RNA–Protein interactions for RNA: ENST00000394921.8

PMS2P3-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 2

Gene PMS2P3, Length 1,316 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-201ENST00000394921 CHGAP10645 457 aaKnown RBP34.79■■■■□ 3.16
PMS2P3-201ENST00000394921 XIRP1Q702N8 1843 aaKnown RBP34.78■■■■□ 3.16
PMS2P3-201ENST00000394921 PLEKHG1Q9ULL1 1385 aa34.77■■■■□ 3.16
PMS2P3-201ENST00000394921 PIP4K2BP78356 416 aa34.77■■■■□ 3.16
PMS2P3-201ENST00000394921 KCNA6P17658 529 aa34.74■■■■□ 3.15
PMS2P3-201ENST00000394921 SCAF1Q9H7N4 1312 aaKnown RBP34.73■■■■□ 3.15
PMS2P3-201ENST00000394921 HDGFP51858 240 aaKnown RBP34.73■■■■□ 3.15
PMS2P3-201ENST00000394921 NWD1Q149M9 1564 aa34.7■■■■□ 3.15
PMS2P3-201ENST00000394921 PPP1R15AO75807 674 aaPredicted RBP34.7■■■■□ 3.15
PMS2P3-201ENST00000394921 SENP3Q9H4L4 574 aaPredicted RBP34.7■■■■□ 3.15
PMS2P3-201ENST00000394921 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.69■■■■□ 3.14
PMS2P3-201ENST00000394921 BCANQ96GW7 911 aa34.69■■■■□ 3.14
PMS2P3-201ENST00000394921 HSPA1LP34931 641 aa34.67■■■■□ 3.14
PMS2P3-201ENST00000394921 NUTM2DQ5VT03 806 aaPredicted RBP34.66■■■■□ 3.14
PMS2P3-201ENST00000394921 TMEM94Q12767 1356 aa34.65■■■■□ 3.14
PMS2P3-201ENST00000394921 TRPM2O94759 1503 aa34.64■■■■□ 3.14
PMS2P3-201ENST00000394921 NKTRP30414 1462 aaKnown RBP34.64■■■■□ 3.14
PMS2P3-201ENST00000394921 CHD2O14647 1828 aaKnown RBP34.64■■■■□ 3.14
PMS2P3-201ENST00000394921 CLTCL1P53675 1640 aa34.63■■■■□ 3.13
PMS2P3-201ENST00000394921 ADAMTS13Q76LX8 1427 aa34.63■■■■□ 3.13
PMS2P3-201ENST00000394921 TRIM52Q96A61 297 aa34.62■■■■□ 3.13
PMS2P3-201ENST00000394921 TBX22Q9Y458 520 aa34.61■■■■□ 3.13
PMS2P3-201ENST00000394921 DISP3Q9P2K9 1392 aa34.61■■■■□ 3.13
PMS2P3-201ENST00000394921 PROSER2Q86WR7 435 aaPredicted RBP34.59■■■■□ 3.13
PMS2P3-201ENST00000394921 DIP2AQ14689 1571 aa34.57■■■■□ 3.12
PMS2P3-201ENST00000394921 RBM33Q96EV2 1170 aaKnown RBP34.56■■■■□ 3.12
PMS2P3-201ENST00000394921 SLC4A1APQ9BWU0 796 aaKnown RBP34.53■■■■□ 3.12
PMS2P3-201ENST00000394921 NRXN3Q9Y4C0 1643 aa34.51■■■■□ 3.12
PMS2P3-201ENST00000394921 KIF1BO60333 1816 aa34.51■■■■□ 3.11
PMS2P3-201ENST00000394921 ZNF326Q5BKZ1 582 aaKnown RBP34.5■■■■□ 3.11
PMS2P3-201ENST00000394921 PIK3R4Q99570 1358 aa34.5■■■■□ 3.11
PMS2P3-201ENST00000394921 NEXMIFQ5QGS0 1516 aa34.49■■■■□ 3.11
PMS2P3-201ENST00000394921 SETBP1Q9Y6X0 1596 aa34.48■■■■□ 3.11
PMS2P3-201ENST00000394921 PTPRUQ92729 1446 aa34.44■■■■□ 3.1
PMS2P3-201ENST00000394921 FAM135BQ49AJ0 1406 aa34.43■■■■□ 3.1
PMS2P3-201ENST00000394921 MSH6P52701 1360 aa34.41■■■■□ 3.1
PMS2P3-201ENST00000394921 ILDR2Q71H61 639 aa34.4■■■■□ 3.1
PMS2P3-201ENST00000394921 FOXD1Q16676 465 aa34.39■■■■□ 3.1
PMS2P3-201ENST00000394921 NCOA3Q9Y6Q9 1424 aa34.39■■■■□ 3.1
PMS2P3-201ENST00000394921 MED1Q15648 1581 aaPredicted RBP34.38■■■■□ 3.09
PMS2P3-201ENST00000394921 AMOTL2Q9Y2J4 779 aa34.36■■■■□ 3.09
PMS2P3-201ENST00000394921 XRN1Q8IZH2 1706 aaKnown RBP34.35■■■■□ 3.09
PMS2P3-201ENST00000394921 MPHOSPH9Q99550 1183 aa34.35■■■■□ 3.09
PMS2P3-201ENST00000394921 ROBO1Q9Y6N7 1651 aa34.35■■■■□ 3.09
PMS2P3-201ENST00000394921 METP08581 1390 aa34.34■■■■□ 3.09
PMS2P3-201ENST00000394921 SETD5Q9C0A6 1442 aa34.33■■■■□ 3.09
PMS2P3-201ENST00000394921 SLAIN2Q9P270 581 aa34.3■■■■□ 3.08
PMS2P3-201ENST00000394921 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.29■■■■□ 3.08
PMS2P3-201ENST00000394921 PPLO60437 1756 aa34.28■■■■□ 3.08
PMS2P3-201ENST00000394921 RPGRIP1LQ68CZ1 1315 aa34.28■■■■□ 3.08
PMS2P3-201ENST00000394921 VGFO15240 615 aaPredicted RBP34.26■■■■□ 3.07
PMS2P3-201ENST00000394921 C14orf37Q86TY3 774 aa34.26■■■■□ 3.07
PMS2P3-201ENST00000394921 SETD1AO15047 1707 aaKnown RBP34.25■■■■□ 3.07
PMS2P3-201ENST00000394921 CCDC144AA2RUR9 1427 aa34.25■■■■□ 3.07
PMS2P3-201ENST00000394921 C19orf44Q9H6X5 657 aa34.24■■■■□ 3.07
PMS2P3-201ENST00000394921 ACIN1Q9UKV3 1341 aaKnown RBP34.23■■■■□ 3.07
PMS2P3-201ENST00000394921 SPATA31E1Q6ZUB1 1445 aa34.22■■■■□ 3.07
PMS2P3-201ENST00000394921 RAB3GAP2Q9H2M9 1393 aa34.21■■■■□ 3.07
PMS2P3-201ENST00000394921 CADPS2Q86UW7 1296 aa34.19■■■■□ 3.06
PMS2P3-201ENST00000394921 ATF3P18847 181 aa34.15■■■■□ 3.06
PMS2P3-201ENST00000394921 IFT172Q9UG01 1749 aa34.14■■■■□ 3.06
PMS2P3-201ENST00000394921 DCCP43146 1447 aa34.14■■■■□ 3.06
PMS2P3-201ENST00000394921 PHLPP1O60346 1717 aa34.13■■■■□ 3.05
PMS2P3-201ENST00000394921 RGL3Q3MIN7 710 aa34.11■■■■□ 3.05
PMS2P3-201ENST00000394921 ADGRF5Q8IZF2 1346 aa34.1■■■■□ 3.05
PMS2P3-201ENST00000394921 PTCH1Q13635 1447 aa34.09■■■■□ 3.05
PMS2P3-201ENST00000394921 PRAG1Q86YV5 1406 aa34.09■■■■□ 3.05
PMS2P3-201ENST00000394921 ADGRL3Q9HAR2 1447 aa34.09■■■■□ 3.05
PMS2P3-201ENST00000394921 NALCNQ8IZF0 1738 aa34.08■■■■□ 3.05
PMS2P3-201ENST00000394921 COL16A1Q07092 1604 aaPredicted RBP34.07■■■■□ 3.05
PMS2P3-201ENST00000394921 ANKRD30BQ9BXX2 1392 aa34.07■■■■□ 3.04
PMS2P3-201ENST00000394921 SOCS7O14512 581 aa34.06■■■■□ 3.04
PMS2P3-201ENST00000394921 ROBO2Q9HCK4 1378 aa34.06■■■■□ 3.04
PMS2P3-201ENST00000394921 PHF23Q9BUL5 403 aaPredicted RBP34.04■■■■□ 3.04
PMS2P3-201ENST00000394921 AHDC1Q5TGY3 1603 aaPredicted RBP34.04■■■■□ 3.04
PMS2P3-201ENST00000394921 MST1RQ04912 1400 aa34.04■■■■□ 3.04
PMS2P3-201ENST00000394921 BRINP3Q76B58 766 aa34.02■■■■□ 3.04
PMS2P3-201ENST00000394921 JCADQ9P266 1359 aa33.99■■■■□ 3.03
PMS2P3-201ENST00000394921 ASXL1Q8IXJ9 1541 aa33.97■■■■□ 3.03
PMS2P3-201ENST00000394921 PIK3C2GO75747 1445 aa33.97■■■■□ 3.03
PMS2P3-201ENST00000394921 HRCP23327 699 aa33.97■■■■□ 3.03
PMS2P3-201ENST00000394921 RGS17Q9UGC6 210 aaPredicted RBP33.95■■■■□ 3.03
PMS2P3-201ENST00000394921 NRXN1Q9ULB1 1477 aa33.91■■■■□ 3.02
PMS2P3-201ENST00000394921 NHSL1Q5SYE7 1610 aa33.91■■■■□ 3.02
PMS2P3-201ENST00000394921 TECPR2O15040 1411 aa33.9■■■■□ 3.02
PMS2P3-201ENST00000394921 MYOM2P54296 1465 aa33.9■■■■□ 3.02
PMS2P3-201ENST00000394921 LRPPRCP42704 1394 aaKnown RBP33.89■■■■□ 3.02
PMS2P3-201ENST00000394921 C1orf167Q5SNV9 1468 aa33.88■■■■□ 3.01
PMS2P3-201ENST00000394921 TMEM132EQ6IEE7 984 aa33.87■■■■□ 3.01
PMS2P3-201ENST00000394921 SHPRHQ149N8 1683 aa33.87■■■■□ 3.01
PMS2P3-201ENST00000394921 KNDC1Q76NI1 1749 aa33.86■■■■□ 3.01
PMS2P3-201ENST00000394921 ABCC11Q96J66 1382 aa33.85■■■■□ 3.01
PMS2P3-201ENST00000394921 STK26Q9P289 416 aa33.85■■■■□ 3.01
PMS2P3-201ENST00000394921 C14orf93Q9H972 538 aaKnown RBP33.83■■■■□ 3.01
PMS2P3-201ENST00000394921 LRP6O75581 1613 aa33.82■■■■□ 3
PMS2P3-201ENST00000394921 YTHDC2Q9H6S0 1430 aaKnown RBP33.81■■■■□ 3
PMS2P3-201ENST00000394921 CDC42BPGQ6DT37 1551 aa33.81■■■■□ 3
PMS2P3-201ENST00000394921 SPATA31A6Q5VVP1 1343 aa33.81■■■■□ 3
PMS2P3-201ENST00000394921 DDX17Q92841 729 aaKnown RBP33.8■■■■□ 3
PMS2P3-201ENST00000394921 WAPLQ7Z5K2 1190 aa33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms