RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 CARD10Q9BWT7 1032 aa5.58□□□□□ -1.52
HERC4-204ENST00000395198 RPGRIP1LQ68CZ1 1315 aa5.58□□□□□ -1.52
HERC4-204ENST00000395198 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.58□□□□□ -1.52
HERC4-204ENST00000395198 GOLGA6CA6NDK9 693 aa5.57□□□□□ -1.52
HERC4-204ENST00000395198 GOLGA6BA6NDN3 693 aa5.57□□□□□ -1.52
HERC4-204ENST00000395198 GOLGA6DP0CG33 693 aa5.57□□□□□ -1.52
HERC4-204ENST00000395198 SCP2P22307 547 aa5.57□□□□□ -1.52
HERC4-204ENST00000395198 GYS2P54840 703 aa5.57□□□□□ -1.52
HERC4-204ENST00000395198 GOLGA6AQ9NYA3 693 aa5.57□□□□□ -1.52
HERC4-204ENST00000395198 PPP4CP60510 307 aa5.57□□□□□ -1.52
HERC4-204ENST00000395198 PDE4DQ08499 809 aa5.57□□□□□ -1.52
HERC4-204ENST00000395198 KCNA1Q09470 495 aa5.57□□□□□ -1.52
HERC4-204ENST00000395198 DDX46Q7L014 1031 aaKnown RBP5.57□□□□□ -1.52
HERC4-204ENST00000395198 SPOCK3Q9BQ16 436 aa5.57□□□□□ -1.52
HERC4-204ENST00000395198 NRBP1Q9UHY1 535 aa5.57□□□□□ -1.52
HERC4-204ENST00000395198 DHX16O60231 1041 aaKnown RBP5.56□□□□□ -1.52
HERC4-204ENST00000395198 RTL5Q5HYW3 569 aaPredicted RBP5.56□□□□□ -1.52
HERC4-204ENST00000395198 ZNF280DQ6N043 979 aa5.56□□□□□ -1.52
HERC4-204ENST00000395198 TCF3P15923 654 aa5.56□□□□□ -1.52
HERC4-204ENST00000395198 AK7Q96M32 723 aa5.56□□□□□ -1.52
HERC4-204ENST00000395198 C11orf96Q7Z7L8 435 aa5.56□□□□□ -1.52
HERC4-204ENST00000395198 AXDND1Q5T1B0 1012 aaPredicted RBP5.56□□□□□ -1.52
HERC4-204ENST00000395198 DPH6Q7L8W6 267 aa5.56□□□□□ -1.52
HERC4-204ENST00000395198 C8orf37Q96NL8 207 aa5.56□□□□□ -1.52
HERC4-204ENST00000395198 FAN1Q9Y2M0 1017 aa5.56□□□□□ -1.52
HERC4-204ENST00000395198 TRIM66O15016 1216 aa5.55□□□□□ -1.52
HERC4-204ENST00000395198 ARHGEF10LQ9HCE6 1279 aa5.55□□□□□ -1.52
HERC4-204ENST00000395198 GNL3LQ9NVN8 582 aaKnown RBP5.55□□□□□ -1.52
HERC4-204ENST00000395198 TMEM51Q9NW97 253 aa5.55□□□□□ -1.52
HERC4-204ENST00000395198 OTUD6BQ8N6M0 293 aa5.55□□□□□ -1.52
HERC4-204ENST00000395198 UBXN4Q92575 508 aa5.55□□□□□ -1.52
HERC4-204ENST00000395198 EVA1CP58658 441 aa5.54□□□□□ -1.52
HERC4-204ENST00000395198 CCDC181Q5TID7 509 aa5.54□□□□□ -1.52
HERC4-204ENST00000395198 SH3BP5O60239 455 aa5.54□□□□□ -1.52
HERC4-204ENST00000395198 ZNF500O60304 480 aaPredicted RBP5.54□□□□□ -1.52
HERC4-204ENST00000395198 CFAP69A5D8W1 941 aa5.54□□□□□ -1.52
HERC4-204ENST00000395198 ARID4AP29374 1257 aaPredicted RBP5.54□□□□□ -1.52
HERC4-204ENST00000395198 C4orf46Q504U0 113 aa5.53□□□□□ -1.52
HERC4-204ENST00000395198 CREBRFQ8IUR6 639 aa5.53□□□□□ -1.52
HERC4-204ENST00000395198 MAGEC2Q9UBF1 373 aaPredicted RBP5.53□□□□□ -1.52
HERC4-204ENST00000395198 ZNF16P17020 682 aaPredicted RBP5.53□□□□□ -1.52
HERC4-204ENST00000395198 CASC1Q6TDU7 716 aa5.53□□□□□ -1.52
HERC4-204ENST00000395198 CIZ1Q9ULV3 898 aaPredicted RBP5.53□□□□□ -1.52
HERC4-204ENST00000395198 CSPP1Q1MSJ5 1256 aa5.52□□□□□ -1.53
HERC4-204ENST00000395198 TSR1Q2NL82 804 aaKnown RBP5.52□□□□□ -1.53
HERC4-204ENST00000395198 ZKSCAN2Q63HK3 967 aa5.52□□□□□ -1.53
HERC4-204ENST00000395198 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.52□□□□□ -1.531e-6■■■■■ 140.1
HERC4-204ENST00000395198 BICRAQ9NZM4 1560 aa5.52□□□□□ -1.53
HERC4-204ENST00000395198 IRX3P78415 501 aaPredicted RBP5.52□□□□□ -1.53
HERC4-204ENST00000395198 METTL14Q9HCE5 456 aaKnown RBP5.52□□□□□ -1.53
HERC4-204ENST00000395198 CXorf38Q8TB03 319 aa5.51□□□□□ -1.53
HERC4-204ENST00000395198 BORCS6Q96GS4 357 aa5.51□□□□□ -1.53
HERC4-204ENST00000395198 SPACA7Q96KW9 195 aa5.51□□□□□ -1.53
HERC4-204ENST00000395198 RB1CC1Q8TDY2 1594 aa5.51□□□□□ -1.53
HERC4-204ENST00000395198 RRP9O43818 475 aaKnown RBP5.51□□□□□ -1.53
HERC4-204ENST00000395198 EGFLAMQ63HQ2 1017 aa5.51□□□□□ -1.53
HERC4-204ENST00000395198 MKL1Q969V6 931 aa5.51□□□□□ -1.53
HERC4-204ENST00000395198 CHPF2Q9P2E5 772 aa5.51□□□□□ -1.53
HERC4-204ENST00000395198 NLGN1Q8N2Q7 840 aa5.51□□□□□ -1.53
HERC4-204ENST00000395198 MKRN4PQ13434 485 aaPredicted RBP5.5□□□□□ -1.53
HERC4-204ENST00000395198 CEP120Q8N960 986 aa5.5□□□□□ -1.53
HERC4-204ENST00000395198 NUB1Q9Y5A7 615 aa5.5□□□□□ -1.53
HERC4-204ENST00000395198 PDE6BP35913 854 aa5.5□□□□□ -1.53
HERC4-204ENST00000395198 APPP05067 770 aa5.49□□□□□ -1.53
HERC4-204ENST00000395198 NAALADL2Q58DX5 795 aa5.49□□□□□ -1.53
HERC4-204ENST00000395198 NBPF9Q3BBW0 867 aa5.49□□□□□ -1.53
HERC4-204ENST00000395198 RGS3P49796 1198 aa5.49□□□□□ -1.53
HERC4-204ENST00000395198 HELBQ8NG08 1087 aaPredicted RBP5.49□□□□□ -1.53
HERC4-204ENST00000395198 KAT6BQ8WYB5 2073 aa5.49□□□□□ -1.53
HERC4-204ENST00000395198 ANKRD23Q86SG2 305 aa5.49□□□□□ -1.53
HERC4-204ENST00000395198 IRF2BPLQ9H1B7 796 aa5.49□□□□□ -1.53
HERC4-204ENST00000395198 LIG1P18858 919 aa5.48□□□□□ -1.53
HERC4-204ENST00000395198 ZNF513Q8N8E2 541 aaPredicted RBP5.48□□□□□ -1.53
HERC4-204ENST00000395198 CTDP1Q9Y5B0 961 aaPredicted RBP5.48□□□□□ -1.53
HERC4-204ENST00000395198 CCDC189A1A4V9 331 aa5.48□□□□□ -1.53
HERC4-204ENST00000395198 CALD1Q05682 793 aaKnown RBP5.48□□□□□ -1.53
HERC4-204ENST00000395198 ATP1B4Q9UN42 357 aaPredicted RBP5.48□□□□□ -1.53
HERC4-204ENST00000395198 NGEFQ8N5V2 710 aa5.48□□□□□ -1.53
HERC4-204ENST00000395198 GOLIM4O00461 696 aa5.47□□□□□ -1.53
HERC4-204ENST00000395198 ZC3H6P61129 1189 aaKnown RBP5.47□□□□□ -1.53
HERC4-204ENST00000395198 PUS10Q3MIT2 529 aaKnown RBP5.47□□□□□ -1.53
HERC4-204ENST00000395198 TTC30BQ8N4P2 665 aa5.47□□□□□ -1.53
HERC4-204ENST00000395198 KLF15Q9UIH9 416 aa5.47□□□□□ -1.53
HERC4-204ENST00000395198 AMOTL1Q8IY63 956 aa5.47□□□□□ -1.53
HERC4-204ENST00000395198 MSL3Q8N5Y2 521 aaKnown RBP5.47□□□□□ -1.53
HERC4-204ENST00000395198 PRR12Q9ULL5 1215 aa5.47□□□□□ -1.53
HERC4-204ENST00000395198 PDZRN3Q9UPQ7 1066 aa5.47□□□□□ -1.53
HERC4-204ENST00000395198 MTA1Q13330 715 aa5.47□□□□□ -1.53
HERC4-204ENST00000395198 CCER1Q8TC90 406 aaPredicted RBP5.47□□□□□ -1.53
HERC4-204ENST00000395198 MAP3K20Q9NYL2 800 aaKnown RBP5.47□□□□□ -1.53
HERC4-204ENST00000395198 VGLL3A8MV65 326 aa5.47□□□□□ -1.53
HERC4-204ENST00000395198 STK10O94804 968 aaKnown RBP5.47□□□□□ -1.53
HERC4-204ENST00000395198 FBXO9Q9UK97 447 aaPredicted RBP5.47□□□□□ -1.53
HERC4-204ENST00000395198 COMMD10Q9Y6G5 202 aa5.47□□□□□ -1.53
HERC4-204ENST00000395198 WDHD1O75717 1129 aaPredicted RBP5.46□□□□□ -1.53
HERC4-204ENST00000395198 RPUSD2Q8IZ73 545 aaKnown RBP5.46□□□□□ -1.53
HERC4-204ENST00000395198 PROCA1Q8NCQ7 364 aaPredicted RBP5.46□□□□□ -1.53
HERC4-204ENST00000395198 STAG1Q8WVM7 1258 aa5.46□□□□□ -1.53
HERC4-204ENST00000395198 LNPKQ9C0E8 428 aa5.46□□□□□ -1.53
HERC4-204ENST00000395198 FRMD4BQ9Y2L6 1034 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms