RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 RBM33Q96EV2 1170 aaKnown RBP23.05■■□□□ 1.28
CLCN6-204ENST00000376491 E9PCH4 1651 aa23.04■■□□□ 1.28
CLCN6-204ENST00000376491 NWD1Q149M9 1564 aa23.04■■□□□ 1.28
CLCN6-204ENST00000376491 ROCK1Q13464 1354 aa23.03■■□□□ 1.28
CLCN6-204ENST00000376491 PROSER2Q86WR7 435 aaPredicted RBP23.03■■□□□ 1.28
CLCN6-204ENST00000376491 FAM135BQ49AJ0 1406 aa23.02■■□□□ 1.28
CLCN6-204ENST00000376491 RIMS2Q9UQ26 1411 aa23.01■■□□□ 1.27
CLCN6-204ENST00000376491 BCANQ96GW7 911 aa23.01■■□□□ 1.27
CLCN6-204ENST00000376491 PHF23Q9BUL5 403 aaPredicted RBP23.01■■□□□ 1.27
CLCN6-204ENST00000376491 PLEKHG1Q9ULL1 1385 aa23.01■■□□□ 1.27
CLCN6-204ENST00000376491 NKTRP30414 1462 aaKnown RBP23■■□□□ 1.27
CLCN6-204ENST00000376491 CHD2O14647 1828 aaKnown RBP23■■□□□ 1.27
CLCN6-204ENST00000376491 IQGAP3Q86VI3 1631 aa23■■□□□ 1.27
CLCN6-204ENST00000376491 PPARGC1BQ86YN6 1023 aaKnown RBP22.97■■□□□ 1.27
CLCN6-204ENST00000376491 ROBO1Q9Y6N7 1651 aa22.97■■□□□ 1.27
CLCN6-204ENST00000376491 CHGAP10645 457 aaKnown RBP22.96■■□□□ 1.27
CLCN6-204ENST00000376491 PPP1R15AO75807 674 aaPredicted RBP22.95■■□□□ 1.26
CLCN6-204ENST00000376491 ITGAEP38570 1179 aa22.95■■□□□ 1.26
CLCN6-204ENST00000376491 HDGFP51858 240 aaKnown RBP22.95■■□□□ 1.26
CLCN6-204ENST00000376491 NUP155O75694 1391 aa22.94■■□□□ 1.26
CLCN6-204ENST00000376491 NUTM2DQ5VT03 806 aaPredicted RBP22.93■■□□□ 1.26
CLCN6-204ENST00000376491 TBX22Q9Y458 520 aa22.93■■□□□ 1.26
CLCN6-204ENST00000376491 RGS17Q9UGC6 210 aaPredicted RBP22.92■■□□□ 1.26
CLCN6-204ENST00000376491 ADAMTS13Q76LX8 1427 aa22.91■■□□□ 1.26
CLCN6-204ENST00000376491 MSH6P52701 1360 aa22.91■■□□□ 1.26
CLCN6-204ENST00000376491 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.91■■□□□ 1.26
CLCN6-204ENST00000376491 SLAIN2Q9P270 581 aa22.87■■□□□ 1.25
CLCN6-204ENST00000376491 DIP2AQ14689 1571 aa22.84■■□□□ 1.25
CLCN6-204ENST00000376491 SPHKAPQ2M3C7 1700 aa22.83■■□□□ 1.25
CLCN6-204ENST00000376491 NCOA3Q9Y6Q9 1424 aa22.82■■□□□ 1.24
CLCN6-204ENST00000376491 PHLPP1O60346 1717 aa22.82■■□□□ 1.24
CLCN6-204ENST00000376491 PIK3R4Q99570 1358 aa22.82■■□□□ 1.24
CLCN6-204ENST00000376491 PTPRUQ92729 1446 aa22.81■■□□□ 1.24
CLCN6-204ENST00000376491 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.8■■□□□ 1.24
CLCN6-204ENST00000376491 NRXN3Q9Y4C0 1643 aa22.79■■□□□ 1.24
CLCN6-204ENST00000376491 TRPM2O94759 1503 aa22.79■■□□□ 1.24
CLCN6-204ENST00000376491 RRBP1Q9P2E9 1410 aaKnown RBP22.78■■□□□ 1.24
CLCN6-204ENST00000376491 POTEAQ6S8J7 498 aa22.77■■□□□ 1.24
CLCN6-204ENST00000376491 C14orf37Q86TY3 774 aa22.77■■□□□ 1.24
CLCN6-204ENST00000376491 AMOTL2Q9Y2J4 779 aa22.77■■□□□ 1.24
CLCN6-204ENST00000376491 COL16A1Q07092 1604 aaPredicted RBP22.76■■□□□ 1.23
CLCN6-204ENST00000376491 C19orf44Q9H6X5 657 aa22.75■■□□□ 1.23
CLCN6-204ENST00000376491 JCADQ9P266 1359 aa22.75■■□□□ 1.23
CLCN6-204ENST00000376491 SETBP1Q9Y6X0 1596 aa22.74■■□□□ 1.23
CLCN6-204ENST00000376491 CLTCL1P53675 1640 aa22.73■■□□□ 1.23
CLCN6-204ENST00000376491 CADPS2Q86UW7 1296 aa22.73■■□□□ 1.23
CLCN6-204ENST00000376491 XRN1Q8IZH2 1706 aaKnown RBP22.73■■□□□ 1.23
CLCN6-204ENST00000376491 NAIPQ13075 1403 aa22.73■■□□□ 1.23
CLCN6-204ENST00000376491 ZNF326Q5BKZ1 582 aaKnown RBP22.72■■□□□ 1.23
CLCN6-204ENST00000376491 ATF3P18847 181 aa22.71■■□□□ 1.23
CLCN6-204ENST00000376491 AHDC1Q5TGY3 1603 aaPredicted RBP22.69■■□□□ 1.22
CLCN6-204ENST00000376491 NEXMIFQ5QGS0 1516 aa22.69■■□□□ 1.22
CLCN6-204ENST00000376491 METP08581 1390 aa22.69■■□□□ 1.22
CLCN6-204ENST00000376491 KIF1BO60333 1816 aa22.67■■□□□ 1.22
CLCN6-204ENST00000376491 LRP6O75581 1613 aa22.65■■□□□ 1.22
CLCN6-204ENST00000376491 BRINP3Q76B58 766 aa22.65■■□□□ 1.22
CLCN6-204ENST00000376491 DCCP43146 1447 aa22.65■■□□□ 1.22
CLCN6-204ENST00000376491 SPATA31A6Q5VVP1 1343 aa22.62■■□□□ 1.21
CLCN6-204ENST00000376491 SHPRHQ149N8 1683 aa22.62■■□□□ 1.21
CLCN6-204ENST00000376491 HFM1A2PYH4 1435 aa22.61■■□□□ 1.21
CLCN6-204ENST00000376491 MST1RQ04912 1400 aa22.61■■□□□ 1.21
CLCN6-204ENST00000376491 TRIM52Q96A61 297 aa22.6■■□□□ 1.21
CLCN6-204ENST00000376491 ASXL1Q8IXJ9 1541 aa22.59■■□□□ 1.21
CLCN6-204ENST00000376491 SETD1AO15047 1707 aaKnown RBP22.58■■□□□ 1.21
CLCN6-204ENST00000376491 NALCNQ8IZF0 1738 aa22.58■■□□□ 1.21
CLCN6-204ENST00000376491 ADGRL3Q9HAR2 1447 aa22.57■■□□□ 1.2
CLCN6-204ENST00000376491 NHSL1Q5SYE7 1610 aa22.57■■□□□ 1.2
CLCN6-204ENST00000376491 SLC4A1APQ9BWU0 796 aaKnown RBP22.55■■□□□ 1.2
CLCN6-204ENST00000376491 MEX3CQ5U5Q3 659 aaKnown RBP22.54■■□□□ 1.2
CLCN6-204ENST00000376491 VGFO15240 615 aaPredicted RBP22.53■■□□□ 1.2
CLCN6-204ENST00000376491 SETD5Q9C0A6 1442 aa22.53■■□□□ 1.2
CLCN6-204ENST00000376491 DDX17Q92841 729 aaKnown RBP22.52■■□□□ 1.2
CLCN6-204ENST00000376491 PPLO60437 1756 aa22.52■■□□□ 1.2
CLCN6-204ENST00000376491 RPGRIP1LQ68CZ1 1315 aa22.51■■□□□ 1.19
CLCN6-204ENST00000376491 NUTM2BA6NNL0 878 aaPredicted RBP22.5■■□□□ 1.19
CLCN6-204ENST00000376491 NUTM2EB1AL46 878 aaPredicted RBP22.5■■□□□ 1.19
CLCN6-204ENST00000376491 ZNF772Q68DY9 489 aaPredicted RBP22.5■■□□□ 1.19
CLCN6-204ENST00000376491 NUTM2AQ8IVF1 878 aaPredicted RBP22.5■■□□□ 1.19
CLCN6-204ENST00000376491 ROBO2Q9HCK4 1378 aa22.5■■□□□ 1.19
CLCN6-204ENST00000376491 PTCH1Q13635 1447 aa22.49■■□□□ 1.19
CLCN6-204ENST00000376491 FOXD1Q16676 465 aa22.49■■□□□ 1.19
CLCN6-204ENST00000376491 C1orf167Q5SNV9 1468 aa22.47■■□□□ 1.19
CLCN6-204ENST00000376491 LRRC59Q96AG4 307 aaKnown RBP22.47■■□□□ 1.19
CLCN6-204ENST00000376491 PRAG1Q86YV5 1406 aa22.47■■□□□ 1.19
CLCN6-204ENST00000376491 PNPLA6Q8IY17 1366 aa22.44■■□□□ 1.18
CLCN6-204ENST00000376491 LAMC1P11047 1609 aa22.43■■□□□ 1.18
CLCN6-204ENST00000376491 AFF2P51816 1311 aa22.42■■□□□ 1.18
CLCN6-204ENST00000376491 ORAI2Q96SN7 254 aa22.42■■□□□ 1.18
CLCN6-204ENST00000376491 ADGRF5Q8IZF2 1346 aa22.41■■□□□ 1.18
CLCN6-204ENST00000376491 SPATA31E1Q6ZUB1 1445 aa22.4■■□□□ 1.18
CLCN6-204ENST00000376491 RXRBP28702 533 aa22.39■■□□□ 1.17
CLCN6-204ENST00000376491 MPHOSPH9Q99550 1183 aa22.39■■□□□ 1.17
CLCN6-204ENST00000376491 CCDC144AA2RUR9 1427 aa22.39■■□□□ 1.17
CLCN6-204ENST00000376491 SOS2Q07890 1332 aaPredicted RBP22.38■■□□□ 1.17
CLCN6-204ENST00000376491 IFT172Q9UG01 1749 aa22.38■■□□□ 1.17
CLCN6-204ENST00000376491 RGL3Q3MIN7 710 aa22.38■■□□□ 1.17
CLCN6-204ENST00000376491 UPF1Q92900 1129 aaKnown RBP eCLIP22.36■■□□□ 1.17
CLCN6-204ENST00000376491 C8orf37Q96NL8 207 aa22.35■■□□□ 1.17
CLCN6-204ENST00000376491 CDK12Q9NYV4 1490 aaPredicted RBP22.34■■□□□ 1.17
CLCN6-204ENST00000376491 CDC42BPGQ6DT37 1551 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms