RNA–Protein interactions for RNA: ENST00000378543.2

FAAP20-201, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-201ENST00000378543 RIMS2Q9UQ26 1411 aa35.6■■■■□ 3.29
FAAP20-201ENST00000378543 XIRP1Q702N8 1843 aaKnown RBP35.57■■■■□ 3.28
FAAP20-201ENST00000378543 SPHKAPQ2M3C7 1700 aa35.55■■■■□ 3.28
FAAP20-201ENST00000378543 SENP3Q9H4L4 574 aaPredicted RBP35.55■■■■□ 3.28
FAAP20-201ENST00000378543 BCANQ96GW7 911 aa35.54■■■■□ 3.28
FAAP20-201ENST00000378543 HDGFP51858 240 aaKnown RBP35.53■■■■□ 3.28
FAAP20-201ENST00000378543 PLEKHG1Q9ULL1 1385 aa35.52■■■■□ 3.28
FAAP20-201ENST00000378543 HFM1A2PYH4 1435 aa35.51■■■■□ 3.28
FAAP20-201ENST00000378543 PPP1R15AO75807 674 aaPredicted RBP35.51■■■■□ 3.28
FAAP20-201ENST00000378543 KCNA6P17658 529 aa35.51■■■■□ 3.28
FAAP20-201ENST00000378543 HSPA1LP34931 641 aa35.47■■■■□ 3.27
FAAP20-201ENST00000378543 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.47■■■■□ 3.27
FAAP20-201ENST00000378543 NUTM2DQ5VT03 806 aaPredicted RBP35.46■■■■□ 3.27
FAAP20-201ENST00000378543 DISP3Q9P2K9 1392 aa35.46■■■■□ 3.27
FAAP20-201ENST00000378543 NWD1Q149M9 1564 aa35.45■■■■□ 3.27
FAAP20-201ENST00000378543 TMEM94Q12767 1356 aa35.42■■■■□ 3.26
FAAP20-201ENST00000378543 TRIM52Q96A61 297 aa35.42■■■■□ 3.26
FAAP20-201ENST00000378543 CHD2O14647 1828 aaKnown RBP35.41■■■■□ 3.26
FAAP20-201ENST00000378543 PROSER2Q86WR7 435 aaPredicted RBP35.41■■■■□ 3.26
FAAP20-201ENST00000378543 NKTRP30414 1462 aaKnown RBP35.39■■■■□ 3.26
FAAP20-201ENST00000378543 RBM33Q96EV2 1170 aaKnown RBP35.38■■■■□ 3.25
FAAP20-201ENST00000378543 TBX22Q9Y458 520 aa35.38■■■■□ 3.25
FAAP20-201ENST00000378543 CLTCL1P53675 1640 aa35.38■■■■□ 3.25
FAAP20-201ENST00000378543 ADAMTS13Q76LX8 1427 aa35.37■■■■□ 3.25
FAAP20-201ENST00000378543 TRPM2O94759 1503 aa35.37■■■■□ 3.25
FAAP20-201ENST00000378543 DIP2AQ14689 1571 aa35.31■■■■□ 3.24
FAAP20-201ENST00000378543 ZNF326Q5BKZ1 582 aaKnown RBP35.3■■■■□ 3.24
FAAP20-201ENST00000378543 SLC4A1APQ9BWU0 796 aaKnown RBP35.3■■■■□ 3.24
FAAP20-201ENST00000378543 KIF1BO60333 1816 aa35.29■■■■□ 3.24
FAAP20-201ENST00000378543 NRXN3Q9Y4C0 1643 aa35.24■■■■□ 3.23
FAAP20-201ENST00000378543 PIK3R4Q99570 1358 aa35.24■■■■□ 3.23
FAAP20-201ENST00000378543 ILDR2Q71H61 639 aa35.23■■■■□ 3.23
FAAP20-201ENST00000378543 NEXMIFQ5QGS0 1516 aa35.22■■■■□ 3.23
FAAP20-201ENST00000378543 SETBP1Q9Y6X0 1596 aa35.21■■■■□ 3.23
FAAP20-201ENST00000378543 MSH6P52701 1360 aa35.2■■■■□ 3.23
FAAP20-201ENST00000378543 FAM135BQ49AJ0 1406 aa35.19■■■■□ 3.22
FAAP20-201ENST00000378543 PTPRUQ92729 1446 aa35.18■■■■□ 3.22
FAAP20-201ENST00000378543 MED1Q15648 1581 aaPredicted RBP35.17■■■■□ 3.22
FAAP20-201ENST00000378543 FOXD1Q16676 465 aa35.16■■■■□ 3.22
FAAP20-201ENST00000378543 AMOTL2Q9Y2J4 779 aa35.15■■■■□ 3.22
FAAP20-201ENST00000378543 ROBO1Q9Y6N7 1651 aa35.14■■■■□ 3.22
FAAP20-201ENST00000378543 NCOA3Q9Y6Q9 1424 aa35.14■■■■□ 3.22
FAAP20-201ENST00000378543 ACIN1Q9UKV3 1341 aaKnown RBP35.1■■■■□ 3.21
FAAP20-201ENST00000378543 MPHOSPH9Q99550 1183 aa35.1■■■■□ 3.21
FAAP20-201ENST00000378543 METP08581 1390 aa35.09■■■■□ 3.21
FAAP20-201ENST00000378543 XRN1Q8IZH2 1706 aaKnown RBP35.09■■■■□ 3.21
FAAP20-201ENST00000378543 C14orf37Q86TY3 774 aa35.08■■■■□ 3.21
FAAP20-201ENST00000378543 SLAIN2Q9P270 581 aa35.07■■■■□ 3.2
FAAP20-201ENST00000378543 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.06■■■■□ 3.2
FAAP20-201ENST00000378543 SETD5Q9C0A6 1442 aa35.06■■■■□ 3.2
FAAP20-201ENST00000378543 RPGRIP1LQ68CZ1 1315 aa35.03■■■■□ 3.2
FAAP20-201ENST00000378543 PPLO60437 1756 aa35.02■■■■□ 3.2
FAAP20-201ENST00000378543 VGFO15240 615 aaPredicted RBP35.02■■■■□ 3.2
FAAP20-201ENST00000378543 C19orf44Q9H6X5 657 aa35.02■■■■□ 3.2
FAAP20-201ENST00000378543 CCDC144AA2RUR9 1427 aa34.99■■■■□ 3.19
FAAP20-201ENST00000378543 SETD1AO15047 1707 aaKnown RBP34.98■■■■□ 3.19
FAAP20-201ENST00000378543 CADPS2Q86UW7 1296 aa34.97■■■■□ 3.19
FAAP20-201ENST00000378543 ATF3P18847 181 aa34.95■■■■□ 3.19
FAAP20-201ENST00000378543 RAB3GAP2Q9H2M9 1393 aa34.94■■■■□ 3.18
FAAP20-201ENST00000378543 PHLPP1O60346 1717 aa34.93■■■■□ 3.18
FAAP20-201ENST00000378543 SPATA31E1Q6ZUB1 1445 aa34.91■■■■□ 3.18
FAAP20-201ENST00000378543 RGL3Q3MIN7 710 aa34.9■■■■□ 3.18
FAAP20-201ENST00000378543 SOCS7O14512 581 aa34.89■■■■□ 3.18
FAAP20-201ENST00000378543 PHF23Q9BUL5 403 aaPredicted RBP34.89■■■■□ 3.18
FAAP20-201ENST00000378543 DCCP43146 1447 aa34.88■■■■□ 3.17
FAAP20-201ENST00000378543 IFT172Q9UG01 1749 aa34.87■■■■□ 3.17
FAAP20-201ENST00000378543 ADGRF5Q8IZF2 1346 aa34.84■■■■□ 3.17
FAAP20-201ENST00000378543 NALCNQ8IZF0 1738 aa34.84■■■■□ 3.17
FAAP20-201ENST00000378543 COL16A1Q07092 1604 aaPredicted RBP34.83■■■■□ 3.17
FAAP20-201ENST00000378543 ADGRL3Q9HAR2 1447 aa34.82■■■■□ 3.17
FAAP20-201ENST00000378543 PTCH1Q13635 1447 aa34.81■■■■□ 3.16
FAAP20-201ENST00000378543 ANKRD30BQ9BXX2 1392 aa34.79■■■■□ 3.16
FAAP20-201ENST00000378543 ROBO2Q9HCK4 1378 aa34.79■■■■□ 3.16
FAAP20-201ENST00000378543 BRINP3Q76B58 766 aa34.79■■■■□ 3.16
FAAP20-201ENST00000378543 AHDC1Q5TGY3 1603 aaPredicted RBP34.79■■■■□ 3.16
FAAP20-201ENST00000378543 MST1RQ04912 1400 aa34.79■■■■□ 3.16
FAAP20-201ENST00000378543 PRAG1Q86YV5 1406 aa34.77■■■■□ 3.16
FAAP20-201ENST00000378543 JCADQ9P266 1359 aa34.75■■■■□ 3.15
FAAP20-201ENST00000378543 ASXL1Q8IXJ9 1541 aa34.72■■■■□ 3.15
FAAP20-201ENST00000378543 RGS17Q9UGC6 210 aaPredicted RBP34.72■■■■□ 3.15
FAAP20-201ENST00000378543 HRCP23327 699 aa34.71■■■■□ 3.15
FAAP20-201ENST00000378543 PIK3C2GO75747 1445 aa34.69■■■■□ 3.14
FAAP20-201ENST00000378543 NHSL1Q5SYE7 1610 aa34.66■■■■□ 3.14
FAAP20-201ENST00000378543 TMEM132EQ6IEE7 984 aa34.64■■■■□ 3.14
FAAP20-201ENST00000378543 STK26Q9P289 416 aa34.64■■■■□ 3.14
FAAP20-201ENST00000378543 SHPRHQ149N8 1683 aa34.63■■■■□ 3.13
FAAP20-201ENST00000378543 C1orf167Q5SNV9 1468 aa34.63■■■■□ 3.13
FAAP20-201ENST00000378543 LRPPRCP42704 1394 aaKnown RBP34.62■■■■□ 3.13
FAAP20-201ENST00000378543 TECPR2O15040 1411 aa34.6■■■■□ 3.13
FAAP20-201ENST00000378543 MYOM2P54296 1465 aa34.59■■■■□ 3.13
FAAP20-201ENST00000378543 NRXN1Q9ULB1 1477 aa34.59■■■■□ 3.13
FAAP20-201ENST00000378543 KNDC1Q76NI1 1749 aa34.59■■■■□ 3.13
FAAP20-201ENST00000378543 DDX17Q92841 729 aaKnown RBP34.59■■■■□ 3.13
FAAP20-201ENST00000378543 SPATA31A6Q5VVP1 1343 aa34.58■■■■□ 3.13
FAAP20-201ENST00000378543 ABCC11Q96J66 1382 aa34.58■■■■□ 3.13
FAAP20-201ENST00000378543 LRP6O75581 1613 aa34.57■■■■□ 3.12
FAAP20-201ENST00000378543 WAPLQ7Z5K2 1190 aa34.57■■■■□ 3.12
FAAP20-201ENST00000378543 C14orf93Q9H972 538 aaKnown RBP34.57■■■■□ 3.12
FAAP20-201ENST00000378543 YTHDC2Q9H6S0 1430 aaKnown RBP34.55■■■■□ 3.12
FAAP20-201ENST00000378543 CFAP70Q5T0N1 1121 aa34.54■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms