RNA–Protein interactions for RNA: ENST00000376836.7

COMMD3-201, Transcript of COMM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-201ENST00000376836 IQGAP1P46940 1657 aa40.06■■■■■ 4
COMMD3-201ENST00000376836 BCANQ96GW7 911 aa40.05■■■■■ 4
COMMD3-201ENST00000376836 CLTCL1P53675 1640 aa40.02■■■■■ 4
COMMD3-201ENST00000376836 TRIM26Q12899 539 aaPredicted RBP40.02■■■■■ 4
COMMD3-201ENST00000376836 ZNF335Q9H4Z2 1342 aaPredicted RBP40.02■■■■■ 4
COMMD3-201ENST00000376836 CERKQ8TCT0 537 aa40.01■■■■■ 4
COMMD3-201ENST00000376836 MYO5BQ9ULV0 1848 aa40.01■■■■□ 3.99
COMMD3-201ENST00000376836 ZFYVE9O95405 1425 aa39.99■■■■□ 3.99
COMMD3-201ENST00000376836 CCDC144AA2RUR9 1427 aa39.98■■■■□ 3.99
COMMD3-201ENST00000376836 NUTM2DQ5VT03 806 aaPredicted RBP39.93■■■■□ 3.98
COMMD3-201ENST00000376836 KIF1BO60333 1816 aa39.93■■■■□ 3.98
COMMD3-201ENST00000376836 PLEKHG1Q9ULL1 1385 aa39.91■■■■□ 3.98
COMMD3-201ENST00000376836 LTBP4Q8N2S1 1624 aa39.9■■■■□ 3.98
COMMD3-201ENST00000376836 SLC26A8Q96RN1 970 aa39.88■■■■□ 3.97
COMMD3-201ENST00000376836 SENP3Q9H4L4 574 aaPredicted RBP39.87■■■■□ 3.97
COMMD3-201ENST00000376836 RPGRIP1LQ68CZ1 1315 aa39.83■■■■□ 3.97
COMMD3-201ENST00000376836 CPS1P31327 1500 aa39.81■■■■□ 3.96
COMMD3-201ENST00000376836 VGFO15240 615 aaPredicted RBP39.78■■■■□ 3.96
COMMD3-201ENST00000376836 RGL3Q3MIN7 710 aa39.76■■■■□ 3.96
COMMD3-201ENST00000376836 TBX22Q9Y458 520 aa39.76■■■■□ 3.96
COMMD3-201ENST00000376836 NEXMIFQ5QGS0 1516 aa39.74■■■■□ 3.95
COMMD3-201ENST00000376836 ANKRD30BQ9BXX2 1392 aa39.74■■■■□ 3.95
COMMD3-201ENST00000376836 IQSEC2Q5JU85 1478 aa39.73■■■■□ 3.95
COMMD3-201ENST00000376836 KCNA6P17658 529 aa39.71■■■■□ 3.95
COMMD3-201ENST00000376836 SPATA31E1Q6ZUB1 1445 aa39.68■■■■□ 3.94
COMMD3-201ENST00000376836 DIP2AQ14689 1571 aa39.67■■■■□ 3.94
COMMD3-201ENST00000376836 ADAMTS13Q76LX8 1427 aa39.66■■■■□ 3.94
COMMD3-201ENST00000376836 SETBP1Q9Y6X0 1596 aa39.61■■■■□ 3.93
COMMD3-201ENST00000376836 PIK3R4Q99570 1358 aa39.61■■■■□ 3.93
COMMD3-201ENST00000376836 STRCP1A6NGW2 1772 aa39.59■■■■□ 3.93
COMMD3-201ENST00000376836 PROSER2Q86WR7 435 aaPredicted RBP39.58■■■■□ 3.93
COMMD3-201ENST00000376836 LRRC7Q96NW7 1537 aa39.57■■■■□ 3.93
COMMD3-201ENST00000376836 PPLO60437 1756 aa39.57■■■■□ 3.93
COMMD3-201ENST00000376836 UBAP1LF5GYI3 381 aa39.53■■■■□ 3.92
COMMD3-201ENST00000376836 NKTRP30414 1462 aaKnown RBP39.52■■■■□ 3.92
COMMD3-201ENST00000376836 NRXN3Q9Y4C0 1643 aa39.52■■■■□ 3.92
COMMD3-201ENST00000376836 NWD1Q149M9 1564 aa39.51■■■■□ 3.92
COMMD3-201ENST00000376836 ADGRF5Q8IZF2 1346 aa39.5■■■■□ 3.91
COMMD3-201ENST00000376836 AMOTL2Q9Y2J4 779 aa39.49■■■■□ 3.91
COMMD3-201ENST00000376836 CHD2O14647 1828 aaKnown RBP39.49■■■■□ 3.91
COMMD3-201ENST00000376836 TOM1O60784 492 aa39.48■■■■□ 3.91
COMMD3-201ENST00000376836 METP08581 1390 aa39.46■■■■□ 3.91
COMMD3-201ENST00000376836 TMEM94Q12767 1356 aa39.46■■■■□ 3.91
COMMD3-201ENST00000376836 IFT172Q9UG01 1749 aa39.44■■■■□ 3.9
COMMD3-201ENST00000376836 ALKQ9UM73 1620 aa39.42■■■■□ 3.9
COMMD3-201ENST00000376836 DCAF11Q8TEB1 546 aa39.4■■■■□ 3.9
COMMD3-201ENST00000376836 STAC3Q96MF2 364 aa39.4■■■■□ 3.9
COMMD3-201ENST00000376836 DHX57Q6P158 1386 aaKnown RBP39.4■■■■□ 3.9
COMMD3-201ENST00000376836 PTPRUQ92729 1446 aa39.4■■■■□ 3.9
COMMD3-201ENST00000376836 RBM33Q96EV2 1170 aaKnown RBP39.4■■■■□ 3.9
COMMD3-201ENST00000376836 PCGF6Q9BYE7 350 aa39.4■■■■□ 3.9
COMMD3-201ENST00000376836 MYOM2P54296 1465 aa39.38■■■■□ 3.89
COMMD3-201ENST00000376836 KDM2AQ9Y2K7 1162 aa39.38■■■■□ 3.89
COMMD3-201ENST00000376836 C14orf37Q86TY3 774 aa39.37■■■■□ 3.89
COMMD3-201ENST00000376836 PIK3C2GO75747 1445 aa39.35■■■■□ 3.89
COMMD3-201ENST00000376836 SCAF1Q9H7N4 1312 aaKnown RBP39.33■■■■□ 3.89
COMMD3-201ENST00000376836 NCOA3Q9Y6Q9 1424 aa39.33■■■■□ 3.89
COMMD3-201ENST00000376836 MSH6P52701 1360 aa39.32■■■■□ 3.89
COMMD3-201ENST00000376836 PIP4K2BP78356 416 aa39.32■■■■□ 3.88
COMMD3-201ENST00000376836 NRXN1Q9ULB1 1477 aa39.29■■■■□ 3.88
COMMD3-201ENST00000376836 XIRP1Q702N8 1843 aaKnown RBP39.28■■■■□ 3.88
COMMD3-201ENST00000376836 C14orf93Q9H972 538 aaKnown RBP39.28■■■■□ 3.88
COMMD3-201ENST00000376836 XRN1Q8IZH2 1706 aaKnown RBP39.27■■■■□ 3.88
COMMD3-201ENST00000376836 NEUROD1Q13562 356 aa39.27■■■■□ 3.88
COMMD3-201ENST00000376836 SETD1AO15047 1707 aaKnown RBP39.27■■■■□ 3.88
COMMD3-201ENST00000376836 SIN3AQ96ST3 1273 aa39.26■■■■□ 3.88
COMMD3-201ENST00000376836 CFAP70Q5T0N1 1121 aa39.23■■■■□ 3.87
COMMD3-201ENST00000376836 TMEM132EQ6IEE7 984 aa39.22■■■■□ 3.87
COMMD3-201ENST00000376836 C19orf44Q9H6X5 657 aa39.22■■■■□ 3.87
COMMD3-201ENST00000376836 STK26Q9P289 416 aa39.2■■■■□ 3.87
COMMD3-201ENST00000376836 LAMC1P11047 1609 aa39.18■■■■□ 3.86
COMMD3-201ENST00000376836 ATF3P18847 181 aa39.18■■■■□ 3.86
COMMD3-201ENST00000376836 PTCH1Q13635 1447 aa39.18■■■■□ 3.86
COMMD3-201ENST00000376836 LRPPRCP42704 1394 aaKnown RBP39.16■■■■□ 3.86
COMMD3-201ENST00000376836 CADPS2Q86UW7 1296 aa39.15■■■■□ 3.86
COMMD3-201ENST00000376836 ROBO2Q9HCK4 1378 aa39.14■■■■□ 3.86
COMMD3-201ENST00000376836 PRAG1Q86YV5 1406 aa39.13■■■■□ 3.85
COMMD3-201ENST00000376836 ABCC11Q96J66 1382 aa39.12■■■■□ 3.85
COMMD3-201ENST00000376836 YTHDC2Q9H6S0 1430 aaKnown RBP39.11■■■■□ 3.85
COMMD3-201ENST00000376836 L3MBTL2Q969R5 705 aa39.11■■■■□ 3.85
COMMD3-201ENST00000376836 SLAIN2Q9P270 581 aa39.1■■■■□ 3.85
COMMD3-201ENST00000376836 ILDR2Q71H61 639 aa39.09■■■■□ 3.85
COMMD3-201ENST00000376836 ASXL1Q8IXJ9 1541 aa39.08■■■■□ 3.85
COMMD3-201ENST00000376836 DISP3Q9P2K9 1392 aa39.07■■■■□ 3.85
COMMD3-201ENST00000376836 TECPR2O15040 1411 aa39.05■■■■□ 3.84
COMMD3-201ENST00000376836 DCCP43146 1447 aa39.05■■■■□ 3.84
COMMD3-201ENST00000376836 ADGRL3Q9HAR2 1447 aa39.05■■■■□ 3.84
COMMD3-201ENST00000376836 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.04■■■■□ 3.84
COMMD3-201ENST00000376836 SIRT1Q96EB6 747 aa39.03■■■■□ 3.84
COMMD3-201ENST00000376836 FAM135BQ49AJ0 1406 aa39.01■■■■□ 3.84
COMMD3-201ENST00000376836 WAPLQ7Z5K2 1190 aa39■■■■□ 3.83
COMMD3-201ENST00000376836 TONSLQ96HA7 1378 aa38.99■■■■□ 3.83
COMMD3-201ENST00000376836 KNDC1Q76NI1 1749 aa38.98■■■■□ 3.83
COMMD3-201ENST00000376836 HSPA1LP34931 641 aa38.97■■■■□ 3.83
COMMD3-201ENST00000376836 POGKQ9P215 609 aa38.95■■■■□ 3.83
COMMD3-201ENST00000376836 TRAK1Q9UPV9 953 aa38.95■■■■□ 3.83
COMMD3-201ENST00000376836 ADGRB1O14514 1584 aa38.95■■■■□ 3.83
COMMD3-201ENST00000376836 NALCNQ8IZF0 1738 aa38.93■■■■□ 3.82
COMMD3-201ENST00000376836 PRAM1Q96QH2 718 aa38.91■■■■□ 3.82
COMMD3-201ENST00000376836 PLEKHH1Q9ULM0 1364 aa38.89■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms