RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 LRRC7Q96NW7 1537 aa23.1■■□□□ 1.29
RAB4B-202ENST00000378307 UBAP1LF5GYI3 381 aa23.1■■□□□ 1.29
RAB4B-202ENST00000378307 CLTCL1P53675 1640 aa23.09■■□□□ 1.29
RAB4B-202ENST00000378307 SLC4A1APQ9BWU0 796 aaKnown RBP23.09■■□□□ 1.29
RAB4B-202ENST00000378307 PLEKHG1Q9ULL1 1385 aa23.07■■□□□ 1.28
RAB4B-202ENST00000378307 TRPM2O94759 1503 aa23.07■■□□□ 1.28
RAB4B-202ENST00000378307 FOXD1Q16676 465 aa23.06■■□□□ 1.28
RAB4B-202ENST00000378307 BCANQ96GW7 911 aa23.06■■□□□ 1.28
RAB4B-202ENST00000378307 PPP1R15AO75807 674 aaPredicted RBP23.05■■□□□ 1.28
RAB4B-202ENST00000378307 XIRP1Q702N8 1843 aaKnown RBP23.05■■□□□ 1.28
RAB4B-202ENST00000378307 HDGFP51858 240 aaKnown RBP23.04■■□□□ 1.28
RAB4B-202ENST00000378307 ALKQ9UM73 1620 aa23.04■■□□□ 1.28
RAB4B-202ENST00000378307 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.03■■□□□ 1.28
RAB4B-202ENST00000378307 SETD5Q9C0A6 1442 aa23.02■■□□□ 1.28
RAB4B-202ENST00000378307 KCNA6P17658 529 aa23.02■■□□□ 1.28
RAB4B-202ENST00000378307 ADAMTS13Q76LX8 1427 aa23■■□□□ 1.27
RAB4B-202ENST00000378307 MPHOSPH9Q99550 1183 aa23■■□□□ 1.27
RAB4B-202ENST00000378307 KIF1BO60333 1816 aa23■■□□□ 1.27
RAB4B-202ENST00000378307 ZNF326Q5BKZ1 582 aaKnown RBP22.99■■□□□ 1.27
RAB4B-202ENST00000378307 RBM33Q96EV2 1170 aaKnown RBP22.99■■□□□ 1.27
RAB4B-202ENST00000378307 PIP4K2BP78356 416 aa22.98■■□□□ 1.27
RAB4B-202ENST00000378307 TBX22Q9Y458 520 aa22.98■■□□□ 1.27
RAB4B-202ENST00000378307 CHD2O14647 1828 aaKnown RBP22.98■■□□□ 1.27
RAB4B-202ENST00000378307 NWD1Q149M9 1564 aa22.97■■□□□ 1.27
RAB4B-202ENST00000378307 RAB3GAP2Q9H2M9 1393 aa22.97■■□□□ 1.27
RAB4B-202ENST00000378307 TOM1O60784 492 aa22.96■■□□□ 1.27
RAB4B-202ENST00000378307 NEXMIFQ5QGS0 1516 aa22.96■■□□□ 1.27
RAB4B-202ENST00000378307 NRXN3Q9Y4C0 1643 aa22.95■■□□□ 1.26
RAB4B-202ENST00000378307 TMEM94Q12767 1356 aa22.94■■□□□ 1.26
RAB4B-202ENST00000378307 SCAF1Q9H7N4 1312 aaKnown RBP22.94■■□□□ 1.26
RAB4B-202ENST00000378307 PROSER2Q86WR7 435 aaPredicted RBP22.93■■□□□ 1.26
RAB4B-202ENST00000378307 DIP2AQ14689 1571 aa22.9■■□□□ 1.26
RAB4B-202ENST00000378307 NKTRP30414 1462 aaKnown RBP22.9■■□□□ 1.26
RAB4B-202ENST00000378307 PTPRUQ92729 1446 aa22.9■■□□□ 1.26
RAB4B-202ENST00000378307 SETBP1Q9Y6X0 1596 aa22.89■■□□□ 1.26
RAB4B-202ENST00000378307 HSPA1LP34931 641 aa22.87■■□□□ 1.25
RAB4B-202ENST00000378307 CCDC144AA2RUR9 1427 aa22.85■■□□□ 1.25
RAB4B-202ENST00000378307 METP08581 1390 aa22.85■■□□□ 1.25
RAB4B-202ENST00000378307 PIK3R4Q99570 1358 aa22.85■■□□□ 1.25
RAB4B-202ENST00000378307 PPLO60437 1756 aa22.84■■□□□ 1.25
RAB4B-202ENST00000378307 AMOTL2Q9Y2J4 779 aa22.84■■□□□ 1.25
RAB4B-202ENST00000378307 ACIN1Q9UKV3 1341 aaKnown RBP22.82■■□□□ 1.24
RAB4B-202ENST00000378307 SPATA31E1Q6ZUB1 1445 aa22.82■■□□□ 1.24
RAB4B-202ENST00000378307 RGL3Q3MIN7 710 aa22.82■■□□□ 1.24
RAB4B-202ENST00000378307 RPGRIP1LQ68CZ1 1315 aa22.82■■□□□ 1.24
RAB4B-202ENST00000378307 VGFO15240 615 aaPredicted RBP22.8■■□□□ 1.24
RAB4B-202ENST00000378307 SETD1AO15047 1707 aaKnown RBP22.79■■□□□ 1.24
RAB4B-202ENST00000378307 XRN1Q8IZH2 1706 aaKnown RBP22.79■■□□□ 1.24
RAB4B-202ENST00000378307 HRCP23327 699 aa22.78■■□□□ 1.24
RAB4B-202ENST00000378307 ADGRF5Q8IZF2 1346 aa22.77■■□□□ 1.24
RAB4B-202ENST00000378307 IFT172Q9UG01 1749 aa22.77■■□□□ 1.23
RAB4B-202ENST00000378307 MSH6P52701 1360 aa22.76■■□□□ 1.23
RAB4B-202ENST00000378307 NCOA3Q9Y6Q9 1424 aa22.74■■□□□ 1.23
RAB4B-202ENST00000378307 ANKRD30BQ9BXX2 1392 aa22.74■■□□□ 1.23
RAB4B-202ENST00000378307 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.74■■□□□ 1.23
RAB4B-202ENST00000378307 FAM135BQ49AJ0 1406 aa22.73■■□□□ 1.23
RAB4B-202ENST00000378307 C14orf37Q86TY3 774 aa22.72■■□□□ 1.23
RAB4B-202ENST00000378307 ROBO1Q9Y6N7 1651 aa22.71■■□□□ 1.23
RAB4B-202ENST00000378307 SLAIN2Q9P270 581 aa22.71■■□□□ 1.23
RAB4B-202ENST00000378307 C19orf44Q9H6X5 657 aa22.7■■□□□ 1.22
RAB4B-202ENST00000378307 DISP3Q9P2K9 1392 aa22.68■■□□□ 1.22
RAB4B-202ENST00000378307 ROBO2Q9HCK4 1378 aa22.66■■□□□ 1.22
RAB4B-202ENST00000378307 PIK3C2GO75747 1445 aa22.64■■□□□ 1.21
RAB4B-202ENST00000378307 NALCNQ8IZF0 1738 aa22.63■■□□□ 1.21
RAB4B-202ENST00000378307 ATF3P18847 181 aa22.63■■□□□ 1.21
RAB4B-202ENST00000378307 CADPS2Q86UW7 1296 aa22.63■■□□□ 1.21
RAB4B-202ENST00000378307 ASXL1Q8IXJ9 1541 aa22.62■■□□□ 1.21
RAB4B-202ENST00000378307 TMEM132EQ6IEE7 984 aa22.62■■□□□ 1.21
RAB4B-202ENST00000378307 PTCH1Q13635 1447 aa22.61■■□□□ 1.21
RAB4B-202ENST00000378307 NRXN1Q9ULB1 1477 aa22.6■■□□□ 1.21
RAB4B-202ENST00000378307 PRAG1Q86YV5 1406 aa22.6■■□□□ 1.21
RAB4B-202ENST00000378307 ADGRL3Q9HAR2 1447 aa22.6■■□□□ 1.21
RAB4B-202ENST00000378307 MED1Q15648 1581 aaPredicted RBP22.59■■□□□ 1.21
RAB4B-202ENST00000378307 DCCP43146 1447 aa22.58■■□□□ 1.21
RAB4B-202ENST00000378307 ILDR2Q71H61 639 aa22.58■■□□□ 1.21
RAB4B-202ENST00000378307 STK26Q9P289 416 aa22.58■■□□□ 1.21
RAB4B-202ENST00000378307 MYOM2P54296 1465 aa22.58■■□□□ 1.2
RAB4B-202ENST00000378307 MST1RQ04912 1400 aa22.57■■□□□ 1.2
RAB4B-202ENST00000378307 CFAP70Q5T0N1 1121 aa22.57■■□□□ 1.2
RAB4B-202ENST00000378307 C14orf93Q9H972 538 aaKnown RBP22.57■■□□□ 1.2
RAB4B-202ENST00000378307 PHLPP1O60346 1717 aa22.57■■□□□ 1.2
RAB4B-202ENST00000378307 BRINP3Q76B58 766 aa22.55■■□□□ 1.2
RAB4B-202ENST00000378307 LRPPRCP42704 1394 aaKnown RBP22.54■■□□□ 1.2
RAB4B-202ENST00000378307 DHX57Q6P158 1386 aaKnown RBP22.54■■□□□ 1.2
RAB4B-202ENST00000378307 WAPLQ7Z5K2 1190 aa22.54■■□□□ 1.2
RAB4B-202ENST00000378307 KDM2AQ9Y2K7 1162 aa22.54■■□□□ 1.2
RAB4B-202ENST00000378307 DCAF11Q8TEB1 546 aa22.53■■□□□ 1.2
RAB4B-202ENST00000378307 TECPR2O15040 1411 aa22.53■■□□□ 1.2
RAB4B-202ENST00000378307 ABCC11Q96J66 1382 aa22.52■■□□□ 1.2
RAB4B-202ENST00000378307 PLEKHH1Q9ULM0 1364 aa22.52■■□□□ 1.2
RAB4B-202ENST00000378307 COL16A1Q07092 1604 aaPredicted RBP22.52■■□□□ 1.2
RAB4B-202ENST00000378307 YTHDC2Q9H6S0 1430 aaKnown RBP22.51■■□□□ 1.19
RAB4B-202ENST00000378307 KNDC1Q76NI1 1749 aa22.51■■□□□ 1.19
RAB4B-202ENST00000378307 AHDC1Q5TGY3 1603 aaPredicted RBP22.49■■□□□ 1.19
RAB4B-202ENST00000378307 LAMC1P11047 1609 aa22.48■■□□□ 1.19
RAB4B-202ENST00000378307 C1orf167Q5SNV9 1468 aa22.47■■□□□ 1.19
RAB4B-202ENST00000378307 DDX17Q92841 729 aaKnown RBP22.47■■□□□ 1.19
RAB4B-202ENST00000378307 ORAI2Q96SN7 254 aa22.45■■□□□ 1.18
RAB4B-202ENST00000378307 ADGRB1O14514 1584 aa22.45■■□□□ 1.18
RAB4B-202ENST00000378307 NHSL1Q5SYE7 1610 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms