RNA–Protein interactions for RNA: ENST00000390270.2

IGKV3D-20-201, Transcript of immunoglobulin kappa variable 3D-20, humanhuman

APPRIS P1 BASIC

Gene IGKV3D-20, Length 445 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20-201ENST00000390270 RIMS2Q9UQ26 1411 aa17.64■□□□□ 0.41
IGKV3D-20-201ENST00000390270 LRRC7Q96NW7 1537 aa17.62■□□□□ 0.41
IGKV3D-20-201ENST00000390270 CHD2O14647 1828 aaKnown RBP17.62■□□□□ 0.41
IGKV3D-20-201ENST00000390270 EID1Q9Y6B2 187 aa17.6■□□□□ 0.41
IGKV3D-20-201ENST00000390270 NEXMIFQ5QGS0 1516 aa17.6■□□□□ 0.41
IGKV3D-20-201ENST00000390270 DIP2AQ14689 1571 aa17.59■□□□□ 0.41
IGKV3D-20-201ENST00000390270 PLEKHG1Q9ULL1 1385 aa17.58■□□□□ 0.4
IGKV3D-20-201ENST00000390270 PPLO60437 1756 aa17.58■□□□□ 0.4
IGKV3D-20-201ENST00000390270 SETD1AO15047 1707 aaKnown RBP17.56■□□□□ 0.4
IGKV3D-20-201ENST00000390270 IFT172Q9UG01 1749 aa17.56■□□□□ 0.4
IGKV3D-20-201ENST00000390270 SETBP1Q9Y6X0 1596 aa17.56■□□□□ 0.4
IGKV3D-20-201ENST00000390270 CHGAP10645 457 aaKnown RBP17.55■□□□□ 0.4
IGKV3D-20-201ENST00000390270 NKTRP30414 1462 aaKnown RBP17.55■□□□□ 0.4
IGKV3D-20-201ENST00000390270 ADAMTS13Q76LX8 1427 aa17.55■□□□□ 0.4
IGKV3D-20-201ENST00000390270 TRIM52Q96A61 297 aa17.54■□□□□ 0.4
IGKV3D-20-201ENST00000390270 XRN1Q8IZH2 1706 aaKnown RBP17.53■□□□□ 0.4
IGKV3D-20-201ENST00000390270 SLC26A8Q96RN1 970 aa17.53■□□□□ 0.4
IGKV3D-20-201ENST00000390270 SENP3Q9H4L4 574 aaPredicted RBP17.53■□□□□ 0.4
IGKV3D-20-201ENST00000390270 SETD5Q9C0A6 1442 aa17.52■□□□□ 0.4
IGKV3D-20-201ENST00000390270 UBAP1LF5GYI3 381 aa17.51■□□□□ 0.39
IGKV3D-20-201ENST00000390270 NUTM2DQ5VT03 806 aaPredicted RBP17.5■□□□□ 0.39
IGKV3D-20-201ENST00000390270 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
IGKV3D-20-201ENST00000390270 RAB3GAP2Q9H2M9 1393 aa17.5■□□□□ 0.39
IGKV3D-20-201ENST00000390270 PPP1R15AO75807 674 aaPredicted RBP17.49■□□□□ 0.39
IGKV3D-20-201ENST00000390270 FOXD1Q16676 465 aa17.48■□□□□ 0.39
IGKV3D-20-201ENST00000390270 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.46■□□□□ 0.39
IGKV3D-20-201ENST00000390270 TMEM94Q12767 1356 aa17.45■□□□□ 0.38
IGKV3D-20-201ENST00000390270 PTPRUQ92729 1446 aa17.45■□□□□ 0.38
IGKV3D-20-201ENST00000390270 KCNA6P17658 529 aa17.44■□□□□ 0.38
IGKV3D-20-201ENST00000390270 BCANQ96GW7 911 aa17.43■□□□□ 0.38
IGKV3D-20-201ENST00000390270 MPHOSPH9Q99550 1183 aa17.43■□□□□ 0.38
IGKV3D-20-201ENST00000390270 SPATA31E1Q6ZUB1 1445 aa17.43■□□□□ 0.38
IGKV3D-20-201ENST00000390270 ROBO1Q9Y6N7 1651 aa17.42■□□□□ 0.38
IGKV3D-20-201ENST00000390270 NALCNQ8IZF0 1738 aa17.42■□□□□ 0.38
IGKV3D-20-201ENST00000390270 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.42■□□□□ 0.38
IGKV3D-20-201ENST00000390270 CCDC144AA2RUR9 1427 aa17.42■□□□□ 0.38
IGKV3D-20-201ENST00000390270 ZNF326Q5BKZ1 582 aaKnown RBP17.42■□□□□ 0.38
IGKV3D-20-201ENST00000390270 PIK3R4Q99570 1358 aa17.41■□□□□ 0.38
IGKV3D-20-201ENST00000390270 HDGFP51858 240 aaKnown RBP17.41■□□□□ 0.38
IGKV3D-20-201ENST00000390270 RBM33Q96EV2 1170 aaKnown RBP17.4■□□□□ 0.38
IGKV3D-20-201ENST00000390270 TBX22Q9Y458 520 aa17.4■□□□□ 0.38
IGKV3D-20-201ENST00000390270 TOM1O60784 492 aa17.39■□□□□ 0.37
IGKV3D-20-201ENST00000390270 PIP4K2BP78356 416 aa17.39■□□□□ 0.37
IGKV3D-20-201ENST00000390270 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
IGKV3D-20-201ENST00000390270 METP08581 1390 aa17.38■□□□□ 0.37
IGKV3D-20-201ENST00000390270 ASXL1Q8IXJ9 1541 aa17.37■□□□□ 0.37
IGKV3D-20-201ENST00000390270 PROSER2Q86WR7 435 aaPredicted RBP17.36■□□□□ 0.37
IGKV3D-20-201ENST00000390270 KNDC1Q76NI1 1749 aa17.35■□□□□ 0.37
IGKV3D-20-201ENST00000390270 HSPA1LP34931 641 aa17.34■□□□□ 0.37
IGKV3D-20-201ENST00000390270 MED1Q15648 1581 aaPredicted RBP17.34■□□□□ 0.37
IGKV3D-20-201ENST00000390270 LAMC1P11047 1609 aa17.32■□□□□ 0.36
IGKV3D-20-201ENST00000390270 PRAG1Q86YV5 1406 aa17.32■□□□□ 0.36
IGKV3D-20-201ENST00000390270 MSH6P52701 1360 aa17.32■□□□□ 0.36
IGKV3D-20-201ENST00000390270 ACIN1Q9UKV3 1341 aaKnown RBP17.32■□□□□ 0.36
IGKV3D-20-201ENST00000390270 NCOA3Q9Y6Q9 1424 aa17.31■□□□□ 0.36
IGKV3D-20-201ENST00000390270 RPGRIP1LQ68CZ1 1315 aa17.31■□□□□ 0.36
IGKV3D-20-201ENST00000390270 PHLPP1O60346 1717 aa17.31■□□□□ 0.36
IGKV3D-20-201ENST00000390270 MYOM2P54296 1465 aa17.31■□□□□ 0.36
IGKV3D-20-201ENST00000390270 PIK3C2GO75747 1445 aa17.3■□□□□ 0.36
IGKV3D-20-201ENST00000390270 PTCH1Q13635 1447 aa17.3■□□□□ 0.36
IGKV3D-20-201ENST00000390270 AMOTL2Q9Y2J4 779 aa17.3■□□□□ 0.36
IGKV3D-20-201ENST00000390270 NRXN1Q9ULB1 1477 aa17.3■□□□□ 0.36
IGKV3D-20-201ENST00000390270 ANKRD30BQ9BXX2 1392 aa17.29■□□□□ 0.36
IGKV3D-20-201ENST00000390270 FAM135BQ49AJ0 1406 aa17.29■□□□□ 0.36
IGKV3D-20-201ENST00000390270 COL16A1Q07092 1604 aaPredicted RBP17.29■□□□□ 0.36
IGKV3D-20-201ENST00000390270 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
IGKV3D-20-201ENST00000390270 VGFO15240 615 aaPredicted RBP17.27■□□□□ 0.36
IGKV3D-20-201ENST00000390270 DCCP43146 1447 aa17.27■□□□□ 0.35
IGKV3D-20-201ENST00000390270 ADGRL3Q9HAR2 1447 aa17.27■□□□□ 0.35
IGKV3D-20-201ENST00000390270 RGL3Q3MIN7 710 aa17.26■□□□□ 0.35
IGKV3D-20-201ENST00000390270 NHSL1Q5SYE7 1610 aa17.25■□□□□ 0.35
IGKV3D-20-201ENST00000390270 AHDC1Q5TGY3 1603 aaPredicted RBP17.25■□□□□ 0.35
IGKV3D-20-201ENST00000390270 ROBO2Q9HCK4 1378 aa17.25■□□□□ 0.35
IGKV3D-20-201ENST00000390270 HRCP23327 699 aa17.24■□□□□ 0.35
IGKV3D-20-201ENST00000390270 CDC42BPGQ6DT37 1551 aa17.23■□□□□ 0.35
IGKV3D-20-201ENST00000390270 TECPR2O15040 1411 aa17.22■□□□□ 0.35
IGKV3D-20-201ENST00000390270 MST1RQ04912 1400 aa17.22■□□□□ 0.35
IGKV3D-20-201ENST00000390270 DISP3Q9P2K9 1392 aa17.22■□□□□ 0.35
IGKV3D-20-201ENST00000390270 C14orf37Q86TY3 774 aa17.21■□□□□ 0.35
IGKV3D-20-201ENST00000390270 SHPRHQ149N8 1683 aa17.2■□□□□ 0.34
IGKV3D-20-201ENST00000390270 ADGRB1O14514 1584 aa17.19■□□□□ 0.34
IGKV3D-20-201ENST00000390270 SLAIN2Q9P270 581 aa17.19■□□□□ 0.34
IGKV3D-20-201ENST00000390270 FMN2Q9NZ56 1722 aa17.18■□□□□ 0.34
IGKV3D-20-201ENST00000390270 C19orf44Q9H6X5 657 aa17.18■□□□□ 0.34
IGKV3D-20-201ENST00000390270 LRPPRCP42704 1394 aaKnown RBP17.16■□□□□ 0.34
IGKV3D-20-201ENST00000390270 ARHGEF28Q8N1W1 1705 aaKnown RBP17.16■□□□□ 0.34
IGKV3D-20-201ENST00000390270 YTHDC2Q9H6S0 1430 aaKnown RBP17.16■□□□□ 0.34
IGKV3D-20-201ENST00000390270 CADPS2Q86UW7 1296 aa17.16■□□□□ 0.34
IGKV3D-20-201ENST00000390270 ATF3P18847 181 aa17.15■□□□□ 0.34
IGKV3D-20-201ENST00000390270 RGPD8O14715 1765 aaPredicted RBP17.15■□□□□ 0.34
IGKV3D-20-201ENST00000390270 DHX57Q6P158 1386 aaKnown RBP17.15■□□□□ 0.34
IGKV3D-20-201ENST00000390270 KIAA1210Q9ULL0 1709 aa17.14■□□□□ 0.33
IGKV3D-20-201ENST00000390270 PLEKHH1Q9ULM0 1364 aa17.14■□□□□ 0.33
IGKV3D-20-201ENST00000390270 C1orf167Q5SNV9 1468 aa17.13■□□□□ 0.33
IGKV3D-20-201ENST00000390270 DLC1Q96QB1 1528 aa17.12■□□□□ 0.33
IGKV3D-20-201ENST00000390270 TMEM132EQ6IEE7 984 aa17.12■□□□□ 0.33
IGKV3D-20-201ENST00000390270 ABCC11Q96J66 1382 aa17.12■□□□□ 0.33
IGKV3D-20-201ENST00000390270 ADGRB2O60241 1585 aa17.11■□□□□ 0.33
IGKV3D-20-201ENST00000390270 BRINP3Q76B58 766 aa17.11■□□□□ 0.33
IGKV3D-20-201ENST00000390270 CFAP70Q5T0N1 1121 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms