RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 PPP1R15AO75807 674 aaPredicted RBP27.51■■□□□ 1.99
CD9-204ENST00000382519 BCANQ96GW7 911 aa27.51■■□□□ 1.99
CD9-204ENST00000382519 PIP4K2BP78356 416 aa27.5■■□□□ 1.99
CD9-204ENST00000382519 SLC26A8Q96RN1 970 aa27.5■■□□□ 1.99
CD9-204ENST00000382519 SENP3Q9H4L4 574 aaPredicted RBP27.5■■□□□ 1.99
CD9-204ENST00000382519 XIRP1Q702N8 1843 aaKnown RBP27.49■■□□□ 1.99
CD9-204ENST00000382519 ALKQ9UM73 1620 aa27.46■■□□□ 1.99
CD9-204ENST00000382519 HDGFP51858 240 aaKnown RBP27.46■■□□□ 1.99
CD9-204ENST00000382519 PLEKHG1Q9ULL1 1385 aa27.46■■□□□ 1.99
CD9-204ENST00000382519 NWD1Q149M9 1564 aa27.43■■□□□ 1.98
CD9-204ENST00000382519 TRIM52Q96A61 297 aa27.43■■□□□ 1.98
CD9-204ENST00000382519 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.42■■□□□ 1.98
CD9-204ENST00000382519 CLTCL1P53675 1640 aa27.41■■□□□ 1.98
CD9-204ENST00000382519 NUTM2DQ5VT03 806 aaPredicted RBP27.41■■□□□ 1.98
CD9-204ENST00000382519 TRPM2O94759 1503 aa27.41■■□□□ 1.98
CD9-204ENST00000382519 KCNA6P17658 529 aa27.4■■□□□ 1.98
CD9-204ENST00000382519 NKTRP30414 1462 aaKnown RBP27.38■■□□□ 1.97
CD9-204ENST00000382519 CHD2O14647 1828 aaKnown RBP27.38■■□□□ 1.97
CD9-204ENST00000382519 KIF1BO60333 1816 aa27.38■■□□□ 1.97
CD9-204ENST00000382519 TMEM94Q12767 1356 aa27.36■■□□□ 1.97
CD9-204ENST00000382519 DIP2AQ14689 1571 aa27.36■■□□□ 1.97
CD9-204ENST00000382519 DISP3Q9P2K9 1392 aa27.35■■□□□ 1.97
CD9-204ENST00000382519 HSPA1LP34931 641 aa27.35■■□□□ 1.97
CD9-204ENST00000382519 ZNF326Q5BKZ1 582 aaKnown RBP27.33■■□□□ 1.97
CD9-204ENST00000382519 PROSER2Q86WR7 435 aaPredicted RBP27.33■■□□□ 1.97
CD9-204ENST00000382519 SLC4A1APQ9BWU0 796 aaKnown RBP27.32■■□□□ 1.96
CD9-204ENST00000382519 ADAMTS13Q76LX8 1427 aa27.32■■□□□ 1.96
CD9-204ENST00000382519 RBM33Q96EV2 1170 aaKnown RBP27.3■■□□□ 1.96
CD9-204ENST00000382519 TBX22Q9Y458 520 aa27.29■■□□□ 1.96
CD9-204ENST00000382519 NRXN3Q9Y4C0 1643 aa27.27■■□□□ 1.96
CD9-204ENST00000382519 NEXMIFQ5QGS0 1516 aa27.26■■□□□ 1.96
CD9-204ENST00000382519 SETBP1Q9Y6X0 1596 aa27.25■■□□□ 1.95
CD9-204ENST00000382519 MSH6P52701 1360 aa27.22■■□□□ 1.95
CD9-204ENST00000382519 PIK3R4Q99570 1358 aa27.22■■□□□ 1.95
CD9-204ENST00000382519 FOXD1Q16676 465 aa27.19■■□□□ 1.94
CD9-204ENST00000382519 ROBO1Q9Y6N7 1651 aa27.19■■□□□ 1.94
CD9-204ENST00000382519 MED1Q15648 1581 aaPredicted RBP27.18■■□□□ 1.94
CD9-204ENST00000382519 XRN1Q8IZH2 1706 aaKnown RBP27.17■■□□□ 1.94
CD9-204ENST00000382519 PTPRUQ92729 1446 aa27.16■■□□□ 1.94
CD9-204ENST00000382519 C14orf37Q86TY3 774 aa27.16■■□□□ 1.94
CD9-204ENST00000382519 SETD5Q9C0A6 1442 aa27.16■■□□□ 1.94
CD9-204ENST00000382519 PPLO60437 1756 aa27.15■■□□□ 1.94
CD9-204ENST00000382519 FAM135BQ49AJ0 1406 aa27.15■■□□□ 1.94
CD9-204ENST00000382519 MPHOSPH9Q99550 1183 aa27.13■■□□□ 1.93
CD9-204ENST00000382519 AMOTL2Q9Y2J4 779 aa27.13■■□□□ 1.93
CD9-204ENST00000382519 NCOA3Q9Y6Q9 1424 aa27.13■■□□□ 1.93
CD9-204ENST00000382519 CCDC144AA2RUR9 1427 aa27.12■■□□□ 1.93
CD9-204ENST00000382519 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.12■■□□□ 1.93
CD9-204ENST00000382519 METP08581 1390 aa27.1■■□□□ 1.93
CD9-204ENST00000382519 SETD1AO15047 1707 aaKnown RBP27.08■■□□□ 1.93
CD9-204ENST00000382519 ILDR2Q71H61 639 aa27.08■■□□□ 1.93
CD9-204ENST00000382519 ACIN1Q9UKV3 1341 aaKnown RBP27.08■■□□□ 1.93
CD9-204ENST00000382519 VGFO15240 615 aaPredicted RBP27.07■■□□□ 1.92
CD9-204ENST00000382519 RPGRIP1LQ68CZ1 1315 aa27.07■■□□□ 1.92
CD9-204ENST00000382519 SLAIN2Q9P270 581 aa27.06■■□□□ 1.92
CD9-204ENST00000382519 RAB3GAP2Q9H2M9 1393 aa27.06■■□□□ 1.92
CD9-204ENST00000382519 PHLPP1O60346 1717 aa27.04■■□□□ 1.92
CD9-204ENST00000382519 C19orf44Q9H6X5 657 aa27.03■■□□□ 1.92
CD9-204ENST00000382519 IFT172Q9UG01 1749 aa27.03■■□□□ 1.92
CD9-204ENST00000382519 ATF3P18847 181 aa27.02■■□□□ 1.92
CD9-204ENST00000382519 CADPS2Q86UW7 1296 aa27.01■■□□□ 1.91
CD9-204ENST00000382519 SPATA31E1Q6ZUB1 1445 aa27■■□□□ 1.91
CD9-204ENST00000382519 RGL3Q3MIN7 710 aa26.99■■□□□ 1.91
CD9-204ENST00000382519 NALCNQ8IZF0 1738 aa26.99■■□□□ 1.91
CD9-204ENST00000382519 DCCP43146 1447 aa26.98■■□□□ 1.91
CD9-204ENST00000382519 PHF23Q9BUL5 403 aaPredicted RBP26.97■■□□□ 1.91
CD9-204ENST00000382519 PTCH1Q13635 1447 aa26.94■■□□□ 1.9
CD9-204ENST00000382519 ADGRL3Q9HAR2 1447 aa26.94■■□□□ 1.9
CD9-204ENST00000382519 COL16A1Q07092 1604 aaPredicted RBP26.93■■□□□ 1.9
CD9-204ENST00000382519 ANKRD30BQ9BXX2 1392 aa26.93■■□□□ 1.9
CD9-204ENST00000382519 ADGRF5Q8IZF2 1346 aa26.91■■□□□ 1.9
CD9-204ENST00000382519 AHDC1Q5TGY3 1603 aaPredicted RBP26.9■■□□□ 1.9
CD9-204ENST00000382519 MST1RQ04912 1400 aa26.89■■□□□ 1.89
CD9-204ENST00000382519 ROBO2Q9HCK4 1378 aa26.88■■□□□ 1.89
CD9-204ENST00000382519 PRAG1Q86YV5 1406 aa26.88■■□□□ 1.89
CD9-204ENST00000382519 ASXL1Q8IXJ9 1541 aa26.86■■□□□ 1.89
CD9-204ENST00000382519 PIK3C2GO75747 1445 aa26.85■■□□□ 1.89
CD9-204ENST00000382519 BRINP3Q76B58 766 aa26.85■■□□□ 1.89
CD9-204ENST00000382519 JCADQ9P266 1359 aa26.84■■□□□ 1.89
CD9-204ENST00000382519 SOCS7O14512 581 aa26.84■■□□□ 1.89
CD9-204ENST00000382519 NHSL1Q5SYE7 1610 aa26.82■■□□□ 1.88
CD9-204ENST00000382519 KNDC1Q76NI1 1749 aa26.82■■□□□ 1.88
CD9-204ENST00000382519 MYOM2P54296 1465 aa26.81■■□□□ 1.88
CD9-204ENST00000382519 LAMC1P11047 1609 aa26.8■■□□□ 1.88
CD9-204ENST00000382519 SHPRHQ149N8 1683 aa26.79■■□□□ 1.88
CD9-204ENST00000382519 HRCP23327 699 aa26.78■■□□□ 1.88
CD9-204ENST00000382519 STK26Q9P289 416 aa26.78■■□□□ 1.88
CD9-204ENST00000382519 C1orf167Q5SNV9 1468 aa26.76■■□□□ 1.87
CD9-204ENST00000382519 NRXN1Q9ULB1 1477 aa26.76■■□□□ 1.87
CD9-204ENST00000382519 LRPPRCP42704 1394 aaKnown RBP26.76■■□□□ 1.87
CD9-204ENST00000382519 TECPR2O15040 1411 aa26.75■■□□□ 1.87
CD9-204ENST00000382519 TMEM132EQ6IEE7 984 aa26.75■■□□□ 1.87
CD9-204ENST00000382519 CDC42BPGQ6DT37 1551 aa26.75■■□□□ 1.87
CD9-204ENST00000382519 YTHDC2Q9H6S0 1430 aaKnown RBP26.73■■□□□ 1.87
CD9-204ENST00000382519 RGS17Q9UGC6 210 aaPredicted RBP26.71■■□□□ 1.87
CD9-204ENST00000382519 ABCC11Q96J66 1382 aa26.71■■□□□ 1.87
CD9-204ENST00000382519 SPATA31A6Q5VVP1 1343 aa26.7■■□□□ 1.87
CD9-204ENST00000382519 LRP6O75581 1613 aa26.7■■□□□ 1.86
CD9-204ENST00000382519 DDX17Q92841 729 aaKnown RBP26.69■■□□□ 1.86
CD9-204ENST00000382519 C14orf93Q9H972 538 aaKnown RBP26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms