RNA–Protein interactions for RNA: ENST00000380150.2

CDKN2A-202, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-202ENST00000380150 PPARGC1BQ86YN6 1023 aaKnown RBP31.14■■■□□ 2.58
CDKN2A-202ENST00000380150 PROSER2Q86WR7 435 aaPredicted RBP31.13■■■□□ 2.57
CDKN2A-202ENST00000380150 BCANQ96GW7 911 aa31.13■■■□□ 2.57
CDKN2A-202ENST00000380150 PHF23Q9BUL5 403 aaPredicted RBP31.13■■■□□ 2.57
CDKN2A-202ENST00000380150 TMEM131LA2VDJ0 1609 aa31.12■■■□□ 2.57
CDKN2A-202ENST00000380150 NWD1Q149M9 1564 aa31.11■■■□□ 2.57
CDKN2A-202ENST00000380150 E9PCH4 1651 aa31.1■■■□□ 2.57
CDKN2A-202ENST00000380150 RIMS2Q9UQ26 1411 aa31.1■■■□□ 2.57
CDKN2A-202ENST00000380150 ITGAEP38570 1179 aa31.08■■■□□ 2.57
CDKN2A-202ENST00000380150 FAM135BQ49AJ0 1406 aa31.07■■■□□ 2.57
CDKN2A-202ENST00000380150 ROCK1Q13464 1354 aa31.07■■■□□ 2.56
CDKN2A-202ENST00000380150 PLEKHG1Q9ULL1 1385 aa31.06■■■□□ 2.56
CDKN2A-202ENST00000380150 NUTM2DQ5VT03 806 aaPredicted RBP31.06■■■□□ 2.56
CDKN2A-202ENST00000380150 CHGAP10645 457 aaKnown RBP31.05■■■□□ 2.56
CDKN2A-202ENST00000380150 NKTRP30414 1462 aaKnown RBP31.05■■■□□ 2.56
CDKN2A-202ENST00000380150 ROBO1Q9Y6N7 1651 aa31.03■■■□□ 2.56
CDKN2A-202ENST00000380150 IQGAP3Q86VI3 1631 aa31.03■■■□□ 2.56
CDKN2A-202ENST00000380150 PPP1R15AO75807 674 aaPredicted RBP31.03■■■□□ 2.56
CDKN2A-202ENST00000380150 RGS17Q9UGC6 210 aaPredicted RBP31.01■■■□□ 2.55
CDKN2A-202ENST00000380150 CHD2O14647 1828 aaKnown RBP30.99■■■□□ 2.55
CDKN2A-202ENST00000380150 NUP155O75694 1391 aa30.99■■■□□ 2.55
CDKN2A-202ENST00000380150 ADAMTS13Q76LX8 1427 aa30.96■■■□□ 2.55
CDKN2A-202ENST00000380150 MSH6P52701 1360 aa30.95■■■□□ 2.55
CDKN2A-202ENST00000380150 HDGFP51858 240 aaKnown RBP30.94■■■□□ 2.54
CDKN2A-202ENST00000380150 TBX22Q9Y458 520 aa30.94■■■□□ 2.54
CDKN2A-202ENST00000380150 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.91■■■□□ 2.54
CDKN2A-202ENST00000380150 SLAIN2Q9P270 581 aa30.91■■■□□ 2.54
CDKN2A-202ENST00000380150 PHLPP1O60346 1717 aa30.84■■■□□ 2.53
CDKN2A-202ENST00000380150 PTPRUQ92729 1446 aa30.83■■■□□ 2.53
CDKN2A-202ENST00000380150 DIP2AQ14689 1571 aa30.83■■■□□ 2.53
CDKN2A-202ENST00000380150 POTEAQ6S8J7 498 aa30.81■■■□□ 2.52
CDKN2A-202ENST00000380150 C14orf37Q86TY3 774 aa30.81■■■□□ 2.52
CDKN2A-202ENST00000380150 SPHKAPQ2M3C7 1700 aa30.79■■■□□ 2.52
CDKN2A-202ENST00000380150 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.78■■■□□ 2.52
CDKN2A-202ENST00000380150 NRXN3Q9Y4C0 1643 aa30.78■■■□□ 2.52
CDKN2A-202ENST00000380150 NCOA3Q9Y6Q9 1424 aa30.78■■■□□ 2.52
CDKN2A-202ENST00000380150 PIK3R4Q99570 1358 aa30.78■■■□□ 2.52
CDKN2A-202ENST00000380150 AMOTL2Q9Y2J4 779 aa30.77■■■□□ 2.52
CDKN2A-202ENST00000380150 TRPM2O94759 1503 aa30.77■■■□□ 2.52
CDKN2A-202ENST00000380150 COL16A1Q07092 1604 aaPredicted RBP30.76■■■□□ 2.51
CDKN2A-202ENST00000380150 C19orf44Q9H6X5 657 aa30.73■■■□□ 2.51
CDKN2A-202ENST00000380150 RRBP1Q9P2E9 1410 aaKnown RBP30.73■■■□□ 2.51
CDKN2A-202ENST00000380150 JCADQ9P266 1359 aa30.72■■■□□ 2.51
CDKN2A-202ENST00000380150 ZNF326Q5BKZ1 582 aaKnown RBP30.72■■■□□ 2.51
CDKN2A-202ENST00000380150 CLTCL1P53675 1640 aa30.71■■■□□ 2.51
CDKN2A-202ENST00000380150 NAIPQ13075 1403 aa30.7■■■□□ 2.5
CDKN2A-202ENST00000380150 SETBP1Q9Y6X0 1596 aa30.7■■■□□ 2.5
CDKN2A-202ENST00000380150 ATF3P18847 181 aa30.69■■■□□ 2.5
CDKN2A-202ENST00000380150 CADPS2Q86UW7 1296 aa30.69■■■□□ 2.5
CDKN2A-202ENST00000380150 METP08581 1390 aa30.68■■■□□ 2.5
CDKN2A-202ENST00000380150 XRN1Q8IZH2 1706 aaKnown RBP30.68■■■□□ 2.5
CDKN2A-202ENST00000380150 LRP6O75581 1613 aa30.65■■■□□ 2.5
CDKN2A-202ENST00000380150 NEXMIFQ5QGS0 1516 aa30.64■■■□□ 2.5
CDKN2A-202ENST00000380150 AHDC1Q5TGY3 1603 aaPredicted RBP30.64■■■□□ 2.5
CDKN2A-202ENST00000380150 BRINP3Q76B58 766 aa30.63■■■□□ 2.49
CDKN2A-202ENST00000380150 SETD1AO15047 1707 aaKnown RBP30.56■■■□□ 2.48
CDKN2A-202ENST00000380150 DCCP43146 1447 aa30.56■■■□□ 2.48
CDKN2A-202ENST00000380150 MST1RQ04912 1400 aa30.56■■■□□ 2.48
CDKN2A-202ENST00000380150 TRIM52Q96A61 297 aa30.55■■■□□ 2.48
CDKN2A-202ENST00000380150 SPATA31A6Q5VVP1 1343 aa30.54■■■□□ 2.48
CDKN2A-202ENST00000380150 ASXL1Q8IXJ9 1541 aa30.54■■■□□ 2.48
CDKN2A-202ENST00000380150 SHPRHQ149N8 1683 aa30.54■■■□□ 2.48
CDKN2A-202ENST00000380150 KIF1BO60333 1816 aa30.54■■■□□ 2.48
CDKN2A-202ENST00000380150 HFM1A2PYH4 1435 aa30.52■■■□□ 2.48
CDKN2A-202ENST00000380150 NALCNQ8IZF0 1738 aa30.5■■■□□ 2.47
CDKN2A-202ENST00000380150 MEX3CQ5U5Q3 659 aaKnown RBP30.5■■■□□ 2.47
CDKN2A-202ENST00000380150 DDX17Q92841 729 aaKnown RBP30.5■■■□□ 2.47
CDKN2A-202ENST00000380150 ADGRL3Q9HAR2 1447 aa30.49■■■□□ 2.47
CDKN2A-202ENST00000380150 NUTM2BA6NNL0 878 aaPredicted RBP30.47■■■□□ 2.47
CDKN2A-202ENST00000380150 NUTM2EB1AL46 878 aaPredicted RBP30.47■■■□□ 2.47
CDKN2A-202ENST00000380150 NUTM2AQ8IVF1 878 aaPredicted RBP30.47■■■□□ 2.47
CDKN2A-202ENST00000380150 SLC4A1APQ9BWU0 796 aaKnown RBP30.46■■■□□ 2.47
CDKN2A-202ENST00000380150 NHSL1Q5SYE7 1610 aa30.46■■■□□ 2.47
CDKN2A-202ENST00000380150 FOXD1Q16676 465 aa30.45■■■□□ 2.47
CDKN2A-202ENST00000380150 SETD5Q9C0A6 1442 aa30.43■■■□□ 2.46
CDKN2A-202ENST00000380150 ROBO2Q9HCK4 1378 aa30.42■■■□□ 2.46
CDKN2A-202ENST00000380150 VGFO15240 615 aaPredicted RBP30.4■■■□□ 2.46
CDKN2A-202ENST00000380150 ZNF772Q68DY9 489 aaPredicted RBP30.38■■■□□ 2.45
CDKN2A-202ENST00000380150 PPLO60437 1756 aa30.37■■■□□ 2.45
CDKN2A-202ENST00000380150 PTCH1Q13635 1447 aa30.37■■■□□ 2.45
CDKN2A-202ENST00000380150 C1orf167Q5SNV9 1468 aa30.37■■■□□ 2.45
CDKN2A-202ENST00000380150 RPGRIP1LQ68CZ1 1315 aa30.34■■■□□ 2.45
CDKN2A-202ENST00000380150 LRRC59Q96AG4 307 aaKnown RBP30.34■■■□□ 2.45
CDKN2A-202ENST00000380150 PNPLA6Q8IY17 1366 aa30.33■■■□□ 2.45
CDKN2A-202ENST00000380150 ORAI2Q96SN7 254 aa30.33■■■□□ 2.45
CDKN2A-202ENST00000380150 AFF2P51816 1311 aa30.31■■■□□ 2.44
CDKN2A-202ENST00000380150 ADGRF5Q8IZF2 1346 aa30.29■■■□□ 2.44
CDKN2A-202ENST00000380150 PRAG1Q86YV5 1406 aa30.29■■■□□ 2.44
CDKN2A-202ENST00000380150 RXRBP28702 533 aa30.27■■■□□ 2.44
CDKN2A-202ENST00000380150 RGL3Q3MIN7 710 aa30.26■■■□□ 2.43
CDKN2A-202ENST00000380150 C8orf37Q96NL8 207 aa30.26■■■□□ 2.43
CDKN2A-202ENST00000380150 LAMC1P11047 1609 aa30.25■■■□□ 2.43
CDKN2A-202ENST00000380150 UPF1Q92900 1129 aaKnown RBP eCLIP30.24■■■□□ 2.43
CDKN2A-202ENST00000380150 SPATA31E1Q6ZUB1 1445 aa30.23■■■□□ 2.43
CDKN2A-202ENST00000380150 MPHOSPH9Q99550 1183 aa30.23■■■□□ 2.43
CDKN2A-202ENST00000380150 CCDC144AA2RUR9 1427 aa30.22■■■□□ 2.43
CDKN2A-202ENST00000380150 SOS2Q07890 1332 aaPredicted RBP30.22■■■□□ 2.43
CDKN2A-202ENST00000380150 ADAMTS2O95450 1211 aa30.21■■■□□ 2.43
CDKN2A-202ENST00000380150 STK26Q9P289 416 aa30.19■■■□□ 2.42
CDKN2A-202ENST00000380150 IFT172Q9UG01 1749 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms