RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 PPP1R15AO75807 674 aaPredicted RBP32.41■■■□□ 2.78
GFRA3-202ENST00000378362 SLC26A8Q96RN1 970 aa32.41■■■□□ 2.78
GFRA3-202ENST00000378362 ZFYVE9O95405 1425 aa32.4■■■□□ 2.78
GFRA3-202ENST00000378362 TRIM26Q12899 539 aaPredicted RBP32.38■■■□□ 2.77
GFRA3-202ENST00000378362 CERKQ8TCT0 537 aa32.38■■■□□ 2.77
GFRA3-202ENST00000378362 LTBP4Q8N2S1 1624 aa32.36■■■□□ 2.77
GFRA3-202ENST00000378362 HRCP23327 699 aa32.35■■■□□ 2.77
GFRA3-202ENST00000378362 KIF1BO60333 1816 aa32.34■■■□□ 2.77
GFRA3-202ENST00000378362 RGL3Q3MIN7 710 aa32.32■■■□□ 2.76
GFRA3-202ENST00000378362 ACIN1Q9UKV3 1341 aaKnown RBP32.32■■■□□ 2.76
GFRA3-202ENST00000378362 CCDC144AA2RUR9 1427 aa32.31■■■□□ 2.76
GFRA3-202ENST00000378362 HDGFP51858 240 aaKnown RBP32.29■■■□□ 2.76
GFRA3-202ENST00000378362 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.28■■■□□ 2.76
GFRA3-202ENST00000378362 STRCP1A6NGW2 1772 aa32.25■■■□□ 2.75
GFRA3-202ENST00000378362 PLEKHG1Q9ULL1 1385 aa32.25■■■□□ 2.75
GFRA3-202ENST00000378362 ILDR1Q86SU0 546 aaPredicted RBP32.23■■■□□ 2.75
GFRA3-202ENST00000378362 ANKRD30BQ9BXX2 1392 aa32.21■■■□□ 2.75
GFRA3-202ENST00000378362 NEXMIFQ5QGS0 1516 aa32.21■■■□□ 2.75
GFRA3-202ENST00000378362 RBM33Q96EV2 1170 aaKnown RBP32.19■■■□□ 2.74
GFRA3-202ENST00000378362 SPATA31E1Q6ZUB1 1445 aa32.16■■■□□ 2.74
GFRA3-202ENST00000378362 ADAMTS13Q76LX8 1427 aa32.16■■■□□ 2.74
GFRA3-202ENST00000378362 FBXO41Q8TF61 875 aa32.12■■■□□ 2.73
GFRA3-202ENST00000378362 TBX22Q9Y458 520 aa32.11■■■□□ 2.73
GFRA3-202ENST00000378362 VGFO15240 615 aaPredicted RBP32.1■■■□□ 2.73
GFRA3-202ENST00000378362 KCNA6P17658 529 aa32.1■■■□□ 2.73
GFRA3-202ENST00000378362 PCGF6Q9BYE7 350 aa32.1■■■□□ 2.73
GFRA3-202ENST00000378362 NRXN3Q9Y4C0 1643 aa32.09■■■□□ 2.73
GFRA3-202ENST00000378362 ADGRF5Q8IZF2 1346 aa32.09■■■□□ 2.73
GFRA3-202ENST00000378362 CPS1P31327 1500 aa32.08■■■□□ 2.73
GFRA3-202ENST00000378362 PPLO60437 1756 aa32.08■■■□□ 2.73
GFRA3-202ENST00000378362 RPGRIP1LQ68CZ1 1315 aa32.08■■■□□ 2.73
GFRA3-202ENST00000378362 LRRC7Q96NW7 1537 aa32.07■■■□□ 2.72
GFRA3-202ENST00000378362 METP08581 1390 aa32.04■■■□□ 2.72
GFRA3-202ENST00000378362 PROSER2Q86WR7 435 aaPredicted RBP32.04■■■□□ 2.72
GFRA3-202ENST00000378362 UBAP1LF5GYI3 381 aa32.03■■■□□ 2.72
GFRA3-202ENST00000378362 SETBP1Q9Y6X0 1596 aa32.02■■■□□ 2.72
GFRA3-202ENST00000378362 CHD2O14647 1828 aaKnown RBP32.02■■■□□ 2.72
GFRA3-202ENST00000378362 PTPRUQ92729 1446 aa32.02■■■□□ 2.72
GFRA3-202ENST00000378362 AMOTL2Q9Y2J4 779 aa32■■■□□ 2.71
GFRA3-202ENST00000378362 KDM2AQ9Y2K7 1162 aa32■■■□□ 2.71
GFRA3-202ENST00000378362 SIN3AQ96ST3 1273 aa31.99■■■□□ 2.71
GFRA3-202ENST00000378362 TMEM94Q12767 1356 aa31.98■■■□□ 2.71
GFRA3-202ENST00000378362 DHX57Q6P158 1386 aaKnown RBP31.98■■■□□ 2.71
GFRA3-202ENST00000378362 IFT172Q9UG01 1749 aa31.97■■■□□ 2.71
GFRA3-202ENST00000378362 XIRP1Q702N8 1843 aaKnown RBP31.97■■■□□ 2.71
GFRA3-202ENST00000378362 DIP2AQ14689 1571 aa31.96■■■□□ 2.71
GFRA3-202ENST00000378362 DCAF11Q8TEB1 546 aa31.96■■■□□ 2.71
GFRA3-202ENST00000378362 PIP4K2BP78356 416 aa31.94■■■□□ 2.7
GFRA3-202ENST00000378362 NWD1Q149M9 1564 aa31.94■■■□□ 2.7
GFRA3-202ENST00000378362 ALKQ9UM73 1620 aa31.94■■■□□ 2.7
GFRA3-202ENST00000378362 IQSEC2Q5JU85 1478 aa31.93■■■□□ 2.7
GFRA3-202ENST00000378362 SCAF1Q9H7N4 1312 aaKnown RBP31.93■■■□□ 2.7
GFRA3-202ENST00000378362 NEUROD1Q13562 356 aa31.93■■■□□ 2.7
GFRA3-202ENST00000378362 TMEM132EQ6IEE7 984 aa31.91■■■□□ 2.7
GFRA3-202ENST00000378362 PIK3R4Q99570 1358 aa31.89■■■□□ 2.69
GFRA3-202ENST00000378362 SETD1AO15047 1707 aaKnown RBP31.88■■■□□ 2.69
GFRA3-202ENST00000378362 NKTRP30414 1462 aaKnown RBP31.87■■■□□ 2.69
GFRA3-202ENST00000378362 CFAP70Q5T0N1 1121 aa31.87■■■□□ 2.69
GFRA3-202ENST00000378362 C14orf37Q86TY3 774 aa31.86■■■□□ 2.69
GFRA3-202ENST00000378362 STK26Q9P289 416 aa31.86■■■□□ 2.69
GFRA3-202ENST00000378362 PIK3C2GO75747 1445 aa31.85■■■□□ 2.69
GFRA3-202ENST00000378362 TOM1O60784 492 aa31.84■■■□□ 2.69
GFRA3-202ENST00000378362 XRN1Q8IZH2 1706 aaKnown RBP31.81■■■□□ 2.68
GFRA3-202ENST00000378362 MYOM2P54296 1465 aa31.79■■■□□ 2.68
GFRA3-202ENST00000378362 C14orf93Q9H972 538 aaKnown RBP31.79■■■□□ 2.68
GFRA3-202ENST00000378362 NRXN1Q9ULB1 1477 aa31.78■■■□□ 2.68
GFRA3-202ENST00000378362 ROBO2Q9HCK4 1378 aa31.78■■■□□ 2.68
GFRA3-202ENST00000378362 ASXL1Q8IXJ9 1541 aa31.76■■■□□ 2.68
GFRA3-202ENST00000378362 L3MBTL2Q969R5 705 aa31.75■■■□□ 2.67
GFRA3-202ENST00000378362 MSH6P52701 1360 aa31.74■■■□□ 2.67
GFRA3-202ENST00000378362 WAPLQ7Z5K2 1190 aa31.72■■■□□ 2.67
GFRA3-202ENST00000378362 C19orf44Q9H6X5 657 aa31.7■■■□□ 2.66
GFRA3-202ENST00000378362 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.67■■■□□ 2.66
GFRA3-202ENST00000378362 YTHDC2Q9H6S0 1430 aaKnown RBP31.67■■■□□ 2.66
GFRA3-202ENST00000378362 HSPA1LP34931 641 aa31.66■■■□□ 2.66
GFRA3-202ENST00000378362 LRPPRCP42704 1394 aaKnown RBP31.66■■■□□ 2.66
GFRA3-202ENST00000378362 PLEKHH1Q9ULM0 1364 aa31.65■■■□□ 2.66
GFRA3-202ENST00000378362 ATF3P18847 181 aa31.65■■■□□ 2.66
GFRA3-202ENST00000378362 SLAIN2Q9P270 581 aa31.65■■■□□ 2.66
GFRA3-202ENST00000378362 SAFB2Q14151 953 aaKnown RBP eCLIP31.64■■■□□ 2.66
GFRA3-202ENST00000378362 PTCH1Q13635 1447 aa31.64■■■□□ 2.65
GFRA3-202ENST00000378362 TRAK1Q9UPV9 953 aa31.62■■■□□ 2.65
GFRA3-202ENST00000378362 NCOA3Q9Y6Q9 1424 aa31.62■■■□□ 2.65
GFRA3-202ENST00000378362 NBPF1Q3BBV0 1214 aa31.61■■■□□ 2.65
GFRA3-202ENST00000378362 NALCNQ8IZF0 1738 aa31.61■■■□□ 2.65
GFRA3-202ENST00000378362 ABCC11Q96J66 1382 aa31.61■■■□□ 2.65
GFRA3-202ENST00000378362 STAC3Q96MF2 364 aa31.61■■■□□ 2.65
GFRA3-202ENST00000378362 CADPS2Q86UW7 1296 aa31.59■■■□□ 2.65
GFRA3-202ENST00000378362 LAMC1P11047 1609 aa31.58■■■□□ 2.65
GFRA3-202ENST00000378362 ADGRB1O14514 1584 aa31.58■■■□□ 2.65
GFRA3-202ENST00000378362 PRAG1Q86YV5 1406 aa31.58■■■□□ 2.65
GFRA3-202ENST00000378362 ADGRL3Q9HAR2 1447 aa31.58■■■□□ 2.65
GFRA3-202ENST00000378362 PRAM1Q96QH2 718 aa31.56■■■□□ 2.64
GFRA3-202ENST00000378362 TECPR2O15040 1411 aa31.55■■■□□ 2.64
GFRA3-202ENST00000378362 NUTM2FA1L443 756 aa31.54■■■□□ 2.64
GFRA3-202ENST00000378362 ROBO1Q9Y6N7 1651 aa31.54■■■□□ 2.64
GFRA3-202ENST00000378362 TONSLQ96HA7 1378 aa31.51■■■□□ 2.63
GFRA3-202ENST00000378362 KNDC1Q76NI1 1749 aa31.51■■■□□ 2.63
GFRA3-202ENST00000378362 NBPF8Q3BBV2 869 aa31.51■■■□□ 2.63
GFRA3-202ENST00000378362 POGKQ9P215 609 aa31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms