RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 ROCK1Q13464 1354 aa26.92■■□□□ 1.9
HLA-A-201ENST00000376802 E9PCH4 1651 aa26.91■■□□□ 1.9
HLA-A-201ENST00000376802 NWD1Q149M9 1564 aa26.9■■□□□ 1.9
HLA-A-201ENST00000376802 RBM33Q96EV2 1170 aaKnown RBP26.89■■□□□ 1.89
HLA-A-201ENST00000376802 IQGAP3Q86VI3 1631 aa26.87■■□□□ 1.89
HLA-A-201ENST00000376802 PROSER2Q86WR7 435 aaPredicted RBP26.87■■□□□ 1.89
HLA-A-201ENST00000376802 CHD2O14647 1828 aaKnown RBP26.86■■□□□ 1.89
HLA-A-201ENST00000376802 FAM135BQ49AJ0 1406 aa26.86■■□□□ 1.89
HLA-A-201ENST00000376802 RIMS2Q9UQ26 1411 aa26.86■■□□□ 1.89
HLA-A-201ENST00000376802 PLEKHG1Q9ULL1 1385 aa26.86■■□□□ 1.89
HLA-A-201ENST00000376802 NKTRP30414 1462 aaKnown RBP26.85■■□□□ 1.89
HLA-A-201ENST00000376802 BCANQ96GW7 911 aa26.83■■□□□ 1.89
HLA-A-201ENST00000376802 PHF23Q9BUL5 403 aaPredicted RBP26.81■■□□□ 1.88
HLA-A-201ENST00000376802 ROBO1Q9Y6N7 1651 aa26.8■■□□□ 1.88
HLA-A-201ENST00000376802 PPARGC1BQ86YN6 1023 aaKnown RBP26.8■■□□□ 1.88
HLA-A-201ENST00000376802 ITGAEP38570 1179 aa26.79■■□□□ 1.88
HLA-A-201ENST00000376802 HDGFP51858 240 aaKnown RBP26.79■■□□□ 1.88
HLA-A-201ENST00000376802 PPP1R15AO75807 674 aaPredicted RBP26.78■■□□□ 1.88
HLA-A-201ENST00000376802 NUP155O75694 1391 aa26.78■■□□□ 1.88
HLA-A-201ENST00000376802 TBX22Q9Y458 520 aa26.77■■□□□ 1.88
HLA-A-201ENST00000376802 CHGAP10645 457 aaKnown RBP26.76■■□□□ 1.87
HLA-A-201ENST00000376802 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.75■■□□□ 1.87
HLA-A-201ENST00000376802 ADAMTS13Q76LX8 1427 aa26.74■■□□□ 1.87
HLA-A-201ENST00000376802 NUTM2DQ5VT03 806 aaPredicted RBP26.74■■□□□ 1.87
HLA-A-201ENST00000376802 RGS17Q9UGC6 210 aaPredicted RBP26.73■■□□□ 1.87
HLA-A-201ENST00000376802 MSH6P52701 1360 aa26.72■■□□□ 1.87
HLA-A-201ENST00000376802 SLAIN2Q9P270 581 aa26.7■■□□□ 1.87
HLA-A-201ENST00000376802 DIP2AQ14689 1571 aa26.69■■□□□ 1.86
HLA-A-201ENST00000376802 SPHKAPQ2M3C7 1700 aa26.67■■□□□ 1.86
HLA-A-201ENST00000376802 NCOA3Q9Y6Q9 1424 aa26.66■■□□□ 1.86
HLA-A-201ENST00000376802 PHLPP1O60346 1717 aa26.65■■□□□ 1.86
HLA-A-201ENST00000376802 PIK3R4Q99570 1358 aa26.64■■□□□ 1.86
HLA-A-201ENST00000376802 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.63■■□□□ 1.85
HLA-A-201ENST00000376802 NRXN3Q9Y4C0 1643 aa26.61■■□□□ 1.85
HLA-A-201ENST00000376802 PTPRUQ92729 1446 aa26.61■■□□□ 1.85
HLA-A-201ENST00000376802 TRPM2O94759 1503 aa26.61■■□□□ 1.85
HLA-A-201ENST00000376802 RRBP1Q9P2E9 1410 aaKnown RBP26.6■■□□□ 1.85
HLA-A-201ENST00000376802 AMOTL2Q9Y2J4 779 aa26.58■■□□□ 1.85
HLA-A-201ENST00000376802 COL16A1Q07092 1604 aaPredicted RBP26.57■■□□□ 1.84
HLA-A-201ENST00000376802 C19orf44Q9H6X5 657 aa26.57■■□□□ 1.84
HLA-A-201ENST00000376802 SETBP1Q9Y6X0 1596 aa26.56■■□□□ 1.84
HLA-A-201ENST00000376802 C14orf37Q86TY3 774 aa26.56■■□□□ 1.84
HLA-A-201ENST00000376802 CLTCL1P53675 1640 aa26.55■■□□□ 1.84
HLA-A-201ENST00000376802 NAIPQ13075 1403 aa26.55■■□□□ 1.84
HLA-A-201ENST00000376802 POTEAQ6S8J7 498 aa26.55■■□□□ 1.84
HLA-A-201ENST00000376802 XRN1Q8IZH2 1706 aaKnown RBP26.54■■□□□ 1.84
HLA-A-201ENST00000376802 CADPS2Q86UW7 1296 aa26.53■■□□□ 1.84
HLA-A-201ENST00000376802 JCADQ9P266 1359 aa26.53■■□□□ 1.84
HLA-A-201ENST00000376802 ATF3P18847 181 aa26.5■■□□□ 1.83
HLA-A-201ENST00000376802 ZNF326Q5BKZ1 582 aaKnown RBP26.5■■□□□ 1.83
HLA-A-201ENST00000376802 NEXMIFQ5QGS0 1516 aa26.5■■□□□ 1.83
HLA-A-201ENST00000376802 METP08581 1390 aa26.49■■□□□ 1.83
HLA-A-201ENST00000376802 KIF1BO60333 1816 aa26.49■■□□□ 1.83
HLA-A-201ENST00000376802 AHDC1Q5TGY3 1603 aaPredicted RBP26.49■■□□□ 1.83
HLA-A-201ENST00000376802 DCCP43146 1447 aa26.45■■□□□ 1.82
HLA-A-201ENST00000376802 BRINP3Q76B58 766 aa26.43■■□□□ 1.82
HLA-A-201ENST00000376802 HFM1A2PYH4 1435 aa26.43■■□□□ 1.82
HLA-A-201ENST00000376802 LRP6O75581 1613 aa26.43■■□□□ 1.82
HLA-A-201ENST00000376802 SHPRHQ149N8 1683 aa26.42■■□□□ 1.82
HLA-A-201ENST00000376802 SPATA31A6Q5VVP1 1343 aa26.4■■□□□ 1.82
HLA-A-201ENST00000376802 MST1RQ04912 1400 aa26.39■■□□□ 1.81
HLA-A-201ENST00000376802 TRIM52Q96A61 297 aa26.38■■□□□ 1.81
HLA-A-201ENST00000376802 SETD1AO15047 1707 aaKnown RBP26.37■■□□□ 1.81
HLA-A-201ENST00000376802 NALCNQ8IZF0 1738 aa26.37■■□□□ 1.81
HLA-A-201ENST00000376802 ASXL1Q8IXJ9 1541 aa26.37■■□□□ 1.81
HLA-A-201ENST00000376802 ADGRL3Q9HAR2 1447 aa26.35■■□□□ 1.81
HLA-A-201ENST00000376802 NHSL1Q5SYE7 1610 aa26.35■■□□□ 1.81
HLA-A-201ENST00000376802 VGFO15240 615 aaPredicted RBP26.32■■□□□ 1.8
HLA-A-201ENST00000376802 SLC4A1APQ9BWU0 796 aaKnown RBP26.32■■□□□ 1.8
HLA-A-201ENST00000376802 PPLO60437 1756 aa26.31■■□□□ 1.8
HLA-A-201ENST00000376802 SETD5Q9C0A6 1442 aa26.3■■□□□ 1.8
HLA-A-201ENST00000376802 MEX3CQ5U5Q3 659 aaKnown RBP26.28■■□□□ 1.8
HLA-A-201ENST00000376802 RPGRIP1LQ68CZ1 1315 aa26.28■■□□□ 1.8
HLA-A-201ENST00000376802 ROBO2Q9HCK4 1378 aa26.27■■□□□ 1.8
HLA-A-201ENST00000376802 PTCH1Q13635 1447 aa26.27■■□□□ 1.8
HLA-A-201ENST00000376802 DDX17Q92841 729 aaKnown RBP26.26■■□□□ 1.79
HLA-A-201ENST00000376802 PRAG1Q86YV5 1406 aa26.25■■□□□ 1.79
HLA-A-201ENST00000376802 FOXD1Q16676 465 aa26.25■■□□□ 1.79
HLA-A-201ENST00000376802 ZNF772Q68DY9 489 aaPredicted RBP26.24■■□□□ 1.79
HLA-A-201ENST00000376802 NUTM2BA6NNL0 878 aaPredicted RBP26.23■■□□□ 1.79
HLA-A-201ENST00000376802 NUTM2EB1AL46 878 aaPredicted RBP26.23■■□□□ 1.79
HLA-A-201ENST00000376802 NUTM2AQ8IVF1 878 aaPredicted RBP26.23■■□□□ 1.79
HLA-A-201ENST00000376802 LRRC59Q96AG4 307 aaKnown RBP26.23■■□□□ 1.79
HLA-A-201ENST00000376802 C1orf167Q5SNV9 1468 aa26.23■■□□□ 1.79
HLA-A-201ENST00000376802 LAMC1P11047 1609 aa26.21■■□□□ 1.79
HLA-A-201ENST00000376802 PNPLA6Q8IY17 1366 aa26.19■■□□□ 1.78
HLA-A-201ENST00000376802 ORAI2Q96SN7 254 aa26.16■■□□□ 1.78
HLA-A-201ENST00000376802 SPATA31E1Q6ZUB1 1445 aa26.16■■□□□ 1.78
HLA-A-201ENST00000376802 IFT172Q9UG01 1749 aa26.15■■□□□ 1.78
HLA-A-201ENST00000376802 ADGRF5Q8IZF2 1346 aa26.15■■□□□ 1.78
HLA-A-201ENST00000376802 MPHOSPH9Q99550 1183 aa26.14■■□□□ 1.78
HLA-A-201ENST00000376802 AFF2P51816 1311 aa26.14■■□□□ 1.78
HLA-A-201ENST00000376802 CCDC144AA2RUR9 1427 aa26.14■■□□□ 1.77
HLA-A-201ENST00000376802 SOS2Q07890 1332 aaPredicted RBP26.12■■□□□ 1.77
HLA-A-201ENST00000376802 RXRBP28702 533 aa26.12■■□□□ 1.77
HLA-A-201ENST00000376802 RGL3Q3MIN7 710 aa26.11■■□□□ 1.77
HLA-A-201ENST00000376802 C8orf37Q96NL8 207 aa26.09■■□□□ 1.77
HLA-A-201ENST00000376802 CDK12Q9NYV4 1490 aaPredicted RBP26.08■■□□□ 1.77
HLA-A-201ENST00000376802 CDC42BPGQ6DT37 1551 aa26.08■■□□□ 1.77
HLA-A-201ENST00000376802 UPF1Q92900 1129 aaKnown RBP eCLIP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms