RNA–Protein interactions for RNA: ENST00000392090.6

PDCD2-202, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-202ENST00000392090 SLC26A8Q96RN1 970 aa29.32■■■□□ 2.28
PDCD2-202ENST00000392090 STRCP1A6NGW2 1772 aa29.31■■■□□ 2.28
PDCD2-202ENST00000392090 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.31■■■□□ 2.28
PDCD2-202ENST00000392090 SLC4A1APQ9BWU0 796 aaKnown RBP29.31■■■□□ 2.28
PDCD2-202ENST00000392090 SENP3Q9H4L4 574 aaPredicted RBP29.31■■■□□ 2.28
PDCD2-202ENST00000392090 TOM1O60784 492 aa29.27■■■□□ 2.28
PDCD2-202ENST00000392090 PLEKHG1Q9ULL1 1385 aa29.26■■■□□ 2.28
PDCD2-202ENST00000392090 LRRC7Q96NW7 1537 aa29.26■■■□□ 2.27
PDCD2-202ENST00000392090 NUTM2DQ5VT03 806 aaPredicted RBP29.26■■■□□ 2.27
PDCD2-202ENST00000392090 SCAF1Q9H7N4 1312 aaKnown RBP29.23■■■□□ 2.27
PDCD2-202ENST00000392090 ZNF326Q5BKZ1 582 aaKnown RBP29.23■■■□□ 2.27
PDCD2-202ENST00000392090 TRPM2O94759 1503 aa29.23■■■□□ 2.27
PDCD2-202ENST00000392090 KCNA6P17658 529 aa29.22■■■□□ 2.27
PDCD2-202ENST00000392090 PIP4K2BP78356 416 aa29.2■■■□□ 2.26
PDCD2-202ENST00000392090 CLTCL1P53675 1640 aa29.2■■■□□ 2.26
PDCD2-202ENST00000392090 SETD5Q9C0A6 1442 aa29.16■■■□□ 2.26
PDCD2-202ENST00000392090 TBX22Q9Y458 520 aa29.15■■■□□ 2.26
PDCD2-202ENST00000392090 ACIN1Q9UKV3 1341 aaKnown RBP29.15■■■□□ 2.26
PDCD2-202ENST00000392090 KIF1BO60333 1816 aa29.15■■■□□ 2.26
PDCD2-202ENST00000392090 FOXD1Q16676 465 aa29.14■■■□□ 2.26
PDCD2-202ENST00000392090 PROSER2Q86WR7 435 aaPredicted RBP29.14■■■□□ 2.26
PDCD2-202ENST00000392090 MPHOSPH9Q99550 1183 aa29.14■■■□□ 2.26
PDCD2-202ENST00000392090 TMEM94Q12767 1356 aa29.11■■■□□ 2.25
PDCD2-202ENST00000392090 ADAMTS13Q76LX8 1427 aa29.1■■■□□ 2.25
PDCD2-202ENST00000392090 NWD1Q149M9 1564 aa29.09■■■□□ 2.25
PDCD2-202ENST00000392090 NKTRP30414 1462 aaKnown RBP29.09■■■□□ 2.25
PDCD2-202ENST00000392090 DIP2AQ14689 1571 aa29.09■■■□□ 2.25
PDCD2-202ENST00000392090 XIRP1Q702N8 1843 aaKnown RBP29.08■■■□□ 2.25
PDCD2-202ENST00000392090 CHD2O14647 1828 aaKnown RBP29.07■■■□□ 2.24
PDCD2-202ENST00000392090 RBM33Q96EV2 1170 aaKnown RBP29.07■■■□□ 2.24
PDCD2-202ENST00000392090 RAB3GAP2Q9H2M9 1393 aa29.05■■■□□ 2.24
PDCD2-202ENST00000392090 ALKQ9UM73 1620 aa29.05■■■□□ 2.24
PDCD2-202ENST00000392090 NEXMIFQ5QGS0 1516 aa29.04■■■□□ 2.24
PDCD2-202ENST00000392090 PIK3R4Q99570 1358 aa29.03■■■□□ 2.24
PDCD2-202ENST00000392090 CCDC144AA2RUR9 1427 aa29.03■■■□□ 2.24
PDCD2-202ENST00000392090 HSPA1LP34931 641 aa29.01■■■□□ 2.23
PDCD2-202ENST00000392090 SETBP1Q9Y6X0 1596 aa29.01■■■□□ 2.23
PDCD2-202ENST00000392090 VGFO15240 615 aaPredicted RBP28.99■■■□□ 2.23
PDCD2-202ENST00000392090 RPGRIP1LQ68CZ1 1315 aa28.98■■■□□ 2.23
PDCD2-202ENST00000392090 NRXN3Q9Y4C0 1643 aa28.98■■■□□ 2.23
PDCD2-202ENST00000392090 AMOTL2Q9Y2J4 779 aa28.97■■■□□ 2.23
PDCD2-202ENST00000392090 MSH6P52701 1360 aa28.97■■■□□ 2.23
PDCD2-202ENST00000392090 C14orf37Q86TY3 774 aa28.96■■■□□ 2.23
PDCD2-202ENST00000392090 RGL3Q3MIN7 710 aa28.93■■■□□ 2.22
PDCD2-202ENST00000392090 PTPRUQ92729 1446 aa28.92■■■□□ 2.22
PDCD2-202ENST00000392090 METP08581 1390 aa28.91■■■□□ 2.22
PDCD2-202ENST00000392090 NCOA3Q9Y6Q9 1424 aa28.9■■■□□ 2.22
PDCD2-202ENST00000392090 PPLO60437 1756 aa28.89■■■□□ 2.22
PDCD2-202ENST00000392090 DISP3Q9P2K9 1392 aa28.88■■■□□ 2.21
PDCD2-202ENST00000392090 HRCP23327 699 aa28.87■■■□□ 2.21
PDCD2-202ENST00000392090 SPATA31E1Q6ZUB1 1445 aa28.86■■■□□ 2.21
PDCD2-202ENST00000392090 FAM135BQ49AJ0 1406 aa28.86■■■□□ 2.21
PDCD2-202ENST00000392090 XRN1Q8IZH2 1706 aaKnown RBP28.84■■■□□ 2.21
PDCD2-202ENST00000392090 C19orf44Q9H6X5 657 aa28.84■■■□□ 2.21
PDCD2-202ENST00000392090 SLAIN2Q9P270 581 aa28.84■■■□□ 2.21
PDCD2-202ENST00000392090 ATF3P18847 181 aa28.82■■■□□ 2.2
PDCD2-202ENST00000392090 ANKRD30BQ9BXX2 1392 aa28.82■■■□□ 2.2
PDCD2-202ENST00000392090 CADPS2Q86UW7 1296 aa28.8■■■□□ 2.2
PDCD2-202ENST00000392090 ADGRF5Q8IZF2 1346 aa28.79■■■□□ 2.2
PDCD2-202ENST00000392090 ROBO1Q9Y6N7 1651 aa28.79■■■□□ 2.2
PDCD2-202ENST00000392090 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.78■■■□□ 2.2
PDCD2-202ENST00000392090 SETD1AO15047 1707 aaKnown RBP28.76■■■□□ 2.19
PDCD2-202ENST00000392090 IFT172Q9UG01 1749 aa28.75■■■□□ 2.19
PDCD2-202ENST00000392090 DCCP43146 1447 aa28.69■■■□□ 2.18
PDCD2-202ENST00000392090 PTCH1Q13635 1447 aa28.69■■■□□ 2.18
PDCD2-202ENST00000392090 ADGRL3Q9HAR2 1447 aa28.68■■■□□ 2.18
PDCD2-202ENST00000392090 ROBO2Q9HCK4 1378 aa28.67■■■□□ 2.18
PDCD2-202ENST00000392090 PIK3C2GO75747 1445 aa28.67■■■□□ 2.18
PDCD2-202ENST00000392090 MED1Q15648 1581 aaPredicted RBP28.67■■■□□ 2.18
PDCD2-202ENST00000392090 STK26Q9P289 416 aa28.65■■■□□ 2.18
PDCD2-202ENST00000392090 PRAG1Q86YV5 1406 aa28.63■■■□□ 2.17
PDCD2-202ENST00000392090 PHLPP1O60346 1717 aa28.63■■■□□ 2.17
PDCD2-202ENST00000392090 NALCNQ8IZF0 1738 aa28.63■■■□□ 2.17
PDCD2-202ENST00000392090 MYOM2P54296 1465 aa28.62■■■□□ 2.17
PDCD2-202ENST00000392090 TMEM132EQ6IEE7 984 aa28.62■■■□□ 2.17
PDCD2-202ENST00000392090 BRINP3Q76B58 766 aa28.59■■■□□ 2.17
PDCD2-202ENST00000392090 PHF23Q9BUL5 403 aaPredicted RBP28.59■■■□□ 2.17
PDCD2-202ENST00000392090 C14orf93Q9H972 538 aaKnown RBP28.59■■■□□ 2.17
PDCD2-202ENST00000392090 LRPPRCP42704 1394 aaKnown RBP28.59■■■□□ 2.17
PDCD2-202ENST00000392090 MST1RQ04912 1400 aa28.59■■■□□ 2.17
PDCD2-202ENST00000392090 NRXN1Q9ULB1 1477 aa28.58■■■□□ 2.17
PDCD2-202ENST00000392090 CFAP70Q5T0N1 1121 aa28.57■■■□□ 2.16
PDCD2-202ENST00000392090 DCAF11Q8TEB1 546 aa28.57■■■□□ 2.16
PDCD2-202ENST00000392090 KDM2AQ9Y2K7 1162 aa28.57■■■□□ 2.16
PDCD2-202ENST00000392090 ILDR2Q71H61 639 aa28.56■■■□□ 2.16
PDCD2-202ENST00000392090 ASXL1Q8IXJ9 1541 aa28.55■■■□□ 2.16
PDCD2-202ENST00000392090 ABCC11Q96J66 1382 aa28.55■■■□□ 2.16
PDCD2-202ENST00000392090 YTHDC2Q9H6S0 1430 aaKnown RBP28.54■■■□□ 2.16
PDCD2-202ENST00000392090 LAMC1P11047 1609 aa28.54■■■□□ 2.16
PDCD2-202ENST00000392090 TECPR2O15040 1411 aa28.53■■■□□ 2.16
PDCD2-202ENST00000392090 DHX57Q6P158 1386 aaKnown RBP28.52■■■□□ 2.16
PDCD2-202ENST00000392090 JCADQ9P266 1359 aa28.52■■■□□ 2.16
PDCD2-202ENST00000392090 AHDC1Q5TGY3 1603 aaPredicted RBP28.52■■■□□ 2.16
PDCD2-202ENST00000392090 WAPLQ7Z5K2 1190 aa28.52■■■□□ 2.16
PDCD2-202ENST00000392090 COL16A1Q07092 1604 aaPredicted RBP28.51■■■□□ 2.15
PDCD2-202ENST00000392090 STAC3Q96MF2 364 aa28.51■■■□□ 2.15
PDCD2-202ENST00000392090 KNDC1Q76NI1 1749 aa28.5■■■□□ 2.15
PDCD2-202ENST00000392090 C1orf167Q5SNV9 1468 aa28.48■■■□□ 2.15
PDCD2-202ENST00000392090 PLEKHH1Q9ULM0 1364 aa28.46■■■□□ 2.15
PDCD2-202ENST00000392090 SIRT1Q96EB6 747 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms