RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 PLEKHG1Q9ULL1 1385 aa19.04■□□□□ 0.64
CTSC-202ENST00000393301 CHD2O14647 1828 aaKnown RBP19.03■□□□□ 0.64
CTSC-202ENST00000393301 KCNA6P17658 529 aa19.03■□□□□ 0.64
CTSC-202ENST00000393301 FAM135BQ49AJ0 1406 aa19.01■□□□□ 0.63
CTSC-202ENST00000393301 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
CTSC-202ENST00000393301 DIP2AQ14689 1571 aa19■□□□□ 0.63
CTSC-202ENST00000393301 RIMS2Q9UQ26 1411 aa19■□□□□ 0.63
CTSC-202ENST00000393301 TMEM94Q12767 1356 aa18.99■□□□□ 0.63
CTSC-202ENST00000393301 RRBP1Q9P2E9 1410 aaKnown RBP18.97■□□□□ 0.63
CTSC-202ENST00000393301 NCOA3Q9Y6Q9 1424 aa18.97■□□□□ 0.63
CTSC-202ENST00000393301 HDGFP51858 240 aaKnown RBP18.95■□□□□ 0.62
CTSC-202ENST00000393301 PIK3R4Q99570 1358 aa18.94■□□□□ 0.62
CTSC-202ENST00000393301 SPHKAPQ2M3C7 1700 aa18.94■□□□□ 0.62
CTSC-202ENST00000393301 ADAMTS13Q76LX8 1427 aa18.94■□□□□ 0.62
CTSC-202ENST00000393301 SLC26A8Q96RN1 970 aa18.94■□□□□ 0.62
CTSC-202ENST00000393301 NUP155O75694 1391 aa18.93■□□□□ 0.62
CTSC-202ENST00000393301 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.93■□□□□ 0.62
CTSC-202ENST00000393301 TBX22Q9Y458 520 aa18.93■□□□□ 0.62
CTSC-202ENST00000393301 ROBO1Q9Y6N7 1651 aa18.92■□□□□ 0.62
CTSC-202ENST00000393301 PROSER2Q86WR7 435 aaPredicted RBP18.89■□□□□ 0.61
CTSC-202ENST00000393301 SETBP1Q9Y6X0 1596 aa18.89■□□□□ 0.61
CTSC-202ENST00000393301 NRXN3Q9Y4C0 1643 aa18.89■□□□□ 0.61
CTSC-202ENST00000393301 MSH6P52701 1360 aa18.88■□□□□ 0.61
CTSC-202ENST00000393301 TRPM2O94759 1503 aa18.87■□□□□ 0.61
CTSC-202ENST00000393301 NAIPQ13075 1403 aa18.86■□□□□ 0.61
CTSC-202ENST00000393301 XRN1Q8IZH2 1706 aaKnown RBP18.86■□□□□ 0.61
CTSC-202ENST00000393301 PPP1R15AO75807 674 aaPredicted RBP18.85■□□□□ 0.61
CTSC-202ENST00000393301 CLTCL1P53675 1640 aa18.82■□□□□ 0.6
CTSC-202ENST00000393301 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.82■□□□□ 0.6
CTSC-202ENST00000393301 HFM1A2PYH4 1435 aa18.82■□□□□ 0.6
CTSC-202ENST00000393301 NEXMIFQ5QGS0 1516 aa18.81■□□□□ 0.6
CTSC-202ENST00000393301 DCCP43146 1447 aa18.81■□□□□ 0.6
CTSC-202ENST00000393301 COL16A1Q07092 1604 aaPredicted RBP18.8■□□□□ 0.6
CTSC-202ENST00000393301 PTPRUQ92729 1446 aa18.8■□□□□ 0.6
CTSC-202ENST00000393301 PHLPP1O60346 1717 aa18.8■□□□□ 0.6
CTSC-202ENST00000393301 KIF1BO60333 1816 aa18.79■□□□□ 0.6
CTSC-202ENST00000393301 AHDC1Q5TGY3 1603 aaPredicted RBP18.79■□□□□ 0.6
CTSC-202ENST00000393301 BCANQ96GW7 911 aa18.79■□□□□ 0.6
CTSC-202ENST00000393301 SLAIN2Q9P270 581 aa18.79■□□□□ 0.6
CTSC-202ENST00000393301 CHGAP10645 457 aaKnown RBP18.78■□□□□ 0.6
CTSC-202ENST00000393301 ITGAEP38570 1179 aa18.78■□□□□ 0.6
CTSC-202ENST00000393301 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
CTSC-202ENST00000393301 RBM33Q96EV2 1170 aaKnown RBP18.77■□□□□ 0.6
CTSC-202ENST00000393301 PRAG1Q86YV5 1406 aa18.76■□□□□ 0.59
CTSC-202ENST00000393301 RGS17Q9UGC6 210 aaPredicted RBP18.76■□□□□ 0.59
CTSC-202ENST00000393301 SETD1AO15047 1707 aaKnown RBP18.75■□□□□ 0.59
CTSC-202ENST00000393301 C19orf44Q9H6X5 657 aa18.75■□□□□ 0.59
CTSC-202ENST00000393301 JCADQ9P266 1359 aa18.74■□□□□ 0.59
CTSC-202ENST00000393301 CADPS2Q86UW7 1296 aa18.74■□□□□ 0.59
CTSC-202ENST00000393301 PPARGC1BQ86YN6 1023 aaKnown RBP18.74■□□□□ 0.59
CTSC-202ENST00000393301 SHPRHQ149N8 1683 aa18.73■□□□□ 0.59
CTSC-202ENST00000393301 AMOTL2Q9Y2J4 779 aa18.72■□□□□ 0.59
CTSC-202ENST00000393301 NUTM2DQ5VT03 806 aaPredicted RBP18.71■□□□□ 0.59
CTSC-202ENST00000393301 METP08581 1390 aa18.69■□□□□ 0.58
CTSC-202ENST00000393301 SENP3Q9H4L4 574 aaPredicted RBP18.69■□□□□ 0.58
CTSC-202ENST00000393301 PPLO60437 1756 aa18.68■□□□□ 0.58
CTSC-202ENST00000393301 PTCH1Q13635 1447 aa18.68■□□□□ 0.58
CTSC-202ENST00000393301 ADGRL3Q9HAR2 1447 aa18.68■□□□□ 0.58
CTSC-202ENST00000393301 NHSL1Q5SYE7 1610 aa18.68■□□□□ 0.58
CTSC-202ENST00000393301 MST1RQ04912 1400 aa18.67■□□□□ 0.58
CTSC-202ENST00000393301 NALCNQ8IZF0 1738 aa18.67■□□□□ 0.58
CTSC-202ENST00000393301 ATF3P18847 181 aa18.66■□□□□ 0.58
CTSC-202ENST00000393301 SPATA31A6Q5VVP1 1343 aa18.66■□□□□ 0.58
CTSC-202ENST00000393301 RPGRIP1LQ68CZ1 1315 aa18.66■□□□□ 0.58
CTSC-202ENST00000393301 LAMC1P11047 1609 aa18.66■□□□□ 0.58
CTSC-202ENST00000393301 ASXL1Q8IXJ9 1541 aa18.65■□□□□ 0.58
CTSC-202ENST00000393301 ZNF326Q5BKZ1 582 aaKnown RBP18.65■□□□□ 0.58
CTSC-202ENST00000393301 SETD5Q9C0A6 1442 aa18.64■□□□□ 0.57
CTSC-202ENST00000393301 LRP6O75581 1613 aa18.63■□□□□ 0.57
CTSC-202ENST00000393301 BRINP3Q76B58 766 aa18.63■□□□□ 0.57
CTSC-202ENST00000393301 C14orf37Q86TY3 774 aa18.63■□□□□ 0.57
CTSC-202ENST00000393301 IFT172Q9UG01 1749 aa18.61■□□□□ 0.57
CTSC-202ENST00000393301 VGFO15240 615 aaPredicted RBP18.61■□□□□ 0.57
CTSC-202ENST00000393301 POTEAQ6S8J7 498 aa18.61■□□□□ 0.57
CTSC-202ENST00000393301 SLC4A1APQ9BWU0 796 aaKnown RBP18.6■□□□□ 0.57
CTSC-202ENST00000393301 SPATA31E1Q6ZUB1 1445 aa18.58■□□□□ 0.57
CTSC-202ENST00000393301 ACIN1Q9UKV3 1341 aaKnown RBP18.57■□□□□ 0.56
CTSC-202ENST00000393301 TRIM52Q96A61 297 aa18.56■□□□□ 0.56
CTSC-202ENST00000393301 TECPR2O15040 1411 aa18.56■□□□□ 0.56
CTSC-202ENST00000393301 C1orf167Q5SNV9 1468 aa18.55■□□□□ 0.56
CTSC-202ENST00000393301 ROBO2Q9HCK4 1378 aa18.55■□□□□ 0.56
CTSC-202ENST00000393301 KNDC1Q76NI1 1749 aa18.54■□□□□ 0.56
CTSC-202ENST00000393301 CCDC144AA2RUR9 1427 aa18.54■□□□□ 0.56
CTSC-202ENST00000393301 CDC42BPGQ6DT37 1551 aa18.54■□□□□ 0.56
CTSC-202ENST00000393301 ANKRD30BQ9BXX2 1392 aa18.52■□□□□ 0.55
CTSC-202ENST00000393301 CDK12Q9NYV4 1490 aaPredicted RBP18.5■□□□□ 0.55
CTSC-202ENST00000393301 ZNF772Q68DY9 489 aaPredicted RBP18.49■□□□□ 0.55
CTSC-202ENST00000393301 LRRC59Q96AG4 307 aaKnown RBP18.49■□□□□ 0.55
CTSC-202ENST00000393301 PNPLA6Q8IY17 1366 aa18.49■□□□□ 0.55
CTSC-202ENST00000393301 PIK3C2GO75747 1445 aa18.49■□□□□ 0.55
CTSC-202ENST00000393301 MPHOSPH9Q99550 1183 aa18.48■□□□□ 0.55
CTSC-202ENST00000393301 NRXN1Q9ULB1 1477 aa18.47■□□□□ 0.55
CTSC-202ENST00000393301 COL22A1Q8NFW1 1626 aaPredicted RBP18.47■□□□□ 0.55
CTSC-202ENST00000393301 SOS2Q07890 1332 aaPredicted RBP18.47■□□□□ 0.55
CTSC-202ENST00000393301 ADGRF5Q8IZF2 1346 aa18.46■□□□□ 0.55
CTSC-202ENST00000393301 LRPPRCP42704 1394 aaKnown RBP18.45■□□□□ 0.54
CTSC-202ENST00000393301 ABCC11Q96J66 1382 aa18.45■□□□□ 0.54
CTSC-202ENST00000393301 MYOM2P54296 1465 aa18.45■□□□□ 0.54
CTSC-202ENST00000393301 FOXD1Q16676 465 aa18.44■□□□□ 0.54
CTSC-202ENST00000393301 MEX3CQ5U5Q3 659 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms