RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 ZFYVE9O95405 1425 aa29.38■■■□□ 2.29
RER1-204ENST00000378518 ZNF326Q5BKZ1 582 aaKnown RBP29.38■■■□□ 2.29
RER1-204ENST00000378518 LTKP29376 864 aa29.37■■■□□ 2.29
RER1-204ENST00000378518 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.37■■■□□ 2.29
RER1-204ENST00000378518 PPP1R15AO75807 674 aaPredicted RBP29.35■■■□□ 2.29
RER1-204ENST00000378518 PCGF6Q9BYE7 350 aa29.35■■■□□ 2.29
RER1-204ENST00000378518 ANKRD30BQ9BXX2 1392 aa29.35■■■□□ 2.29
RER1-204ENST00000378518 NEXMIFQ5QGS0 1516 aa29.3■■■□□ 2.28
RER1-204ENST00000378518 PPLO60437 1756 aa29.3■■■□□ 2.28
RER1-204ENST00000378518 PLEKHG1Q9ULL1 1385 aa29.27■■■□□ 2.28
RER1-204ENST00000378518 RPGRIP1LQ68CZ1 1315 aa29.27■■■□□ 2.28
RER1-204ENST00000378518 BCANQ96GW7 911 aa29.27■■■□□ 2.28
RER1-204ENST00000378518 SPATA31E1Q6ZUB1 1445 aa29.27■■■□□ 2.28
RER1-204ENST00000378518 NUTM2DQ5VT03 806 aaPredicted RBP29.25■■■□□ 2.27
RER1-204ENST00000378518 IFT172Q9UG01 1749 aa29.25■■■□□ 2.27
RER1-204ENST00000378518 DHX57Q6P158 1386 aaKnown RBP29.25■■■□□ 2.27
RER1-204ENST00000378518 RGL3Q3MIN7 710 aa29.22■■■□□ 2.27
RER1-204ENST00000378518 DIP2AQ14689 1571 aa29.2■■■□□ 2.26
RER1-204ENST00000378518 VGFO15240 615 aaPredicted RBP29.19■■■□□ 2.26
RER1-204ENST00000378518 SETBP1Q9Y6X0 1596 aa29.18■■■□□ 2.26
RER1-204ENST00000378518 ZNF335Q9H4Z2 1342 aaPredicted RBP29.17■■■□□ 2.26
RER1-204ENST00000378518 SENP3Q9H4L4 574 aaPredicted RBP29.16■■■□□ 2.26
RER1-204ENST00000378518 SLC26A8Q96RN1 970 aa29.15■■■□□ 2.26
RER1-204ENST00000378518 LTBP4Q8N2S1 1624 aa29.15■■■□□ 2.26
RER1-204ENST00000378518 NRXN3Q9Y4C0 1643 aa29.15■■■□□ 2.26
RER1-204ENST00000378518 CPS1P31327 1500 aa29.12■■■□□ 2.25
RER1-204ENST00000378518 ADAMTS13Q76LX8 1427 aa29.11■■■□□ 2.25
RER1-204ENST00000378518 STRCP1A6NGW2 1772 aa29.11■■■□□ 2.25
RER1-204ENST00000378518 TBX22Q9Y458 520 aa29.1■■■□□ 2.25
RER1-204ENST00000378518 CHD2O14647 1828 aaKnown RBP29.09■■■□□ 2.25
RER1-204ENST00000378518 MYOM2P54296 1465 aa29.09■■■□□ 2.25
RER1-204ENST00000378518 NWD1Q149M9 1564 aa29.06■■■□□ 2.24
RER1-204ENST00000378518 PIK3R4Q99570 1358 aa29.04■■■□□ 2.24
RER1-204ENST00000378518 SETD1AO15047 1707 aaKnown RBP29.04■■■□□ 2.24
RER1-204ENST00000378518 ADGRF5Q8IZF2 1346 aa29.03■■■□□ 2.24
RER1-204ENST00000378518 ALKQ9UM73 1620 aa29.03■■■□□ 2.24
RER1-204ENST00000378518 CERKQ8TCT0 537 aa29.03■■■□□ 2.24
RER1-204ENST00000378518 KCNA6P17658 529 aa29.02■■■□□ 2.24
RER1-204ENST00000378518 STAC3Q96MF2 364 aa29.01■■■□□ 2.23
RER1-204ENST00000378518 SIN3AQ96ST3 1273 aa29.01■■■□□ 2.23
RER1-204ENST00000378518 PIK3C2GO75747 1445 aa29.01■■■□□ 2.23
RER1-204ENST00000378518 LAMC1P11047 1609 aa29.01■■■□□ 2.23
RER1-204ENST00000378518 IQSEC2Q5JU85 1478 aa29■■■□□ 2.23
RER1-204ENST00000378518 DCAF11Q8TEB1 546 aa29■■■□□ 2.23
RER1-204ENST00000378518 NKTRP30414 1462 aaKnown RBP28.99■■■□□ 2.23
RER1-204ENST00000378518 NRXN1Q9ULB1 1477 aa28.99■■■□□ 2.23
RER1-204ENST00000378518 NEUROD1Q13562 356 aa28.99■■■□□ 2.23
RER1-204ENST00000378518 KDM2AQ9Y2K7 1162 aa28.96■■■□□ 2.23
RER1-204ENST00000378518 LRRC7Q96NW7 1537 aa28.94■■■□□ 2.22
RER1-204ENST00000378518 XRN1Q8IZH2 1706 aaKnown RBP28.94■■■□□ 2.22
RER1-204ENST00000378518 METP08581 1390 aa28.94■■■□□ 2.22
RER1-204ENST00000378518 AMOTL2Q9Y2J4 779 aa28.91■■■□□ 2.22
RER1-204ENST00000378518 XIRP1Q702N8 1843 aaKnown RBP28.91■■■□□ 2.22
RER1-204ENST00000378518 PTPRUQ92729 1446 aa28.91■■■□□ 2.22
RER1-204ENST00000378518 CLSPNQ9HAW4 1339 aa28.89■■■□□ 2.21
RER1-204ENST00000378518 PROSER2Q86WR7 435 aaPredicted RBP28.88■■■□□ 2.21
RER1-204ENST00000378518 TONSLQ96HA7 1378 aa28.87■■■□□ 2.21
RER1-204ENST00000378518 L3MBTL2Q969R5 705 aa28.86■■■□□ 2.21
RER1-204ENST00000378518 C14orf93Q9H972 538 aaKnown RBP28.86■■■□□ 2.21
RER1-204ENST00000378518 KIAA1210Q9ULL0 1709 aa28.85■■■□□ 2.21
RER1-204ENST00000378518 ASXL1Q8IXJ9 1541 aa28.84■■■□□ 2.21
RER1-204ENST00000378518 KNDC1Q76NI1 1749 aa28.84■■■□□ 2.21
RER1-204ENST00000378518 CCER1Q8TC90 406 aaPredicted RBP28.84■■■□□ 2.21
RER1-204ENST00000378518 TMEM94Q12767 1356 aa28.84■■■□□ 2.21
RER1-204ENST00000378518 CFAP70Q5T0N1 1121 aa28.83■■■□□ 2.21
RER1-204ENST00000378518 PTCH1Q13635 1447 aa28.8■■■□□ 2.2
RER1-204ENST00000378518 PRAG1Q86YV5 1406 aa28.8■■■□□ 2.2
RER1-204ENST00000378518 NCOA3Q9Y6Q9 1424 aa28.79■■■□□ 2.2
RER1-204ENST00000378518 LRPPRCP42704 1394 aaKnown RBP28.78■■■□□ 2.2
RER1-204ENST00000378518 TMEM132EQ6IEE7 984 aa28.78■■■□□ 2.2
RER1-204ENST00000378518 YTHDC2Q9H6S0 1430 aaKnown RBP28.77■■■□□ 2.2
RER1-204ENST00000378518 C14orf37Q86TY3 774 aa28.76■■■□□ 2.19
RER1-204ENST00000378518 RBM33Q96EV2 1170 aaKnown RBP28.76■■■□□ 2.19
RER1-204ENST00000378518 ADGRB1O14514 1584 aa28.75■■■□□ 2.19
RER1-204ENST00000378518 FBXO41Q8TF61 875 aa28.75■■■□□ 2.19
RER1-204ENST00000378518 STK26Q9P289 416 aa28.75■■■□□ 2.19
RER1-204ENST00000378518 TECPR2O15040 1411 aa28.75■■■□□ 2.19
RER1-204ENST00000378518 MSH6P52701 1360 aa28.75■■■□□ 2.19
RER1-204ENST00000378518 ABCC11Q96J66 1382 aa28.74■■■□□ 2.19
RER1-204ENST00000378518 UBAP1LF5GYI3 381 aa28.73■■■□□ 2.19
RER1-204ENST00000378518 TOM1O60784 492 aa28.72■■■□□ 2.19
RER1-204ENST00000378518 ROBO2Q9HCK4 1378 aa28.72■■■□□ 2.19
RER1-204ENST00000378518 TRPM1Q7Z4N2 1603 aa28.72■■■□□ 2.19
RER1-204ENST00000378518 NALCNQ8IZF0 1738 aa28.71■■■□□ 2.19
RER1-204ENST00000378518 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.71■■■□□ 2.19
RER1-204ENST00000378518 DLC1Q96QB1 1528 aa28.69■■■□□ 2.18
RER1-204ENST00000378518 TIMELESSQ9UNS1 1208 aa28.66■■■□□ 2.18
RER1-204ENST00000378518 FAM135BQ49AJ0 1406 aa28.66■■■□□ 2.18
RER1-204ENST00000378518 ADGRL3Q9HAR2 1447 aa28.66■■■□□ 2.18
RER1-204ENST00000378518 C19orf44Q9H6X5 657 aa28.65■■■□□ 2.18
RER1-204ENST00000378518 ARHGEF28Q8N1W1 1705 aaKnown RBP28.64■■■□□ 2.18
RER1-204ENST00000378518 SIRT1Q96EB6 747 aa28.64■■■□□ 2.18
RER1-204ENST00000378518 DCCP43146 1447 aa28.63■■■□□ 2.17
RER1-204ENST00000378518 ATF3P18847 181 aa28.62■■■□□ 2.17
RER1-204ENST00000378518 TRAK1Q9UPV9 953 aa28.62■■■□□ 2.17
RER1-204ENST00000378518 NBPF1Q3BBV0 1214 aa28.6■■■□□ 2.17
RER1-204ENST00000378518 CADPS2Q86UW7 1296 aa28.6■■■□□ 2.17
RER1-204ENST00000378518 SCAF1Q9H7N4 1312 aaKnown RBP28.6■■■□□ 2.17
RER1-204ENST00000378518 WAPLQ7Z5K2 1190 aa28.59■■■□□ 2.17
RER1-204ENST00000378518 ROCK2O75116 1388 aaKnown RBP28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms