RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 TRIM26Q12899 539 aaPredicted RBP30.4■■■□□ 2.46
TRIM13-203ENST00000378183 ZNF335Q9H4Z2 1342 aaPredicted RBP30.4■■■□□ 2.46
TRIM13-203ENST00000378183 NUTM2DQ5VT03 806 aaPredicted RBP30.34■■■□□ 2.45
TRIM13-203ENST00000378183 HDGFP51858 240 aaKnown RBP30.33■■■□□ 2.45
TRIM13-203ENST00000378183 CCDC144AA2RUR9 1427 aa30.32■■■□□ 2.44
TRIM13-203ENST00000378183 ZNF326Q5BKZ1 582 aaKnown RBP30.32■■■□□ 2.44
TRIM13-203ENST00000378183 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.32■■■□□ 2.44
TRIM13-203ENST00000378183 CERKQ8TCT0 537 aa30.32■■■□□ 2.44
TRIM13-203ENST00000378183 STRCP1A6NGW2 1772 aa30.31■■■□□ 2.44
TRIM13-203ENST00000378183 PLEKHG1Q9ULL1 1385 aa30.31■■■□□ 2.44
TRIM13-203ENST00000378183 NEXMIFQ5QGS0 1516 aa30.31■■■□□ 2.44
TRIM13-203ENST00000378183 PPP1R15AO75807 674 aaPredicted RBP30.29■■■□□ 2.44
TRIM13-203ENST00000378183 SENP3Q9H4L4 574 aaPredicted RBP30.29■■■□□ 2.44
TRIM13-203ENST00000378183 SLC26A8Q96RN1 970 aa30.27■■■□□ 2.44
TRIM13-203ENST00000378183 ANKRD30BQ9BXX2 1392 aa30.27■■■□□ 2.44
TRIM13-203ENST00000378183 SPATA31E1Q6ZUB1 1445 aa30.25■■■□□ 2.43
TRIM13-203ENST00000378183 PPLO60437 1756 aa30.24■■■□□ 2.43
TRIM13-203ENST00000378183 BCANQ96GW7 911 aa30.23■■■□□ 2.43
TRIM13-203ENST00000378183 NRXN3Q9Y4C0 1643 aa30.22■■■□□ 2.43
TRIM13-203ENST00000378183 ADAMTS13Q76LX8 1427 aa30.22■■■□□ 2.43
TRIM13-203ENST00000378183 CPS1P31327 1500 aa30.21■■■□□ 2.43
TRIM13-203ENST00000378183 RPGRIP1LQ68CZ1 1315 aa30.19■■■□□ 2.42
TRIM13-203ENST00000378183 SETBP1Q9Y6X0 1596 aa30.18■■■□□ 2.42
TRIM13-203ENST00000378183 IFT172Q9UG01 1749 aa30.18■■■□□ 2.42
TRIM13-203ENST00000378183 RGL3Q3MIN7 710 aa30.17■■■□□ 2.42
TRIM13-203ENST00000378183 TBX22Q9Y458 520 aa30.16■■■□□ 2.42
TRIM13-203ENST00000378183 DIP2AQ14689 1571 aa30.15■■■□□ 2.42
TRIM13-203ENST00000378183 CHD2O14647 1828 aaKnown RBP30.15■■■□□ 2.42
TRIM13-203ENST00000378183 IQSEC2Q5JU85 1478 aa30.15■■■□□ 2.42
TRIM13-203ENST00000378183 NWD1Q149M9 1564 aa30.12■■■□□ 2.41
TRIM13-203ENST00000378183 VGFO15240 615 aaPredicted RBP30.12■■■□□ 2.41
TRIM13-203ENST00000378183 KCNA6P17658 529 aa30.12■■■□□ 2.41
TRIM13-203ENST00000378183 LRRC7Q96NW7 1537 aa30.12■■■□□ 2.41
TRIM13-203ENST00000378183 XIRP1Q702N8 1843 aaKnown RBP30.08■■■□□ 2.41
TRIM13-203ENST00000378183 FBXO41Q8TF61 875 aa30.08■■■□□ 2.41
TRIM13-203ENST00000378183 SETD1AO15047 1707 aaKnown RBP30.07■■■□□ 2.4
TRIM13-203ENST00000378183 ADGRF5Q8IZF2 1346 aa30.06■■■□□ 2.4
TRIM13-203ENST00000378183 ILDR1Q86SU0 546 aaPredicted RBP30.06■■■□□ 2.4
TRIM13-203ENST00000378183 PIK3R4Q99570 1358 aa30.05■■■□□ 2.4
TRIM13-203ENST00000378183 DHX57Q6P158 1386 aaKnown RBP30.04■■■□□ 2.4
TRIM13-203ENST00000378183 PTPRUQ92729 1446 aa30.04■■■□□ 2.4
TRIM13-203ENST00000378183 ALKQ9UM73 1620 aa30.03■■■□□ 2.4
TRIM13-203ENST00000378183 METP08581 1390 aa30.03■■■□□ 2.4
TRIM13-203ENST00000378183 NKTRP30414 1462 aaKnown RBP30.01■■■□□ 2.4
TRIM13-203ENST00000378183 XRN1Q8IZH2 1706 aaKnown RBP29.97■■■□□ 2.39
TRIM13-203ENST00000378183 MYOM2P54296 1465 aa29.97■■■□□ 2.39
TRIM13-203ENST00000378183 NRXN1Q9ULB1 1477 aa29.96■■■□□ 2.39
TRIM13-203ENST00000378183 PROSER2Q86WR7 435 aaPredicted RBP29.96■■■□□ 2.39
TRIM13-203ENST00000378183 RBM33Q96EV2 1170 aaKnown RBP29.96■■■□□ 2.39
TRIM13-203ENST00000378183 PCGF6Q9BYE7 350 aa29.96■■■□□ 2.39
TRIM13-203ENST00000378183 AMOTL2Q9Y2J4 779 aa29.96■■■□□ 2.39
TRIM13-203ENST00000378183 PIK3C2GO75747 1445 aa29.96■■■□□ 2.39
TRIM13-203ENST00000378183 TMEM94Q12767 1356 aa29.95■■■□□ 2.39
TRIM13-203ENST00000378183 UBAP1LF5GYI3 381 aa29.91■■■□□ 2.38
TRIM13-203ENST00000378183 SIN3AQ96ST3 1273 aa29.91■■■□□ 2.38
TRIM13-203ENST00000378183 DCAF11Q8TEB1 546 aa29.9■■■□□ 2.38
TRIM13-203ENST00000378183 ASXL1Q8IXJ9 1541 aa29.87■■■□□ 2.37
TRIM13-203ENST00000378183 KDM2AQ9Y2K7 1162 aa29.87■■■□□ 2.37
TRIM13-203ENST00000378183 C14orf93Q9H972 538 aaKnown RBP29.85■■■□□ 2.37
TRIM13-203ENST00000378183 LAMC1P11047 1609 aa29.83■■■□□ 2.37
TRIM13-203ENST00000378183 TOM1O60784 492 aa29.83■■■□□ 2.37
TRIM13-203ENST00000378183 NCOA3Q9Y6Q9 1424 aa29.82■■■□□ 2.36
TRIM13-203ENST00000378183 CFAP70Q5T0N1 1121 aa29.82■■■□□ 2.36
TRIM13-203ENST00000378183 STAC3Q96MF2 364 aa29.82■■■□□ 2.36
TRIM13-203ENST00000378183 TMEM132EQ6IEE7 984 aa29.81■■■□□ 2.36
TRIM13-203ENST00000378183 PRAG1Q86YV5 1406 aa29.8■■■□□ 2.36
TRIM13-203ENST00000378183 NEUROD1Q13562 356 aa29.8■■■□□ 2.36
TRIM13-203ENST00000378183 ROBO2Q9HCK4 1378 aa29.78■■■□□ 2.36
TRIM13-203ENST00000378183 PTCH1Q13635 1447 aa29.78■■■□□ 2.36
TRIM13-203ENST00000378183 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.77■■■□□ 2.36
TRIM13-203ENST00000378183 MSH6P52701 1360 aa29.77■■■□□ 2.36
TRIM13-203ENST00000378183 KNDC1Q76NI1 1749 aa29.76■■■□□ 2.35
TRIM13-203ENST00000378183 LRPPRCP42704 1394 aaKnown RBP29.76■■■□□ 2.35
TRIM13-203ENST00000378183 PIP4K2BP78356 416 aa29.75■■■□□ 2.35
TRIM13-203ENST00000378183 L3MBTL2Q969R5 705 aa29.75■■■□□ 2.35
TRIM13-203ENST00000378183 TECPR2O15040 1411 aa29.73■■■□□ 2.35
TRIM13-203ENST00000378183 YTHDC2Q9H6S0 1430 aaKnown RBP29.73■■■□□ 2.35
TRIM13-203ENST00000378183 STK26Q9P289 416 aa29.73■■■□□ 2.35
TRIM13-203ENST00000378183 NALCNQ8IZF0 1738 aa29.73■■■□□ 2.35
TRIM13-203ENST00000378183 ADGRB1O14514 1584 aa29.73■■■□□ 2.35
TRIM13-203ENST00000378183 C14orf37Q86TY3 774 aa29.72■■■□□ 2.35
TRIM13-203ENST00000378183 ABCC11Q96J66 1382 aa29.72■■■□□ 2.35
TRIM13-203ENST00000378183 C19orf44Q9H6X5 657 aa29.71■■■□□ 2.35
TRIM13-203ENST00000378183 SCAF1Q9H7N4 1312 aaKnown RBP29.7■■■□□ 2.34
TRIM13-203ENST00000378183 KIAA1210Q9ULL0 1709 aa29.68■■■□□ 2.34
TRIM13-203ENST00000378183 ADGRL3Q9HAR2 1447 aa29.67■■■□□ 2.34
TRIM13-203ENST00000378183 WAPLQ7Z5K2 1190 aa29.64■■■□□ 2.34
TRIM13-203ENST00000378183 PLEKHH1Q9ULM0 1364 aa29.64■■■□□ 2.33
TRIM13-203ENST00000378183 DCCP43146 1447 aa29.63■■■□□ 2.33
TRIM13-203ENST00000378183 SLAIN2Q9P270 581 aa29.63■■■□□ 2.33
TRIM13-203ENST00000378183 ATF3P18847 181 aa29.62■■■□□ 2.33
TRIM13-203ENST00000378183 CADPS2Q86UW7 1296 aa29.62■■■□□ 2.33
TRIM13-203ENST00000378183 SIRT1Q96EB6 747 aa29.62■■■□□ 2.33
TRIM13-203ENST00000378183 ROBO1Q9Y6N7 1651 aa29.61■■■□□ 2.33
TRIM13-203ENST00000378183 FAM135BQ49AJ0 1406 aa29.61■■■□□ 2.33
TRIM13-203ENST00000378183 DLC1Q96QB1 1528 aa29.6■■■□□ 2.33
TRIM13-203ENST00000378183 HSPA1LP34931 641 aa29.57■■■□□ 2.32
TRIM13-203ENST00000378183 NBPF1Q3BBV0 1214 aa29.57■■■□□ 2.32
TRIM13-203ENST00000378183 MST1RQ04912 1400 aa29.56■■■□□ 2.32
TRIM13-203ENST00000378183 TRAK1Q9UPV9 953 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms