RNA–Protein interactions for RNA: ENST00000396344.4

HOXA10-202, Transcript of homeobox A10, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HOXA10, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10-202ENST00000396344 SCAF11Q99590 1463 aaKnown RBP24.02■■□□□ 1.44
HOXA10-202ENST00000396344 STAG3Q9UJ98 1225 aa24■■□□□ 1.43
HOXA10-202ENST00000396344 TMEM2Q9UHN6 1383 aa24■■□□□ 1.43
HOXA10-202ENST00000396344 IQGAP1P46940 1657 aa24■■□□□ 1.43
HOXA10-202ENST00000396344 EID1Q9Y6B2 187 aa23.99■■□□□ 1.43
HOXA10-202ENST00000396344 TXNDC2Q86VQ3 553 aa23.97■■□□□ 1.43
HOXA10-202ENST00000396344 ADGRB3O60242 1522 aa23.97■■□□□ 1.43
HOXA10-202ENST00000396344 CPS1P31327 1500 aa23.97■■□□□ 1.43
HOXA10-202ENST00000396344 LTKP29376 864 aa23.95■■□□□ 1.43
HOXA10-202ENST00000396344 E9PCH4 1651 aa23.95■■□□□ 1.42
HOXA10-202ENST00000396344 CENPBP07199 599 aaPredicted RBP23.93■■□□□ 1.42
HOXA10-202ENST00000396344 HDGFP51858 240 aaKnown RBP23.87■■□□□ 1.41
HOXA10-202ENST00000396344 TMEM131LA2VDJ0 1609 aa23.86■■□□□ 1.41
HOXA10-202ENST00000396344 MIER1Q8N108 512 aa23.85■■□□□ 1.41
HOXA10-202ENST00000396344 ZFYVE9O95405 1425 aa23.84■■□□□ 1.41
HOXA10-202ENST00000396344 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.82■■□□□ 1.4
HOXA10-202ENST00000396344 FOXD1Q16676 465 aa23.81■■□□□ 1.4
HOXA10-202ENST00000396344 RIMS2Q9UQ26 1411 aa23.81■■□□□ 1.4
HOXA10-202ENST00000396344 MYO5BQ9ULV0 1848 aa23.8■■□□□ 1.4
HOXA10-202ENST00000396344 SPHKAPQ2M3C7 1700 aa23.8■■□□□ 1.4
HOXA10-202ENST00000396344 L3MBTL2Q969R5 705 aa23.8■■□□□ 1.4
HOXA10-202ENST00000396344 UBAP1LF5GYI3 381 aa23.79■■□□□ 1.4
HOXA10-202ENST00000396344 PLEKHG1Q9ULL1 1385 aa23.79■■□□□ 1.4
HOXA10-202ENST00000396344 STRCP1A6NGW2 1772 aa23.78■■□□□ 1.4
HOXA10-202ENST00000396344 CHGAP10645 457 aaKnown RBP23.77■■□□□ 1.4
HOXA10-202ENST00000396344 LRRC7Q96NW7 1537 aa23.76■■□□□ 1.39
HOXA10-202ENST00000396344 TOM1O60784 492 aa23.75■■□□□ 1.39
HOXA10-202ENST00000396344 EIF4G2P78344 907 aaKnown RBP eCLIP23.74■■□□□ 1.39
HOXA10-202ENST00000396344 TRPM2O94759 1503 aa23.74■■□□□ 1.39
HOXA10-202ENST00000396344 KCNA6P17658 529 aa23.74■■□□□ 1.39
HOXA10-202ENST00000396344 SLC26A8Q96RN1 970 aa23.71■■□□□ 1.39
HOXA10-202ENST00000396344 TBX22Q9Y458 520 aa23.7■■□□□ 1.38
HOXA10-202ENST00000396344 BCANQ96GW7 911 aa23.69■■□□□ 1.38
HOXA10-202ENST00000396344 CCDC144AA2RUR9 1427 aa23.69■■□□□ 1.38
HOXA10-202ENST00000396344 NWD1Q149M9 1564 aa23.68■■□□□ 1.38
HOXA10-202ENST00000396344 NKTRP30414 1462 aaKnown RBP23.67■■□□□ 1.38
HOXA10-202ENST00000396344 DIP2AQ14689 1571 aa23.67■■□□□ 1.38
HOXA10-202ENST00000396344 CLTCL1P53675 1640 aa23.67■■□□□ 1.38
HOXA10-202ENST00000396344 RALGAPBQ86X10 1494 aa23.67■■□□□ 1.38
HOXA10-202ENST00000396344 PIK3R4Q99570 1358 aa23.65■■□□□ 1.38
HOXA10-202ENST00000396344 ADAMTS13Q76LX8 1427 aa23.64■■□□□ 1.38
HOXA10-202ENST00000396344 KIF1BO60333 1816 aa23.63■■□□□ 1.37
HOXA10-202ENST00000396344 HSPA5P11021 654 aaKnown RBP23.62■■□□□ 1.37
HOXA10-202ENST00000396344 DDX10Q13206 875 aaKnown RBP23.62■■□□□ 1.37
HOXA10-202ENST00000396344 CHD2O14647 1828 aaKnown RBP23.62■■□□□ 1.37
HOXA10-202ENST00000396344 ALKQ9UM73 1620 aa23.62■■□□□ 1.37
HOXA10-202ENST00000396344 ZNF326Q5BKZ1 582 aaKnown RBP23.61■■□□□ 1.37
HOXA10-202ENST00000396344 TMEM94Q12767 1356 aa23.61■■□□□ 1.37
HOXA10-202ENST00000396344 PROSER2Q86WR7 435 aaPredicted RBP23.61■■□□□ 1.37
HOXA10-202ENST00000396344 XIRP1Q702N8 1843 aaKnown RBP23.6■■□□□ 1.37
HOXA10-202ENST00000396344 NUTM2DQ5VT03 806 aaPredicted RBP23.59■■□□□ 1.37
HOXA10-202ENST00000396344 RPGRIP1LQ68CZ1 1315 aa23.59■■□□□ 1.37
HOXA10-202ENST00000396344 SETBP1Q9Y6X0 1596 aa23.59■■□□□ 1.37
HOXA10-202ENST00000396344 NEXMIFQ5QGS0 1516 aa23.57■■□□□ 1.36
HOXA10-202ENST00000396344 PIP4K2BP78356 416 aa23.57■■□□□ 1.36
HOXA10-202ENST00000396344 NBPF8Q3BBV2 869 aa23.57■■□□□ 1.36
HOXA10-202ENST00000396344 NCOA3Q9Y6Q9 1424 aa23.57■■□□□ 1.36
HOXA10-202ENST00000396344 ANP32CO43423 234 aa23.57■■□□□ 1.36
HOXA10-202ENST00000396344 LAMC1P11047 1609 aa23.56■■□□□ 1.36
HOXA10-202ENST00000396344 SCAF1Q9H7N4 1312 aaKnown RBP23.56■■□□□ 1.36
HOXA10-202ENST00000396344 SPATA31E1Q6ZUB1 1445 aa23.55■■□□□ 1.36
HOXA10-202ENST00000396344 CCER2I3L3R5 266 aa23.53■■□□□ 1.36
HOXA10-202ENST00000396344 VGFO15240 615 aaPredicted RBP23.53■■□□□ 1.36
HOXA10-202ENST00000396344 NRXN3Q9Y4C0 1643 aa23.53■■□□□ 1.36
HOXA10-202ENST00000396344 HIRIP3Q9BW71 556 aaPredicted RBP23.52■■□□□ 1.36
HOXA10-202ENST00000396344 TRPM1Q7Z4N2 1603 aa23.52■■□□□ 1.36
HOXA10-202ENST00000396344 SENP3Q9H4L4 574 aaPredicted RBP23.52■■□□□ 1.36
HOXA10-202ENST00000396344 YTHDC1Q96MU7 727 aaKnown RBP23.51■■□□□ 1.35
HOXA10-202ENST00000396344 HSPA1LP34931 641 aa23.5■■□□□ 1.35
HOXA10-202ENST00000396344 MSH6P52701 1360 aa23.5■■□□□ 1.35
HOXA10-202ENST00000396344 USP47Q96K76 1375 aa23.5■■□□□ 1.35
HOXA10-202ENST00000396344 CCDC7Q96M83 1385 aa23.5■■□□□ 1.35
HOXA10-202ENST00000396344 FAM135BQ49AJ0 1406 aa23.48■■□□□ 1.35
HOXA10-202ENST00000396344 AMOTL2Q9Y2J4 779 aa23.48■■□□□ 1.35
HOXA10-202ENST00000396344 WASHC2AQ641Q2 1341 aa23.47■■□□□ 1.35
HOXA10-202ENST00000396344 PRAG1Q86YV5 1406 aa23.47■■□□□ 1.35
HOXA10-202ENST00000396344 PTPRUQ92729 1446 aa23.47■■□□□ 1.35
HOXA10-202ENST00000396344 STAC3Q96MF2 364 aa23.46■■□□□ 1.35
HOXA10-202ENST00000396344 PPLO60437 1756 aa23.45■■□□□ 1.34
HOXA10-202ENST00000396344 XRN1Q8IZH2 1706 aaKnown RBP23.44■■□□□ 1.34
HOXA10-202ENST00000396344 RBM33Q96EV2 1170 aaKnown RBP23.44■■□□□ 1.34
HOXA10-202ENST00000396344 METP08581 1390 aa23.44■■□□□ 1.34
HOXA10-202ENST00000396344 DCAF11Q8TEB1 546 aa23.43■■□□□ 1.34
HOXA10-202ENST00000396344 C19orf44Q9H6X5 657 aa23.42■■□□□ 1.34
HOXA10-202ENST00000396344 ROCK2O75116 1388 aaKnown RBP23.41■■□□□ 1.34
HOXA10-202ENST00000396344 CARD11Q9BXL7 1154 aa23.4■■□□□ 1.34
HOXA10-202ENST00000396344 SLAIN2Q9P270 581 aa23.39■■□□□ 1.33
HOXA10-202ENST00000396344 GPRASP1Q5JY77 1395 aa23.38■■□□□ 1.33
HOXA10-202ENST00000396344 DCCP43146 1447 aa23.38■■□□□ 1.33
HOXA10-202ENST00000396344 C14orf37Q86TY3 774 aa23.38■■□□□ 1.33
HOXA10-202ENST00000396344 CADPS2Q86UW7 1296 aa23.38■■□□□ 1.33
HOXA10-202ENST00000396344 DISP3Q9P2K9 1392 aa23.38■■□□□ 1.33
HOXA10-202ENST00000396344 SETD1AO15047 1707 aaKnown RBP23.37■■□□□ 1.33
HOXA10-202ENST00000396344 KIAA1210Q9ULL0 1709 aa23.36■■□□□ 1.33
HOXA10-202ENST00000396344 RGL3Q3MIN7 710 aa23.35■■□□□ 1.33
HOXA10-202ENST00000396344 IFT172Q9UG01 1749 aa23.35■■□□□ 1.33
HOXA10-202ENST00000396344 PTCH1Q13635 1447 aa23.34■■□□□ 1.33
HOXA10-202ENST00000396344 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.34■■□□□ 1.33
HOXA10-202ENST00000396344 ATF3P18847 181 aa23.34■■□□□ 1.33
HOXA10-202ENST00000396344 KDM2AQ9Y2K7 1162 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms