RNA–Protein interactions for RNA: ENST00000392415.6

UBE2E3-201, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBE2E3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-201ENST00000392415 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.89■■■□□ 2.54
UBE2E3-201ENST00000392415 SLC26A8Q96RN1 970 aa30.89■■■□□ 2.54
UBE2E3-201ENST00000392415 PLEKHG1Q9ULL1 1385 aa30.88■■■□□ 2.53
UBE2E3-201ENST00000392415 TRPM2O94759 1503 aa30.86■■■□□ 2.53
UBE2E3-201ENST00000392415 PPP1R15AO75807 674 aaPredicted RBP30.86■■■□□ 2.53
UBE2E3-201ENST00000392415 SLC4A1APQ9BWU0 796 aaKnown RBP30.86■■■□□ 2.53
UBE2E3-201ENST00000392415 BCANQ96GW7 911 aa30.84■■■□□ 2.53
UBE2E3-201ENST00000392415 TOM1O60784 492 aa30.82■■■□□ 2.52
UBE2E3-201ENST00000392415 CLTCL1P53675 1640 aa30.82■■■□□ 2.52
UBE2E3-201ENST00000392415 KCNA6P17658 529 aa30.81■■■□□ 2.52
UBE2E3-201ENST00000392415 NUTM2DQ5VT03 806 aaPredicted RBP30.79■■■□□ 2.52
UBE2E3-201ENST00000392415 SENP3Q9H4L4 574 aaPredicted RBP30.77■■■□□ 2.52
UBE2E3-201ENST00000392415 TBX22Q9Y458 520 aa30.76■■■□□ 2.52
UBE2E3-201ENST00000392415 XIRP1Q702N8 1843 aaKnown RBP30.76■■■□□ 2.52
UBE2E3-201ENST00000392415 KIF1BO60333 1816 aa30.76■■■□□ 2.51
UBE2E3-201ENST00000392415 NWD1Q149M9 1564 aa30.75■■■□□ 2.51
UBE2E3-201ENST00000392415 SETD5Q9C0A6 1442 aa30.75■■■□□ 2.51
UBE2E3-201ENST00000392415 ALKQ9UM73 1620 aa30.74■■■□□ 2.51
UBE2E3-201ENST00000392415 ACIN1Q9UKV3 1341 aaKnown RBP30.74■■■□□ 2.51
UBE2E3-201ENST00000392415 ADAMTS13Q76LX8 1427 aa30.74■■■□□ 2.51
UBE2E3-201ENST00000392415 CHD2O14647 1828 aaKnown RBP30.74■■■□□ 2.51
UBE2E3-201ENST00000392415 ZNF326Q5BKZ1 582 aaKnown RBP30.73■■■□□ 2.51
UBE2E3-201ENST00000392415 NKTRP30414 1462 aaKnown RBP30.72■■■□□ 2.51
UBE2E3-201ENST00000392415 DIP2AQ14689 1571 aa30.71■■■□□ 2.51
UBE2E3-201ENST00000392415 PIP4K2BP78356 416 aa30.71■■■□□ 2.51
UBE2E3-201ENST00000392415 MPHOSPH9Q99550 1183 aa30.71■■■□□ 2.51
UBE2E3-201ENST00000392415 TMEM94Q12767 1356 aa30.69■■■□□ 2.5
UBE2E3-201ENST00000392415 SCAF1Q9H7N4 1312 aaKnown RBP30.69■■■□□ 2.5
UBE2E3-201ENST00000392415 FOXD1Q16676 465 aa30.68■■■□□ 2.5
UBE2E3-201ENST00000392415 PROSER2Q86WR7 435 aaPredicted RBP30.68■■■□□ 2.5
UBE2E3-201ENST00000392415 NEXMIFQ5QGS0 1516 aa30.67■■■□□ 2.5
UBE2E3-201ENST00000392415 PIK3R4Q99570 1358 aa30.66■■■□□ 2.5
UBE2E3-201ENST00000392415 SETBP1Q9Y6X0 1596 aa30.64■■■□□ 2.5
UBE2E3-201ENST00000392415 NRXN3Q9Y4C0 1643 aa30.64■■■□□ 2.5
UBE2E3-201ENST00000392415 RAB3GAP2Q9H2M9 1393 aa30.63■■■□□ 2.49
UBE2E3-201ENST00000392415 RBM33Q96EV2 1170 aaKnown RBP30.6■■■□□ 2.49
UBE2E3-201ENST00000392415 HSPA1LP34931 641 aa30.58■■■□□ 2.49
UBE2E3-201ENST00000392415 RPGRIP1LQ68CZ1 1315 aa30.57■■■□□ 2.49
UBE2E3-201ENST00000392415 CCDC144AA2RUR9 1427 aa30.57■■■□□ 2.48
UBE2E3-201ENST00000392415 VGFO15240 615 aaPredicted RBP30.55■■■□□ 2.48
UBE2E3-201ENST00000392415 PTPRUQ92729 1446 aa30.55■■■□□ 2.48
UBE2E3-201ENST00000392415 AMOTL2Q9Y2J4 779 aa30.53■■■□□ 2.48
UBE2E3-201ENST00000392415 NCOA3Q9Y6Q9 1424 aa30.53■■■□□ 2.48
UBE2E3-201ENST00000392415 PPLO60437 1756 aa30.52■■■□□ 2.48
UBE2E3-201ENST00000392415 MSH6P52701 1360 aa30.52■■■□□ 2.48
UBE2E3-201ENST00000392415 HRCP23327 699 aa30.5■■■□□ 2.47
UBE2E3-201ENST00000392415 METP08581 1390 aa30.5■■■□□ 2.47
UBE2E3-201ENST00000392415 SPATA31E1Q6ZUB1 1445 aa30.5■■■□□ 2.47
UBE2E3-201ENST00000392415 XRN1Q8IZH2 1706 aaKnown RBP30.48■■■□□ 2.47
UBE2E3-201ENST00000392415 FAM135BQ49AJ0 1406 aa30.47■■■□□ 2.47
UBE2E3-201ENST00000392415 RGL3Q3MIN7 710 aa30.44■■■□□ 2.46
UBE2E3-201ENST00000392415 SETD1AO15047 1707 aaKnown RBP30.43■■■□□ 2.46
UBE2E3-201ENST00000392415 C14orf37Q86TY3 774 aa30.41■■■□□ 2.46
UBE2E3-201ENST00000392415 C19orf44Q9H6X5 657 aa30.41■■■□□ 2.46
UBE2E3-201ENST00000392415 IFT172Q9UG01 1749 aa30.41■■■□□ 2.46
UBE2E3-201ENST00000392415 SLAIN2Q9P270 581 aa30.4■■■□□ 2.46
UBE2E3-201ENST00000392415 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.39■■■□□ 2.46
UBE2E3-201ENST00000392415 ANKRD30BQ9BXX2 1392 aa30.39■■■□□ 2.46
UBE2E3-201ENST00000392415 DISP3Q9P2K9 1392 aa30.39■■■□□ 2.46
UBE2E3-201ENST00000392415 ROBO1Q9Y6N7 1651 aa30.38■■■□□ 2.45
UBE2E3-201ENST00000392415 ADGRF5Q8IZF2 1346 aa30.36■■■□□ 2.45
UBE2E3-201ENST00000392415 CADPS2Q86UW7 1296 aa30.35■■■□□ 2.45
UBE2E3-201ENST00000392415 ATF3P18847 181 aa30.32■■■□□ 2.44
UBE2E3-201ENST00000392415 DCCP43146 1447 aa30.31■■■□□ 2.44
UBE2E3-201ENST00000392415 PTCH1Q13635 1447 aa30.3■■■□□ 2.44
UBE2E3-201ENST00000392415 PRAG1Q86YV5 1406 aa30.3■■■□□ 2.44
UBE2E3-201ENST00000392415 PIK3C2GO75747 1445 aa30.27■■■□□ 2.44
UBE2E3-201ENST00000392415 ROBO2Q9HCK4 1378 aa30.26■■■□□ 2.43
UBE2E3-201ENST00000392415 ADGRL3Q9HAR2 1447 aa30.25■■■□□ 2.43
UBE2E3-201ENST00000392415 MED1Q15648 1581 aaPredicted RBP30.25■■■□□ 2.43
UBE2E3-201ENST00000392415 NALCNQ8IZF0 1738 aa30.23■■■□□ 2.43
UBE2E3-201ENST00000392415 MYOM2P54296 1465 aa30.22■■■□□ 2.43
UBE2E3-201ENST00000392415 NRXN1Q9ULB1 1477 aa30.22■■■□□ 2.43
UBE2E3-201ENST00000392415 PHLPP1O60346 1717 aa30.19■■■□□ 2.42
UBE2E3-201ENST00000392415 ASXL1Q8IXJ9 1541 aa30.18■■■□□ 2.42
UBE2E3-201ENST00000392415 MST1RQ04912 1400 aa30.18■■■□□ 2.42
UBE2E3-201ENST00000392415 C14orf93Q9H972 538 aaKnown RBP30.18■■■□□ 2.42
UBE2E3-201ENST00000392415 TECPR2O15040 1411 aa30.16■■■□□ 2.42
UBE2E3-201ENST00000392415 LRPPRCP42704 1394 aaKnown RBP30.16■■■□□ 2.42
UBE2E3-201ENST00000392415 TMEM132EQ6IEE7 984 aa30.16■■■□□ 2.42
UBE2E3-201ENST00000392415 ILDR2Q71H61 639 aa30.15■■■□□ 2.42
UBE2E3-201ENST00000392415 BRINP3Q76B58 766 aa30.15■■■□□ 2.42
UBE2E3-201ENST00000392415 ABCC11Q96J66 1382 aa30.14■■■□□ 2.42
UBE2E3-201ENST00000392415 AHDC1Q5TGY3 1603 aaPredicted RBP30.13■■■□□ 2.41
UBE2E3-201ENST00000392415 LAMC1P11047 1609 aa30.12■■■□□ 2.41
UBE2E3-201ENST00000392415 COL16A1Q07092 1604 aaPredicted RBP30.12■■■□□ 2.41
UBE2E3-201ENST00000392415 KNDC1Q76NI1 1749 aa30.12■■■□□ 2.41
UBE2E3-201ENST00000392415 STK26Q9P289 416 aa30.12■■■□□ 2.41
UBE2E3-201ENST00000392415 CFAP70Q5T0N1 1121 aa30.11■■■□□ 2.41
UBE2E3-201ENST00000392415 YTHDC2Q9H6S0 1430 aaKnown RBP30.11■■■□□ 2.41
UBE2E3-201ENST00000392415 STAC3Q96MF2 364 aa30.09■■■□□ 2.41
UBE2E3-201ENST00000392415 DCAF11Q8TEB1 546 aa30.07■■■□□ 2.4
UBE2E3-201ENST00000392415 JCADQ9P266 1359 aa30.07■■■□□ 2.4
UBE2E3-201ENST00000392415 WAPLQ7Z5K2 1190 aa30.06■■■□□ 2.4
UBE2E3-201ENST00000392415 C1orf167Q5SNV9 1468 aa30.05■■■□□ 2.4
UBE2E3-201ENST00000392415 DHX57Q6P158 1386 aaKnown RBP30.05■■■□□ 2.4
UBE2E3-201ENST00000392415 SIRT1Q96EB6 747 aa30.04■■■□□ 2.4
UBE2E3-201ENST00000392415 KDM2AQ9Y2K7 1162 aa30.04■■■□□ 2.4
UBE2E3-201ENST00000392415 NHSL1Q5SYE7 1610 aa30.03■■■□□ 2.4
UBE2E3-201ENST00000392415 PHF23Q9BUL5 403 aaPredicted RBP30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms