RNA–Protein interactions for RNA: ENST00000396189.2

PDE1C-204, Transcript of phosphodiesterase 1C, humanhuman

TSL 5

Gene PDE1C, Length 605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-204ENST00000396189 SPHKAPQ2M3C7 1700 aa29.06■■■□□ 2.24
PDE1C-204ENST00000396189 RIMS2Q9UQ26 1411 aa29.04■■■□□ 2.24
PDE1C-204ENST00000396189 SLC26A8Q96RN1 970 aa29.04■■■□□ 2.24
PDE1C-204ENST00000396189 HDGFP51858 240 aaKnown RBP29.02■■■□□ 2.24
PDE1C-204ENST00000396189 ZFYVE9O95405 1425 aa29.02■■■□□ 2.24
PDE1C-204ENST00000396189 HFM1A2PYH4 1435 aa28.99■■■□□ 2.23
PDE1C-204ENST00000396189 XIRP1Q702N8 1843 aaKnown RBP28.99■■■□□ 2.23
PDE1C-204ENST00000396189 TRIM52Q96A61 297 aa28.98■■■□□ 2.23
PDE1C-204ENST00000396189 PLEKHG1Q9ULL1 1385 aa28.96■■■□□ 2.23
PDE1C-204ENST00000396189 NUTM2DQ5VT03 806 aaPredicted RBP28.95■■■□□ 2.22
PDE1C-204ENST00000396189 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.95■■■□□ 2.22
PDE1C-204ENST00000396189 KCNA6P17658 529 aa28.93■■■□□ 2.22
PDE1C-204ENST00000396189 ALKQ9UM73 1620 aa28.93■■■□□ 2.22
PDE1C-204ENST00000396189 DISP3Q9P2K9 1392 aa28.91■■■□□ 2.22
PDE1C-204ENST00000396189 HSPA1LP34931 641 aa28.89■■■□□ 2.22
PDE1C-204ENST00000396189 PROSER2Q86WR7 435 aaPredicted RBP28.89■■■□□ 2.22
PDE1C-204ENST00000396189 NWD1Q149M9 1564 aa28.88■■■□□ 2.21
PDE1C-204ENST00000396189 CHD2O14647 1828 aaKnown RBP28.88■■■□□ 2.21
PDE1C-204ENST00000396189 KIF1BO60333 1816 aa28.87■■■□□ 2.21
PDE1C-204ENST00000396189 CLTCL1P53675 1640 aa28.87■■■□□ 2.21
PDE1C-204ENST00000396189 ZNF326Q5BKZ1 582 aaKnown RBP28.87■■■□□ 2.21
PDE1C-204ENST00000396189 TMEM94Q12767 1356 aa28.87■■■□□ 2.21
PDE1C-204ENST00000396189 NKTRP30414 1462 aaKnown RBP28.86■■■□□ 2.21
PDE1C-204ENST00000396189 TRPM2O94759 1503 aa28.86■■■□□ 2.21
PDE1C-204ENST00000396189 RBM33Q96EV2 1170 aaKnown RBP28.84■■■□□ 2.21
PDE1C-204ENST00000396189 SLC4A1APQ9BWU0 796 aaKnown RBP28.84■■■□□ 2.21
PDE1C-204ENST00000396189 DIP2AQ14689 1571 aa28.83■■■□□ 2.21
PDE1C-204ENST00000396189 TBX22Q9Y458 520 aa28.82■■■□□ 2.2
PDE1C-204ENST00000396189 ADAMTS13Q76LX8 1427 aa28.8■■■□□ 2.2
PDE1C-204ENST00000396189 MSH6P52701 1360 aa28.75■■■□□ 2.19
PDE1C-204ENST00000396189 NEXMIFQ5QGS0 1516 aa28.72■■■□□ 2.19
PDE1C-204ENST00000396189 PIK3R4Q99570 1358 aa28.72■■■□□ 2.19
PDE1C-204ENST00000396189 NRXN3Q9Y4C0 1643 aa28.72■■■□□ 2.19
PDE1C-204ENST00000396189 C14orf37Q86TY3 774 aa28.71■■■□□ 2.19
PDE1C-204ENST00000396189 SETBP1Q9Y6X0 1596 aa28.71■■■□□ 2.19
PDE1C-204ENST00000396189 FOXD1Q16676 465 aa28.7■■■□□ 2.18
PDE1C-204ENST00000396189 ROBO1Q9Y6N7 1651 aa28.67■■■□□ 2.18
PDE1C-204ENST00000396189 AMOTL2Q9Y2J4 779 aa28.66■■■□□ 2.18
PDE1C-204ENST00000396189 MED1Q15648 1581 aaPredicted RBP28.66■■■□□ 2.18
PDE1C-204ENST00000396189 FAM135BQ49AJ0 1406 aa28.64■■■□□ 2.18
PDE1C-204ENST00000396189 MPHOSPH9Q99550 1183 aa28.64■■■□□ 2.18
PDE1C-204ENST00000396189 PTPRUQ92729 1446 aa28.63■■■□□ 2.17
PDE1C-204ENST00000396189 SETD5Q9C0A6 1442 aa28.63■■■□□ 2.17
PDE1C-204ENST00000396189 ILDR2Q71H61 639 aa28.62■■■□□ 2.17
PDE1C-204ENST00000396189 PPLO60437 1756 aa28.62■■■□□ 2.17
PDE1C-204ENST00000396189 NCOA3Q9Y6Q9 1424 aa28.61■■■□□ 2.17
PDE1C-204ENST00000396189 XRN1Q8IZH2 1706 aaKnown RBP28.61■■■□□ 2.17
PDE1C-204ENST00000396189 CCDC144AA2RUR9 1427 aa28.6■■■□□ 2.17
PDE1C-204ENST00000396189 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.6■■■□□ 2.17
PDE1C-204ENST00000396189 VGFO15240 615 aaPredicted RBP28.59■■■□□ 2.17
PDE1C-204ENST00000396189 SLAIN2Q9P270 581 aa28.59■■■□□ 2.17
PDE1C-204ENST00000396189 METP08581 1390 aa28.59■■■□□ 2.17
PDE1C-204ENST00000396189 RPGRIP1LQ68CZ1 1315 aa28.57■■■□□ 2.16
PDE1C-204ENST00000396189 ACIN1Q9UKV3 1341 aaKnown RBP28.57■■■□□ 2.16
PDE1C-204ENST00000396189 ATF3P18847 181 aa28.55■■■□□ 2.16
PDE1C-204ENST00000396189 C19orf44Q9H6X5 657 aa28.54■■■□□ 2.16
PDE1C-204ENST00000396189 RAB3GAP2Q9H2M9 1393 aa28.53■■■□□ 2.16
PDE1C-204ENST00000396189 PHLPP1O60346 1717 aa28.53■■■□□ 2.16
PDE1C-204ENST00000396189 CADPS2Q86UW7 1296 aa28.53■■■□□ 2.16
PDE1C-204ENST00000396189 PHF23Q9BUL5 403 aaPredicted RBP28.52■■■□□ 2.16
PDE1C-204ENST00000396189 RGL3Q3MIN7 710 aa28.51■■■□□ 2.15
PDE1C-204ENST00000396189 SETD1AO15047 1707 aaKnown RBP28.51■■■□□ 2.15
PDE1C-204ENST00000396189 IFT172Q9UG01 1749 aa28.46■■■□□ 2.15
PDE1C-204ENST00000396189 SPATA31E1Q6ZUB1 1445 aa28.45■■■□□ 2.15
PDE1C-204ENST00000396189 DCCP43146 1447 aa28.43■■■□□ 2.14
PDE1C-204ENST00000396189 NALCNQ8IZF0 1738 aa28.43■■■□□ 2.14
PDE1C-204ENST00000396189 ADGRF5Q8IZF2 1346 aa28.41■■■□□ 2.14
PDE1C-204ENST00000396189 ANKRD30BQ9BXX2 1392 aa28.4■■■□□ 2.14
PDE1C-204ENST00000396189 ADGRL3Q9HAR2 1447 aa28.4■■■□□ 2.14
PDE1C-204ENST00000396189 PTCH1Q13635 1447 aa28.38■■■□□ 2.13
PDE1C-204ENST00000396189 COL16A1Q07092 1604 aaPredicted RBP28.38■■■□□ 2.13
PDE1C-204ENST00000396189 SOCS7O14512 581 aa28.37■■■□□ 2.13
PDE1C-204ENST00000396189 ROBO2Q9HCK4 1378 aa28.36■■■□□ 2.13
PDE1C-204ENST00000396189 AHDC1Q5TGY3 1603 aaPredicted RBP28.35■■■□□ 2.13
PDE1C-204ENST00000396189 MST1RQ04912 1400 aa28.35■■■□□ 2.13
PDE1C-204ENST00000396189 BRINP3Q76B58 766 aa28.34■■■□□ 2.13
PDE1C-204ENST00000396189 JCADQ9P266 1359 aa28.34■■■□□ 2.13
PDE1C-204ENST00000396189 ASXL1Q8IXJ9 1541 aa28.32■■■□□ 2.12
PDE1C-204ENST00000396189 PIK3C2GO75747 1445 aa28.29■■■□□ 2.12
PDE1C-204ENST00000396189 PRAG1Q86YV5 1406 aa28.29■■■□□ 2.12
PDE1C-204ENST00000396189 STK26Q9P289 416 aa28.29■■■□□ 2.12
PDE1C-204ENST00000396189 NHSL1Q5SYE7 1610 aa28.25■■■□□ 2.11
PDE1C-204ENST00000396189 HRCP23327 699 aa28.25■■■□□ 2.11
PDE1C-204ENST00000396189 TMEM132EQ6IEE7 984 aa28.25■■■□□ 2.11
PDE1C-204ENST00000396189 KNDC1Q76NI1 1749 aa28.24■■■□□ 2.11
PDE1C-204ENST00000396189 SHPRHQ149N8 1683 aa28.24■■■□□ 2.11
PDE1C-204ENST00000396189 MYOM2P54296 1465 aa28.23■■■□□ 2.11
PDE1C-204ENST00000396189 LRPPRCP42704 1394 aaKnown RBP28.23■■■□□ 2.11
PDE1C-204ENST00000396189 C1orf167Q5SNV9 1468 aa28.22■■■□□ 2.11
PDE1C-204ENST00000396189 LAMC1P11047 1609 aa28.22■■■□□ 2.11
PDE1C-204ENST00000396189 RGS17Q9UGC6 210 aaPredicted RBP28.2■■■□□ 2.1
PDE1C-204ENST00000396189 SPATA31A6Q5VVP1 1343 aa28.19■■■□□ 2.1
PDE1C-204ENST00000396189 TECPR2O15040 1411 aa28.19■■■□□ 2.1
PDE1C-204ENST00000396189 NRXN1Q9ULB1 1477 aa28.19■■■□□ 2.1
PDE1C-204ENST00000396189 YTHDC2Q9H6S0 1430 aaKnown RBP28.18■■■□□ 2.1
PDE1C-204ENST00000396189 MEX3CQ5U5Q3 659 aaKnown RBP28.18■■■□□ 2.1
PDE1C-204ENST00000396189 WAPLQ7Z5K2 1190 aa28.18■■■□□ 2.1
PDE1C-204ENST00000396189 DDX17Q92841 729 aaKnown RBP28.18■■■□□ 2.1
PDE1C-204ENST00000396189 CDC42BPGQ6DT37 1551 aa28.17■■■□□ 2.1
PDE1C-204ENST00000396189 ABCC11Q96J66 1382 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms