RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 GPATCH3Q96I76 525 aa13.52□□□□□ -0.24
HIF3A-205ENST00000377670 NBPF8Q3BBV2 869 aa13.52□□□□□ -0.25
HIF3A-205ENST00000377670 ANKLE2Q86XL3 938 aa13.52□□□□□ -0.25
HIF3A-205ENST00000377670 NGEFQ8N5V2 710 aa13.52□□□□□ -0.25
HIF3A-205ENST00000377670 ABCA10Q8WWZ4 1543 aa13.52□□□□□ -0.25
HIF3A-205ENST00000377670 EVC2Q86UK5 1308 aa13.52□□□□□ -0.25
HIF3A-205ENST00000377670 TIAM1Q13009 1591 aa13.52□□□□□ -0.25
HIF3A-205ENST00000377670 CFAP70Q5T0N1 1121 aa13.51□□□□□ -0.25
HIF3A-205ENST00000377670 RBM33Q96EV2 1170 aaKnown RBP13.51□□□□□ -0.25
HIF3A-205ENST00000377670 ESCO1Q5FWF5 840 aa13.51□□□□□ -0.25
HIF3A-205ENST00000377670 TOMM22Q9NS69 142 aa13.51□□□□□ -0.25
HIF3A-205ENST00000377670 MYBBP1AQ9BQG0 1328 aaKnown RBP13.51□□□□□ -0.25
HIF3A-205ENST00000377670 STRN4Q9NRL3 753 aa13.51□□□□□ -0.25
HIF3A-205ENST00000377670 GPRASP1Q5JY77 1395 aa13.51□□□□□ -0.25
HIF3A-205ENST00000377670 ITPRIPQ8IWB1 547 aa13.51□□□□□ -0.25
HIF3A-205ENST00000377670 SLKQ9H2G2 1235 aaPredicted RBP13.5□□□□□ -0.25
HIF3A-205ENST00000377670 SLC4A10Q6U841 1118 aa13.5□□□□□ -0.25
HIF3A-205ENST00000377670 PLB1Q6P1J6 1458 aa13.5□□□□□ -0.25
HIF3A-205ENST00000377670 IPO9Q96P70 1041 aaKnown RBP13.49□□□□□ -0.25
HIF3A-205ENST00000377670 SCAPERQ9BY12 1400 aa13.49□□□□□ -0.25
HIF3A-205ENST00000377670 AMOTL1Q8IY63 956 aa13.49□□□□□ -0.25
HIF3A-205ENST00000377670 RAD21O60216 631 aa13.49□□□□□ -0.25
HIF3A-205ENST00000377670 DRC7Q8IY82 874 aa13.49□□□□□ -0.25
HIF3A-205ENST00000377670 DMRT2Q9Y5R5 561 aa13.49□□□□□ -0.25
HIF3A-205ENST00000377670 VPS37DQ86XT2 251 aa13.49□□□□□ -0.25
HIF3A-205ENST00000377670 CABP2Q9NPB3 220 aa13.48□□□□□ -0.25
HIF3A-205ENST00000377670 EFCAB5A4FU69 1503 aa13.48□□□□□ -0.25
HIF3A-205ENST00000377670 NRDCO43847 1150 aa13.48□□□□□ -0.25
HIF3A-205ENST00000377670 PCF11O94913 1555 aaKnown RBP13.48□□□□□ -0.25
HIF3A-205ENST00000377670 GOLGA6L4A6NEF3 574 aa13.47□□□□□ -0.25
HIF3A-205ENST00000377670 PRM3Q9NNZ6 103 aa13.47□□□□□ -0.25
HIF3A-205ENST00000377670 SMC4Q9NTJ3 1288 aa13.47□□□□□ -0.25
HIF3A-205ENST00000377670 APAF1O14727 1248 aa13.47□□□□□ -0.25
HIF3A-205ENST00000377670 CCDC7Q96M83 1385 aa13.47□□□□□ -0.25
HIF3A-205ENST00000377670 TROQ12816 1431 aaPredicted RBP13.47□□□□□ -0.25
HIF3A-205ENST00000377670 C9orf84Q5VXU9 1444 aa13.47□□□□□ -0.25
HIF3A-205ENST00000377670 PEG3Q9GZU2 1588 aa13.46□□□□□ -0.25
HIF3A-205ENST00000377670 LAMC3Q9Y6N6 1575 aa13.46□□□□□ -0.25
HIF3A-205ENST00000377670 MARCH6O60337 910 aa13.46□□□□□ -0.25
HIF3A-205ENST00000377670 PDE3BQ13370 1112 aa13.46□□□□□ -0.25
HIF3A-205ENST00000377670 EPRSP07814 1512 aaKnown RBP13.46□□□□□ -0.25
HIF3A-205ENST00000377670 NEXNQ0ZGT2 675 aa13.46□□□□□ -0.26
HIF3A-205ENST00000377670 TCERG1O14776 1098 aaKnown RBP13.45□□□□□ -0.26
HIF3A-205ENST00000377670 TCEAL9Q9UHQ7 104 aa13.45□□□□□ -0.26
HIF3A-205ENST00000377670 GOLGA6L3A6NEY3 463 aa13.45□□□□□ -0.26
HIF3A-205ENST00000377670 ARHGEF11O15085 1522 aa13.45□□□□□ -0.26
HIF3A-205ENST00000377670 NUTM2GQ5VZR2 741 aa13.45□□□□□ -0.26
HIF3A-205ENST00000377670 GGNBP2Q9H3C7 697 aa13.44□□□□□ -0.26
HIF3A-205ENST00000377670 EHBP1L1Q8N3D4 1523 aa13.44□□□□□ -0.26
HIF3A-205ENST00000377670 HMGB2P26583 209 aaKnown RBP13.44□□□□□ -0.26
HIF3A-205ENST00000377670 GBP4Q96PP9 640 aa13.44□□□□□ -0.26
HIF3A-205ENST00000377670 KIAA0586Q9BVV6 1533 aa13.44□□□□□ -0.26
HIF3A-205ENST00000377670 CFAP44Q96MT7 982 aa13.43□□□□□ -0.26
HIF3A-205ENST00000377670 CCAR1Q8IX12 1150 aaKnown RBP13.43□□□□□ -0.26
HIF3A-205ENST00000377670 CENPJQ9HC77 1338 aaPredicted RBP13.43□□□□□ -0.26
HIF3A-205ENST00000377670 CNKSR2Q8WXI2 1034 aa13.43□□□□□ -0.26
HIF3A-205ENST00000377670 IQGAP2Q13576 1575 aa13.42□□□□□ -0.26
HIF3A-205ENST00000377670 CGNL1Q0VF96 1302 aa13.42□□□□□ -0.26
HIF3A-205ENST00000377670 HMMRO75330 724 aa13.42□□□□□ -0.26
HIF3A-205ENST00000377670 DAPK1P53355 1430 aa13.42□□□□□ -0.26
HIF3A-205ENST00000377670 KIAA2012Q0VF49 1180 aa13.42□□□□□ -0.26
HIF3A-205ENST00000377670 HECW1Q76N89 1606 aa13.41□□□□□ -0.26
HIF3A-205ENST00000377670 EIF2S2P20042 333 aaKnown RBP13.41□□□□□ -0.26
HIF3A-205ENST00000377670 NLRP6P59044 892 aa13.41□□□□□ -0.26
HIF3A-205ENST00000377670 EXOC6Q8TAG9 804 aa13.41□□□□□ -0.26
HIF3A-205ENST00000377670 HSP90AA2PQ14568 343 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-205ENST00000377670 HFM1A2PYH4 1435 aa13.4□□□□□ -0.26
HIF3A-205ENST00000377670 RASSF8Q8NHQ8 419 aa13.4□□□□□ -0.26
HIF3A-205ENST00000377670 CCDC184Q52MB2 194 aa13.39□□□□□ -0.27
HIF3A-205ENST00000377670 PTMSP20962 102 aa13.39□□□□□ -0.27
HIF3A-205ENST00000377670 HMOX1P09601 288 aa13.39□□□□□ -0.27
HIF3A-205ENST00000377670 ABTB2Q8N961 1025 aa13.39□□□□□ -0.27
HIF3A-205ENST00000377670 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
HIF3A-205ENST00000377670 GRIN2AQ12879 1464 aa13.38□□□□□ -0.27
HIF3A-205ENST00000377670 NAIPQ13075 1403 aa13.38□□□□□ -0.27
HIF3A-205ENST00000377670 NECTIN2Q92692 538 aa13.38□□□□□ -0.27
HIF3A-205ENST00000377670 TNNT3P45378 269 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-205ENST00000377670 TOM1L2Q6ZVM7 507 aa13.38□□□□□ -0.27
HIF3A-205ENST00000377670 VSIG10Q8N0Z9 540 aa13.38□□□□□ -0.27
HIF3A-205ENST00000377670 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-205ENST00000377670 MIA2Q96PC5 1412 aa13.37□□□□□ -0.27
HIF3A-205ENST00000377670 DDX58O95786 925 aaKnown RBP13.37□□□□□ -0.27
HIF3A-205ENST00000377670 RSPH6AQ9H0K4 717 aa13.37□□□□□ -0.27
HIF3A-205ENST00000377670 WDR97A6NE52 1622 aa13.37□□□□□ -0.27
HIF3A-205ENST00000377670 SUPT6HQ7KZ85 1726 aaKnown RBP13.37□□□□□ -0.27
HIF3A-205ENST00000377670 HSP90B1P14625 803 aaKnown RBP13.37□□□□□ -0.27
HIF3A-205ENST00000377670 SLC12A5Q9H2X9 1139 aa13.36□□□□□ -0.27
HIF3A-205ENST00000377670 KIAA1107Q9UPP5 1409 aa13.36□□□□□ -0.27
HIF3A-205ENST00000377670 CRBNQ96SW2 442 aa13.36□□□□□ -0.27
HIF3A-205ENST00000377670 COG6Q9Y2V7 657 aa13.36□□□□□ -0.27
HIF3A-205ENST00000377670 TRIM6-TRIM34B2RNG4 842 aa13.36□□□□□ -0.27
HIF3A-205ENST00000377670 ADAMTS8Q9UP79 889 aa13.35□□□□□ -0.27
HIF3A-205ENST00000377670 ZBED9Q6R2W3 1325 aa13.35□□□□□ -0.27
HIF3A-205ENST00000377670 PRDM11Q9NQV5 511 aa13.35□□□□□ -0.27
HIF3A-205ENST00000377670 CNTLNQ9NXG0 1405 aa13.35□□□□□ -0.27
HIF3A-205ENST00000377670 CDCA7LQ96GN5 454 aa13.35□□□□□ -0.27
HIF3A-205ENST00000377670 PRAM1Q96QH2 718 aa13.35□□□□□ -0.27
HIF3A-205ENST00000377670 MFAP1P55081 439 aaKnown RBP13.34□□□□□ -0.27
HIF3A-205ENST00000377670 C9orf78Q9NZ63 289 aaPredicted RBP13.34□□□□□ -0.27
HIF3A-205ENST00000377670 BIVM-ERCC5R4GMW8 1640 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms