTRP30414 1462 aaKnown RBP36.8■■■■□ 3.48
TSPAN4-207ENST00000397411 TMEM94Q12767 1356 aa36.79■■■■□ 3.48
TSPAN4-207ENST00000397411 ALKQ9UM73 1620 aa36.79■■■■□ 3.48
TSPAN4-207ENST00000397411 NEUROD1Q13562 356 aa36.77■■■■□ 3.48
TSPAN4-207ENST00000397411 C14orf37Q86TY3 774 aa36.77■■■■□ 3.48
TSPAN4-207ENST00000397411 PTPRUQ92729 1446 aa36.76■■■■□ 3.47
TSPAN4-207ENST00000397411 STAC3Q96MF2 364 aa36.75■■■■□ 3.47
TSPAN4-207ENST00000397411 SIN3AQ96ST3 1273 aa36.75■■■■□ 3.47
TSPAN4-207ENST00000397411 SCAF1Q9H7N4 1312 aaKnown RBP36.73■■■■□ 3.47
TSPAN4-207ENST00000397411 MYOM2P54296 1465 aa36.72■■■■□ 3.47
TSPAN4-207ENST00000397411 XIRP1Q702N8 1843 aaKnown RBP36.71■■■■□ 3.47
TSPAN4-207ENST00000397411 PIK3C2GO75747 1445 aa36.69■■■■□ 3.46
TSPAN4-207ENST00000397411 PIP4K2BP78356 416 aa36.69■■■■□ 3.46
TSPAN4-207ENST00000397411 C14orf93Q9H972 538 aaKnown RBP36.67■■■■□ 3.46
TSPAN4-207ENST00000397411 MSH6P52701 1360 aa36.66■■■■□ 3.46
TSPAN4-207ENST00000397411 SETD1AO15047 1707 aaKnown RBP36.66■■■■□ 3.46
TSPAN4-207ENST00000397411 CFAP70Q5T0N1 1121 aa36.66■■■■□ 3.46
TSPAN4-207ENST00000397411 TMEM132EQ6IEE7 984 aa36.66■■■■□ 3.46
TSPAN4-207ENST00000397411 STK26Q9P289 416 aa36.65■■■■□ 3.46
TSPAN4-207ENST00000397411 NRXN1Q9ULB1 1477 aa36.62■■■■□ 3.45
TSPAN4-207ENST00000397411 XRN1Q8IZH2 1706 aaKnown RBP36.62■■■■□ 3.45
TSPAN4-207ENST00000397411 NCOA3Q9Y6Q9 1424 aa36.61■■■■□ 3.45
TSPAN4-207ENST00000397411 C19orf44Q9H6X5 657 aa36.58■■■■□ 3.45
TSPAN4-207ENST00000397411 L3MBTL2Q969R5 705 aa36.57■■■■□ 3.44
TSPAN4-207ENST00000397411 LAMC1P11047 1609 aa36.56■■■■□ 3.44
TSPAN4-207ENST00000397411 ATF3P18847 181 aa36.55■■■■□ 3.44
TSPAN4-207ENST00000397411 LRPPRCP42704 1394 aaKnown RBP36.53■■■■□ 3.44
TSPAN4-207ENST00000397411 ROBO2Q9HCK4 1378 aa36.52■■■■□ 3.44
TSPAN4-207ENST00000397411 YTHDC2Q9H6S0 1430 aaKnown RBP36.51■■■■□ 3.43
TSPAN4-207ENST00000397411 CADPS2Q86UW7 1296 aa36.5■■■■□ 3.43
TSPAN4-207ENST00000397411 PTCH1Q13635 1447 aa36.5■■■■□ 3.43
TSPAN4-207ENST00000397411 ABCC11Q96J66 1382 aa36.49■■■■□ 3.43
TSPAN4-207ENST00000397411 SLAIN2Q9P270 581 aa36.47■■■■□ 3.43
TSPAN4-207ENST00000397411 ASXL1Q8IXJ9 1541 aa36.46■■■■□ 3.43
TSPAN4-207ENST00000397411 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.45■■■■□ 3.43
TSPAN4-207ENST00000397411 WAPLQ7Z5K2 1190 aa36.45■■■■□ 3.43
TSPAN4-207ENST00000397411 TONSLQ96HA7 1378 aa36.44■■■■□ 3.42
TSPAN4-207ENST00000397411 PRAG1Q86YV5 1406 aa36.42■■■■□ 3.42
TSPAN4-207ENST00000397411 SIRT1Q96EB6 747 aa36.4■■■■□ 3.42
TSPAN4-207ENST00000397411 POGKQ9P215 609 aa36.4■■■■□ 3.42
TSPAN4-207ENST00000397411 TRAK1Q9UPV9 953 aa36.4■■■■□ 3.42
TSPAN4-207ENST00000397411 TECPR2O15040 1411 aa36.4■■■■□ 3.42
TSPAN4-207ENST00000397411 ADGRL3Q9HAR2 1447 aa36.4■■■■□ 3.42
TSPAN4-207ENST00000397411 KNDC1Q76NI1 1749 aa36.38■■■■□ 3.41
TSPAN4-207ENST00000397411 CCER1Q8TC90 406 aaPredicted RBP36.38■■■■□ 3.41
TSPAN4-207ENST00000397411 DCCP43146 1447 aa36.34■■■■□ 3.41
TSPAN4-207ENST00000397411 NALCNQ8IZF0 1738 aa36.34■■■■□ 3.41
TSPAN4-207ENST00000397411 HSPA1LP34931 641 aa36.34■■■■□ 3.41
TSPAN4-207ENST00000397411 PRAM1Q96QH2 718 aa36.34■■■■□ 3.41
TSPAN4-207ENST00000397411 FAM135BQ49AJ0 1406 aa36.34■■■■□ 3.41
TSPAN4-207ENST00000397411 ADGRB1O14514 1584 aa36.33■■■■□ 3.41
TSPAN4-207ENST00000397411 SAFB2Q14151 953 aaKnown RBP eCLIP36.33■■■■□ 3.41
TSPAN4-207ENST00000397411 KIAA1210Q9ULL0 1709 aa36.32■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms