RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 RIMS2Q9UQ26 1411 aa27.27■■□□□ 1.96
COMMD6-202ENST00000377612 KIF1BO60333 1816 aa27.25■■□□□ 1.95
COMMD6-202ENST00000377612 NRXN3Q9Y4C0 1643 aa27.24■■□□□ 1.95
COMMD6-202ENST00000377612 TRPM2O94759 1503 aa27.22■■□□□ 1.95
COMMD6-202ENST00000377612 HFM1A2PYH4 1435 aa27.22■■□□□ 1.95
COMMD6-202ENST00000377612 PLEKHG1Q9ULL1 1385 aa27.22■■□□□ 1.95
COMMD6-202ENST00000377612 PIP4K2BP78356 416 aa27.21■■□□□ 1.95
COMMD6-202ENST00000377612 NKTRP30414 1462 aaKnown RBP27.2■■□□□ 1.95
COMMD6-202ENST00000377612 SLC26A8Q96RN1 970 aa27.2■■□□□ 1.94
COMMD6-202ENST00000377612 DIP2AQ14689 1571 aa27.19■■□□□ 1.94
COMMD6-202ENST00000377612 TOM1O60784 492 aa27.19■■□□□ 1.94
COMMD6-202ENST00000377612 SCAF1Q9H7N4 1312 aaKnown RBP27.17■■□□□ 1.94
COMMD6-202ENST00000377612 ADAMTS13Q76LX8 1427 aa27.16■■□□□ 1.94
COMMD6-202ENST00000377612 SENP3Q9H4L4 574 aaPredicted RBP27.16■■□□□ 1.94
COMMD6-202ENST00000377612 DISP3Q9P2K9 1392 aa27.16■■□□□ 1.94
COMMD6-202ENST00000377612 MED1Q15648 1581 aaPredicted RBP27.15■■□□□ 1.94
COMMD6-202ENST00000377612 HSPA1LP34931 641 aa27.15■■□□□ 1.94
COMMD6-202ENST00000377612 TMEM94Q12767 1356 aa27.13■■□□□ 1.93
COMMD6-202ENST00000377612 NEXMIFQ5QGS0 1516 aa27.13■■□□□ 1.93
COMMD6-202ENST00000377612 CHGAP10645 457 aaKnown RBP27.13■■□□□ 1.93
COMMD6-202ENST00000377612 ROBO1Q9Y6N7 1651 aa27.12■■□□□ 1.93
COMMD6-202ENST00000377612 XRN1Q8IZH2 1706 aaKnown RBP27.11■■□□□ 1.93
COMMD6-202ENST00000377612 SETBP1Q9Y6X0 1596 aa27.11■■□□□ 1.93
COMMD6-202ENST00000377612 KCNA6P17658 529 aa27.11■■□□□ 1.93
COMMD6-202ENST00000377612 SETD1AO15047 1707 aaKnown RBP27.1■■□□□ 1.93
COMMD6-202ENST00000377612 NUTM2DQ5VT03 806 aaPredicted RBP27.1■■□□□ 1.93
COMMD6-202ENST00000377612 PPLO60437 1756 aa27.08■■□□□ 1.93
COMMD6-202ENST00000377612 PPP1R15AO75807 674 aaPredicted RBP27.08■■□□□ 1.93
COMMD6-202ENST00000377612 RBM33Q96EV2 1170 aaKnown RBP27.06■■□□□ 1.92
COMMD6-202ENST00000377612 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.04■■□□□ 1.92
COMMD6-202ENST00000377612 ILDR2Q71H61 639 aa27.04■■□□□ 1.92
COMMD6-202ENST00000377612 BCANQ96GW7 911 aa27.03■■□□□ 1.92
COMMD6-202ENST00000377612 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.02■■□□□ 1.92
COMMD6-202ENST00000377612 PTPRUQ92729 1446 aa27.01■■□□□ 1.91
COMMD6-202ENST00000377612 IFT172Q9UG01 1749 aa27.01■■□□□ 1.91
COMMD6-202ENST00000377612 PROSER2Q86WR7 435 aaPredicted RBP26.99■■□□□ 1.91
COMMD6-202ENST00000377612 TBX22Q9Y458 520 aa26.99■■□□□ 1.91
COMMD6-202ENST00000377612 HDGFP51858 240 aaKnown RBP26.98■■□□□ 1.91
COMMD6-202ENST00000377612 PIK3R4Q99570 1358 aa26.97■■□□□ 1.91
COMMD6-202ENST00000377612 PHLPP1O60346 1717 aa26.96■■□□□ 1.91
COMMD6-202ENST00000377612 TRIM52Q96A61 297 aa26.95■■□□□ 1.9
COMMD6-202ENST00000377612 FAM135BQ49AJ0 1406 aa26.95■■□□□ 1.9
COMMD6-202ENST00000377612 NALCNQ8IZF0 1738 aa26.95■■□□□ 1.9
COMMD6-202ENST00000377612 MSH6P52701 1360 aa26.92■■□□□ 1.9
COMMD6-202ENST00000377612 ZNF326Q5BKZ1 582 aaKnown RBP26.89■■□□□ 1.9
COMMD6-202ENST00000377612 SLC4A1APQ9BWU0 796 aaKnown RBP26.89■■□□□ 1.9
COMMD6-202ENST00000377612 COL16A1Q07092 1604 aaPredicted RBP26.89■■□□□ 1.9
COMMD6-202ENST00000377612 METP08581 1390 aa26.88■■□□□ 1.89
COMMD6-202ENST00000377612 NCOA3Q9Y6Q9 1424 aa26.88■■□□□ 1.89
COMMD6-202ENST00000377612 FOXD1Q16676 465 aa26.86■■□□□ 1.89
COMMD6-202ENST00000377612 AMOTL2Q9Y2J4 779 aa26.82■■□□□ 1.88
COMMD6-202ENST00000377612 AHDC1Q5TGY3 1603 aaPredicted RBP26.81■■□□□ 1.88
COMMD6-202ENST00000377612 SPATA31E1Q6ZUB1 1445 aa26.8■■□□□ 1.88
COMMD6-202ENST00000377612 NHSL1Q5SYE7 1610 aa26.79■■□□□ 1.88
COMMD6-202ENST00000377612 SETD5Q9C0A6 1442 aa26.78■■□□□ 1.88
COMMD6-202ENST00000377612 CCDC144AA2RUR9 1427 aa26.76■■□□□ 1.87
COMMD6-202ENST00000377612 DCCP43146 1447 aa26.76■■□□□ 1.87
COMMD6-202ENST00000377612 SLAIN2Q9P270 581 aa26.76■■□□□ 1.87
COMMD6-202ENST00000377612 SHPRHQ149N8 1683 aa26.76■■□□□ 1.87
COMMD6-202ENST00000377612 ASXL1Q8IXJ9 1541 aa26.75■■□□□ 1.87
COMMD6-202ENST00000377612 MPHOSPH9Q99550 1183 aa26.75■■□□□ 1.87
COMMD6-202ENST00000377612 KNDC1Q76NI1 1749 aa26.75■■□□□ 1.87
COMMD6-202ENST00000377612 PRAG1Q86YV5 1406 aa26.74■■□□□ 1.87
COMMD6-202ENST00000377612 ADGRL3Q9HAR2 1447 aa26.73■■□□□ 1.87
COMMD6-202ENST00000377612 PTCH1Q13635 1447 aa26.73■■□□□ 1.87
COMMD6-202ENST00000377612 RAB3GAP2Q9H2M9 1393 aa26.72■■□□□ 1.87
COMMD6-202ENST00000377612 C14orf37Q86TY3 774 aa26.72■■□□□ 1.87
COMMD6-202ENST00000377612 MST1RQ04912 1400 aa26.72■■□□□ 1.87
COMMD6-202ENST00000377612 SOCS7O14512 581 aa26.71■■□□□ 1.87
COMMD6-202ENST00000377612 C19orf44Q9H6X5 657 aa26.7■■□□□ 1.86
COMMD6-202ENST00000377612 RPGRIP1LQ68CZ1 1315 aa26.69■■□□□ 1.86
COMMD6-202ENST00000377612 CADPS2Q86UW7 1296 aa26.67■■□□□ 1.86
COMMD6-202ENST00000377612 ROBO2Q9HCK4 1378 aa26.67■■□□□ 1.86
COMMD6-202ENST00000377612 LAMC1P11047 1609 aa26.65■■□□□ 1.86
COMMD6-202ENST00000377612 VGFO15240 615 aaPredicted RBP26.65■■□□□ 1.86
COMMD6-202ENST00000377612 ADGRF5Q8IZF2 1346 aa26.65■■□□□ 1.86
COMMD6-202ENST00000377612 ATF3P18847 181 aa26.64■■□□□ 1.86
COMMD6-202ENST00000377612 LRP6O75581 1613 aa26.64■■□□□ 1.85
COMMD6-202ENST00000377612 PHF23Q9BUL5 403 aaPredicted RBP26.63■■□□□ 1.85
COMMD6-202ENST00000377612 PIK3C2GO75747 1445 aa26.63■■□□□ 1.85
COMMD6-202ENST00000377612 RGS17Q9UGC6 210 aaPredicted RBP26.62■■□□□ 1.85
COMMD6-202ENST00000377612 BRINP3Q76B58 766 aa26.61■■□□□ 1.85
COMMD6-202ENST00000377612 CDC42BPGQ6DT37 1551 aa26.61■■□□□ 1.85
COMMD6-202ENST00000377612 JCADQ9P266 1359 aa26.6■■□□□ 1.85
COMMD6-202ENST00000377612 NRXN1Q9ULB1 1477 aa26.59■■□□□ 1.85
COMMD6-202ENST00000377612 MYOM2P54296 1465 aa26.58■■□□□ 1.85
COMMD6-202ENST00000377612 RGL3Q3MIN7 710 aa26.58■■□□□ 1.85
COMMD6-202ENST00000377612 ANKRD30BQ9BXX2 1392 aa26.58■■□□□ 1.84
COMMD6-202ENST00000377612 TECPR2O15040 1411 aa26.56■■□□□ 1.84
COMMD6-202ENST00000377612 C1orf167Q5SNV9 1468 aa26.55■■□□□ 1.84
COMMD6-202ENST00000377612 FMN2Q9NZ56 1722 aa26.55■■□□□ 1.84
COMMD6-202ENST00000377612 RGPD8O14715 1765 aaPredicted RBP26.54■■□□□ 1.84
COMMD6-202ENST00000377612 ACIN1Q9UKV3 1341 aaKnown RBP26.52■■□□□ 1.84
COMMD6-202ENST00000377612 LRPPRCP42704 1394 aaKnown RBP26.49■■□□□ 1.83
COMMD6-202ENST00000377612 DDX17Q92841 729 aaKnown RBP26.47■■□□□ 1.83
COMMD6-202ENST00000377612 YTHDC2Q9H6S0 1430 aaKnown RBP26.47■■□□□ 1.83
COMMD6-202ENST00000377612 PLEKHH1Q9ULM0 1364 aa26.46■■□□□ 1.83
COMMD6-202ENST00000377612 ADGRB1O14514 1584 aa26.45■■□□□ 1.82
COMMD6-202ENST00000377612 TMEM132EQ6IEE7 984 aa26.44■■□□□ 1.82
COMMD6-202ENST00000377612 POTEAQ6S8J7 498 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms