RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 PLEKHG1Q9ULL1 1385 aa17.1■□□□□ 0.33
IGHV4-28-201ENST00000390612 LRRC7Q96NW7 1537 aa17.1■□□□□ 0.33
IGHV4-28-201ENST00000390612 HDGFP51858 240 aaKnown RBP17.09■□□□□ 0.33
IGHV4-28-201ENST00000390612 CHD2O14647 1828 aaKnown RBP17.08■□□□□ 0.33
IGHV4-28-201ENST00000390612 SETD5Q9C0A6 1442 aa17.08■□□□□ 0.32
IGHV4-28-201ENST00000390612 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.08■□□□□ 0.32
IGHV4-28-201ENST00000390612 SLC4A1APQ9BWU0 796 aaKnown RBP17.08■□□□□ 0.32
IGHV4-28-201ENST00000390612 CHGAP10645 457 aaKnown RBP17.07■□□□□ 0.32
IGHV4-28-201ENST00000390612 ACIN1Q9UKV3 1341 aaKnown RBP17.06■□□□□ 0.32
IGHV4-28-201ENST00000390612 SLC26A8Q96RN1 970 aa17.06■□□□□ 0.32
IGHV4-28-201ENST00000390612 KCNA6P17658 529 aa17.05■□□□□ 0.32
IGHV4-28-201ENST00000390612 ALKQ9UM73 1620 aa17.05■□□□□ 0.32
IGHV4-28-201ENST00000390612 NWD1Q149M9 1564 aa17.05■□□□□ 0.32
IGHV4-28-201ENST00000390612 ADAMTS13Q76LX8 1427 aa17.04■□□□□ 0.32
IGHV4-28-201ENST00000390612 TBX22Q9Y458 520 aa17.04■□□□□ 0.32
IGHV4-28-201ENST00000390612 UBAP1LF5GYI3 381 aa17.03■□□□□ 0.32
IGHV4-28-201ENST00000390612 MPHOSPH9Q99550 1183 aa17.03■□□□□ 0.32
IGHV4-28-201ENST00000390612 NEXMIFQ5QGS0 1516 aa17.02■□□□□ 0.32
IGHV4-28-201ENST00000390612 NRXN3Q9Y4C0 1643 aa17.02■□□□□ 0.31
IGHV4-28-201ENST00000390612 DIP2AQ14689 1571 aa17.02■□□□□ 0.31
IGHV4-28-201ENST00000390612 RAB3GAP2Q9H2M9 1393 aa17.02■□□□□ 0.31
IGHV4-28-201ENST00000390612 PPP1R15AO75807 674 aaPredicted RBP17.01■□□□□ 0.31
IGHV4-28-201ENST00000390612 FOXD1Q16676 465 aa17■□□□□ 0.31
IGHV4-28-201ENST00000390612 NUTM2DQ5VT03 806 aaPredicted RBP17■□□□□ 0.31
IGHV4-28-201ENST00000390612 SETBP1Q9Y6X0 1596 aa17■□□□□ 0.31
IGHV4-28-201ENST00000390612 NKTRP30414 1462 aaKnown RBP16.99■□□□□ 0.31
IGHV4-28-201ENST00000390612 HRCP23327 699 aa16.99■□□□□ 0.31
IGHV4-28-201ENST00000390612 TOM1O60784 492 aa16.98■□□□□ 0.31
IGHV4-28-201ENST00000390612 PIK3R4Q99570 1358 aa16.98■□□□□ 0.31
IGHV4-28-201ENST00000390612 PPLO60437 1756 aa16.97■□□□□ 0.31
IGHV4-28-201ENST00000390612 BCANQ96GW7 911 aa16.97■□□□□ 0.31
IGHV4-28-201ENST00000390612 ZNF326Q5BKZ1 582 aaKnown RBP16.96■□□□□ 0.31
IGHV4-28-201ENST00000390612 RPGRIP1LQ68CZ1 1315 aa16.96■□□□□ 0.3
IGHV4-28-201ENST00000390612 TMEM94Q12767 1356 aa16.95■□□□□ 0.3
IGHV4-28-201ENST00000390612 SENP3Q9H4L4 574 aaPredicted RBP16.95■□□□□ 0.3
IGHV4-28-201ENST00000390612 SPATA31E1Q6ZUB1 1445 aa16.95■□□□□ 0.3
IGHV4-28-201ENST00000390612 PTPRUQ92729 1446 aa16.94■□□□□ 0.3
IGHV4-28-201ENST00000390612 SETD1AO15047 1707 aaKnown RBP16.93■□□□□ 0.3
IGHV4-28-201ENST00000390612 PROSER2Q86WR7 435 aaPredicted RBP16.93■□□□□ 0.3
IGHV4-28-201ENST00000390612 CCDC144AA2RUR9 1427 aa16.93■□□□□ 0.3
IGHV4-28-201ENST00000390612 IFT172Q9UG01 1749 aa16.93■□□□□ 0.3
IGHV4-28-201ENST00000390612 XRN1Q8IZH2 1706 aaKnown RBP16.92■□□□□ 0.3
IGHV4-28-201ENST00000390612 NCOA3Q9Y6Q9 1424 aa16.91■□□□□ 0.3
IGHV4-28-201ENST00000390612 VGFO15240 615 aaPredicted RBP16.91■□□□□ 0.3
IGHV4-28-201ENST00000390612 METP08581 1390 aa16.89■□□□□ 0.3
IGHV4-28-201ENST00000390612 PIP4K2BP78356 416 aa16.89■□□□□ 0.29
IGHV4-28-201ENST00000390612 RBM33Q96EV2 1170 aaKnown RBP16.89■□□□□ 0.29
IGHV4-28-201ENST00000390612 AMOTL2Q9Y2J4 779 aa16.88■□□□□ 0.29
IGHV4-28-201ENST00000390612 ANKRD30BQ9BXX2 1392 aa16.88■□□□□ 0.29
IGHV4-28-201ENST00000390612 HSPA1LP34931 641 aa16.86■□□□□ 0.29
IGHV4-28-201ENST00000390612 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.85■□□□□ 0.29
IGHV4-28-201ENST00000390612 FAM135BQ49AJ0 1406 aa16.85■□□□□ 0.29
IGHV4-28-201ENST00000390612 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
IGHV4-28-201ENST00000390612 MSH6P52701 1360 aa16.84■□□□□ 0.29
IGHV4-28-201ENST00000390612 PRAG1Q86YV5 1406 aa16.84■□□□□ 0.29
IGHV4-28-201ENST00000390612 RGL3Q3MIN7 710 aa16.83■□□□□ 0.28
IGHV4-28-201ENST00000390612 ADGRF5Q8IZF2 1346 aa16.83■□□□□ 0.28
IGHV4-28-201ENST00000390612 C19orf44Q9H6X5 657 aa16.81■□□□□ 0.28
IGHV4-28-201ENST00000390612 ROBO1Q9Y6N7 1651 aa16.81■□□□□ 0.28
IGHV4-28-201ENST00000390612 NRXN1Q9ULB1 1477 aa16.8■□□□□ 0.28
IGHV4-28-201ENST00000390612 SLAIN2Q9P270 581 aa16.79■□□□□ 0.28
IGHV4-28-201ENST00000390612 PIK3C2GO75747 1445 aa16.79■□□□□ 0.28
IGHV4-28-201ENST00000390612 DCCP43146 1447 aa16.78■□□□□ 0.28
IGHV4-28-201ENST00000390612 PTCH1Q13635 1447 aa16.78■□□□□ 0.28
IGHV4-28-201ENST00000390612 NALCNQ8IZF0 1738 aa16.77■□□□□ 0.28
IGHV4-28-201ENST00000390612 MYOM2P54296 1465 aa16.77■□□□□ 0.28
IGHV4-28-201ENST00000390612 ASXL1Q8IXJ9 1541 aa16.76■□□□□ 0.27
IGHV4-28-201ENST00000390612 CADPS2Q86UW7 1296 aa16.76■□□□□ 0.27
IGHV4-28-201ENST00000390612 ROBO2Q9HCK4 1378 aa16.76■□□□□ 0.27
IGHV4-28-201ENST00000390612 ADGRL3Q9HAR2 1447 aa16.75■□□□□ 0.27
IGHV4-28-201ENST00000390612 TECPR2O15040 1411 aa16.74■□□□□ 0.27
IGHV4-28-201ENST00000390612 KNDC1Q76NI1 1749 aa16.73■□□□□ 0.27
IGHV4-28-201ENST00000390612 ATF3P18847 181 aa16.73■□□□□ 0.27
IGHV4-28-201ENST00000390612 C14orf37Q86TY3 774 aa16.73■□□□□ 0.27
IGHV4-28-201ENST00000390612 C14orf93Q9H972 538 aaKnown RBP16.73■□□□□ 0.27
IGHV4-28-201ENST00000390612 LAMC1P11047 1609 aa16.72■□□□□ 0.27
IGHV4-28-201ENST00000390612 LRPPRCP42704 1394 aaKnown RBP16.72■□□□□ 0.27
IGHV4-28-201ENST00000390612 ABCC11Q96J66 1382 aa16.72■□□□□ 0.27
IGHV4-28-201ENST00000390612 DHX57Q6P158 1386 aaKnown RBP16.71■□□□□ 0.27
IGHV4-28-201ENST00000390612 MST1RQ04912 1400 aa16.7■□□□□ 0.26
IGHV4-28-201ENST00000390612 PHLPP1O60346 1717 aa16.7■□□□□ 0.26
IGHV4-28-201ENST00000390612 STAC3Q96MF2 364 aa16.7■□□□□ 0.26
IGHV4-28-201ENST00000390612 MED1Q15648 1581 aaPredicted RBP16.69■□□□□ 0.26
IGHV4-28-201ENST00000390612 DISP3Q9P2K9 1392 aa16.69■□□□□ 0.26
IGHV4-28-201ENST00000390612 TMEM132EQ6IEE7 984 aa16.69■□□□□ 0.26
IGHV4-28-201ENST00000390612 AHDC1Q5TGY3 1603 aaPredicted RBP16.69■□□□□ 0.26
IGHV4-28-201ENST00000390612 COL16A1Q07092 1604 aaPredicted RBP16.68■□□□□ 0.26
IGHV4-28-201ENST00000390612 CFAP70Q5T0N1 1121 aa16.68■□□□□ 0.26
IGHV4-28-201ENST00000390612 SIRT1Q96EB6 747 aa16.68■□□□□ 0.26
IGHV4-28-201ENST00000390612 YTHDC2Q9H6S0 1430 aaKnown RBP16.68■□□□□ 0.26
IGHV4-28-201ENST00000390612 BRINP3Q76B58 766 aa16.67■□□□□ 0.26
IGHV4-28-201ENST00000390612 ADGRB1O14514 1584 aa16.66■□□□□ 0.26
IGHV4-28-201ENST00000390612 NHSL1Q5SYE7 1610 aa16.66■□□□□ 0.26
IGHV4-28-201ENST00000390612 DCAF11Q8TEB1 546 aa16.65■□□□□ 0.26
IGHV4-28-201ENST00000390612 STK26Q9P289 416 aa16.65■□□□□ 0.26
IGHV4-28-201ENST00000390612 WAPLQ7Z5K2 1190 aa16.64■□□□□ 0.25
IGHV4-28-201ENST00000390612 CDC42BPGQ6DT37 1551 aa16.64■□□□□ 0.25
IGHV4-28-201ENST00000390612 C1orf167Q5SNV9 1468 aa16.63■□□□□ 0.25
IGHV4-28-201ENST00000390612 PLEKHH1Q9ULM0 1364 aa16.63■□□□□ 0.25
IGHV4-28-201ENST00000390612 DLC1Q96QB1 1528 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms