RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 ZFYVE9O95405 1425 aa30.59■■■□□ 2.49
CDCA4-202ENST00000392590 CLTCL1P53675 1640 aa30.58■■■□□ 2.49
CDCA4-202ENST00000392590 BCANQ96GW7 911 aa30.57■■■□□ 2.49
CDCA4-202ENST00000392590 NUTM2DQ5VT03 806 aaPredicted RBP30.57■■■□□ 2.48
CDCA4-202ENST00000392590 IQGAP1P46940 1657 aa30.56■■■□□ 2.48
CDCA4-202ENST00000392590 CERKQ8TCT0 537 aa30.56■■■□□ 2.48
CDCA4-202ENST00000392590 CCDC144AA2RUR9 1427 aa30.55■■■□□ 2.48
CDCA4-202ENST00000392590 MYO5BQ9ULV0 1848 aa30.53■■■□□ 2.48
CDCA4-202ENST00000392590 SENP3Q9H4L4 574 aaPredicted RBP30.52■■■□□ 2.48
CDCA4-202ENST00000392590 SLC26A8Q96RN1 970 aa30.51■■■□□ 2.47
CDCA4-202ENST00000392590 PLEKHG1Q9ULL1 1385 aa30.5■■■□□ 2.47
CDCA4-202ENST00000392590 LTBP4Q8N2S1 1624 aa30.5■■■□□ 2.47
CDCA4-202ENST00000392590 RPGRIP1LQ68CZ1 1315 aa30.44■■■□□ 2.46
CDCA4-202ENST00000392590 KIF1BO60333 1816 aa30.44■■■□□ 2.46
CDCA4-202ENST00000392590 ANKRD30BQ9BXX2 1392 aa30.44■■■□□ 2.46
CDCA4-202ENST00000392590 RGL3Q3MIN7 710 aa30.42■■■□□ 2.46
CDCA4-202ENST00000392590 TBX22Q9Y458 520 aa30.41■■■□□ 2.46
CDCA4-202ENST00000392590 VGFO15240 615 aaPredicted RBP30.4■■■□□ 2.46
CDCA4-202ENST00000392590 NEXMIFQ5QGS0 1516 aa30.38■■■□□ 2.45
CDCA4-202ENST00000392590 SPATA31E1Q6ZUB1 1445 aa30.38■■■□□ 2.45
CDCA4-202ENST00000392590 CPS1P31327 1500 aa30.37■■■□□ 2.45
CDCA4-202ENST00000392590 KCNA6P17658 529 aa30.36■■■□□ 2.45
CDCA4-202ENST00000392590 ADAMTS13Q76LX8 1427 aa30.34■■■□□ 2.45
CDCA4-202ENST00000392590 FBXO41Q8TF61 875 aa30.34■■■□□ 2.45
CDCA4-202ENST00000392590 IQSEC2Q5JU85 1478 aa30.3■■■□□ 2.44
CDCA4-202ENST00000392590 ILDR1Q86SU0 546 aaPredicted RBP30.27■■■□□ 2.44
CDCA4-202ENST00000392590 DIP2AQ14689 1571 aa30.26■■■□□ 2.43
CDCA4-202ENST00000392590 SETBP1Q9Y6X0 1596 aa30.26■■■□□ 2.43
CDCA4-202ENST00000392590 PIK3R4Q99570 1358 aa30.25■■■□□ 2.43
CDCA4-202ENST00000392590 STRCP1A6NGW2 1772 aa30.25■■■□□ 2.43
CDCA4-202ENST00000392590 ADGRF5Q8IZF2 1346 aa30.25■■■□□ 2.43
CDCA4-202ENST00000392590 LRRC7Q96NW7 1537 aa30.25■■■□□ 2.43
CDCA4-202ENST00000392590 PROSER2Q86WR7 435 aaPredicted RBP30.23■■■□□ 2.43
CDCA4-202ENST00000392590 NRXN3Q9Y4C0 1643 aa30.21■■■□□ 2.43
CDCA4-202ENST00000392590 PCGF6Q9BYE7 350 aa30.21■■■□□ 2.43
CDCA4-202ENST00000392590 AMOTL2Q9Y2J4 779 aa30.21■■■□□ 2.43
CDCA4-202ENST00000392590 PPLO60437 1756 aa30.2■■■□□ 2.43
CDCA4-202ENST00000392590 METP08581 1390 aa30.2■■■□□ 2.42
CDCA4-202ENST00000392590 UBAP1LF5GYI3 381 aa30.19■■■□□ 2.42
CDCA4-202ENST00000392590 DHX57Q6P158 1386 aaKnown RBP30.19■■■□□ 2.42
CDCA4-202ENST00000392590 NWD1Q149M9 1564 aa30.17■■■□□ 2.42
CDCA4-202ENST00000392590 NKTRP30414 1462 aaKnown RBP30.17■■■□□ 2.42
CDCA4-202ENST00000392590 TMEM94Q12767 1356 aa30.17■■■□□ 2.42
CDCA4-202ENST00000392590 RBM33Q96EV2 1170 aaKnown RBP30.17■■■□□ 2.42
CDCA4-202ENST00000392590 DCAF11Q8TEB1 546 aa30.15■■■□□ 2.42
CDCA4-202ENST00000392590 PTPRUQ92729 1446 aa30.15■■■□□ 2.42
CDCA4-202ENST00000392590 CHD2O14647 1828 aaKnown RBP30.13■■■□□ 2.41
CDCA4-202ENST00000392590 TOM1O60784 492 aa30.13■■■□□ 2.41
CDCA4-202ENST00000392590 KDM2AQ9Y2K7 1162 aa30.13■■■□□ 2.41
CDCA4-202ENST00000392590 ALKQ9UM73 1620 aa30.12■■■□□ 2.41
CDCA4-202ENST00000392590 IFT172Q9UG01 1749 aa30.11■■■□□ 2.41
CDCA4-202ENST00000392590 STAC3Q96MF2 364 aa30.11■■■□□ 2.41
CDCA4-202ENST00000392590 SIN3AQ96ST3 1273 aa30.1■■■□□ 2.41
CDCA4-202ENST00000392590 PIK3C2GO75747 1445 aa30.09■■■□□ 2.41
CDCA4-202ENST00000392590 MYOM2P54296 1465 aa30.09■■■□□ 2.41
CDCA4-202ENST00000392590 C14orf93Q9H972 538 aaKnown RBP30.06■■■□□ 2.4
CDCA4-202ENST00000392590 NRXN1Q9ULB1 1477 aa30.06■■■□□ 2.4
CDCA4-202ENST00000392590 NEUROD1Q13562 356 aa30.06■■■□□ 2.4
CDCA4-202ENST00000392590 C14orf37Q86TY3 774 aa30.05■■■□□ 2.4
CDCA4-202ENST00000392590 CFAP70Q5T0N1 1121 aa30.04■■■□□ 2.4
CDCA4-202ENST00000392590 NCOA3Q9Y6Q9 1424 aa30.03■■■□□ 2.4
CDCA4-202ENST00000392590 PIP4K2BP78356 416 aa30.02■■■□□ 2.4
CDCA4-202ENST00000392590 TMEM132EQ6IEE7 984 aa30.02■■■□□ 2.4
CDCA4-202ENST00000392590 MSH6P52701 1360 aa30.01■■■□□ 2.39
CDCA4-202ENST00000392590 SCAF1Q9H7N4 1312 aaKnown RBP30.01■■■□□ 2.39
CDCA4-202ENST00000392590 SETD1AO15047 1707 aaKnown RBP30■■■□□ 2.39
CDCA4-202ENST00000392590 XRN1Q8IZH2 1706 aaKnown RBP30■■■□□ 2.39
CDCA4-202ENST00000392590 STK26Q9P289 416 aa29.99■■■□□ 2.39
CDCA4-202ENST00000392590 XIRP1Q702N8 1843 aaKnown RBP29.99■■■□□ 2.39
CDCA4-202ENST00000392590 C19orf44Q9H6X5 657 aa29.97■■■□□ 2.39
CDCA4-202ENST00000392590 L3MBTL2Q969R5 705 aa29.96■■■□□ 2.39
CDCA4-202ENST00000392590 LRPPRCP42704 1394 aaKnown RBP29.95■■■□□ 2.38
CDCA4-202ENST00000392590 ROBO2Q9HCK4 1378 aa29.95■■■□□ 2.38
CDCA4-202ENST00000392590 PTCH1Q13635 1447 aa29.94■■■□□ 2.38
CDCA4-202ENST00000392590 PRAG1Q86YV5 1406 aa29.92■■■□□ 2.38
CDCA4-202ENST00000392590 ABCC11Q96J66 1382 aa29.92■■■□□ 2.38
CDCA4-202ENST00000392590 ATF3P18847 181 aa29.91■■■□□ 2.38
CDCA4-202ENST00000392590 YTHDC2Q9H6S0 1430 aaKnown RBP29.91■■■□□ 2.38
CDCA4-202ENST00000392590 CADPS2Q86UW7 1296 aa29.91■■■□□ 2.38
CDCA4-202ENST00000392590 ASXL1Q8IXJ9 1541 aa29.9■■■□□ 2.38
CDCA4-202ENST00000392590 SLAIN2Q9P270 581 aa29.88■■■□□ 2.37
CDCA4-202ENST00000392590 LAMC1P11047 1609 aa29.88■■■□□ 2.37
CDCA4-202ENST00000392590 TECPR2O15040 1411 aa29.87■■■□□ 2.37
CDCA4-202ENST00000392590 WAPLQ7Z5K2 1190 aa29.86■■■□□ 2.37
CDCA4-202ENST00000392590 SIRT1Q96EB6 747 aa29.85■■■□□ 2.37
CDCA4-202ENST00000392590 ADGRL3Q9HAR2 1447 aa29.83■■■□□ 2.37
CDCA4-202ENST00000392590 DCCP43146 1447 aa29.81■■■□□ 2.36
CDCA4-202ENST00000392590 FAM135BQ49AJ0 1406 aa29.81■■■□□ 2.36
CDCA4-202ENST00000392590 ADGRB1O14514 1584 aa29.81■■■□□ 2.36
CDCA4-202ENST00000392590 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.8■■■□□ 2.36
CDCA4-202ENST00000392590 TONSLQ96HA7 1378 aa29.8■■■□□ 2.36
CDCA4-202ENST00000392590 HSPA1LP34931 641 aa29.8■■■□□ 2.36
CDCA4-202ENST00000392590 TRAK1Q9UPV9 953 aa29.8■■■□□ 2.36
CDCA4-202ENST00000392590 PLEKHH1Q9ULM0 1364 aa29.78■■■□□ 2.36
CDCA4-202ENST00000392590 PRAM1Q96QH2 718 aa29.77■■■□□ 2.36
CDCA4-202ENST00000392590 NBPF1Q3BBV0 1214 aa29.76■■■□□ 2.36
CDCA4-202ENST00000392590 POGKQ9P215 609 aa29.76■■■□□ 2.36
CDCA4-202ENST00000392590 KNDC1Q76NI1 1749 aa29.74■■■□□ 2.35
CDCA4-202ENST00000392590 CLSPNQ9HAW4 1339 aa29.73■■■□□ 2.35
CDCA4-202ENST00000392590 SAFB2Q14151 953 aaKnown RBP eCLIP29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms