RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 WDR97A6NE52 1622 aa10.77□□□□□ -0.69
SHROOM4-202ENST00000376020 CLUAP1Q96AJ1 413 aa10.77□□□□□ -0.69
SHROOM4-202ENST00000376020 U2AF1L5P0DN76 240 aaPredicted RBP10.77□□□□□ -0.69
SHROOM4-202ENST00000376020 U2AF1Q01081 240 aaKnown RBP eCLIP10.77□□□□□ -0.69
SHROOM4-202ENST00000376020 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.77□□□□□ -0.69
SHROOM4-202ENST00000376020 NCOA2Q15596 1464 aa10.76□□□□□ -0.69
SHROOM4-202ENST00000376020 NEUROD2Q15784 382 aa10.76□□□□□ -0.69
SHROOM4-202ENST00000376020 INTS3Q68E01 1043 aaKnown RBP10.76□□□□□ -0.69
SHROOM4-202ENST00000376020 TSR1Q2NL82 804 aaKnown RBP10.75□□□□□ -0.69
SHROOM4-202ENST00000376020 ZKSCAN1P17029 563 aaPredicted RBP10.75□□□□□ -0.69
SHROOM4-202ENST00000376020 CDR1P51861 262 aa10.75□□□□□ -0.69
SHROOM4-202ENST00000376020 EFCAB2Q5VUJ9 269 aa10.75□□□□□ -0.69
SHROOM4-202ENST00000376020 ERCC4Q92889 916 aaPredicted RBP10.75□□□□□ -0.69
SHROOM4-202ENST00000376020 API5Q9BZZ5 524 aaKnown RBP10.75□□□□□ -0.69
SHROOM4-202ENST00000376020 CFAP43Q8NDM7 1665 aa10.75□□□□□ -0.69
SHROOM4-202ENST00000376020 CCDC141Q6ZP82 1450 aa10.75□□□□□ -0.69
SHROOM4-202ENST00000376020 CAVIN2O95810 425 aa10.75□□□□□ -0.69
SHROOM4-202ENST00000376020 HSP90B2PQ58FF3 399 aa10.75□□□□□ -0.69
SHROOM4-202ENST00000376020 KAT6BQ8WYB5 2073 aa10.75□□□□□ -0.69
SHROOM4-202ENST00000376020 RNF20Q5VTR2 975 aa10.74□□□□□ -0.69
SHROOM4-202ENST00000376020 BECN2A8MW95 431 aa10.74□□□□□ -0.69
SHROOM4-202ENST00000376020 IPO7O95373 1038 aaKnown RBP10.74□□□□□ -0.69
SHROOM4-202ENST00000376020 ANKRD20A12PQ8NF67 263 aa10.74□□□□□ -0.69
SHROOM4-202ENST00000376020 C22orf23Q9BZE7 217 aa10.74□□□□□ -0.69
SHROOM4-202ENST00000376020 ERCC6Q03468 1493 aa10.74□□□□□ -0.69
SHROOM4-202ENST00000376020 PLEKHH1Q9ULM0 1364 aa10.73□□□□□ -0.69
SHROOM4-202ENST00000376020 CTTNBP2Q8WZ74 1663 aa10.73□□□□□ -0.69
SHROOM4-202ENST00000376020 USP8P40818 1118 aa10.73□□□□□ -0.69
SHROOM4-202ENST00000376020 ZNF771Q7L3S4 317 aaPredicted RBP10.73□□□□□ -0.69
SHROOM4-202ENST00000376020 C11orf95C9JLR9 678 aaPredicted RBP10.73□□□□□ -0.69
SHROOM4-202ENST00000376020 PDCL3Q9H2J4 239 aa10.73□□□□□ -0.69
SHROOM4-202ENST00000376020 DAPK1P53355 1430 aa10.73□□□□□ -0.69
SHROOM4-202ENST00000376020 ANO8Q9HCE9 1232 aaPredicted RBP10.73□□□□□ -0.69
SHROOM4-202ENST00000376020 DZIP1LQ8IYY4 767 aaKnown RBP10.72□□□□□ -0.69
SHROOM4-202ENST00000376020 HSP90AB4PQ58FF6 505 aa10.72□□□□□ -0.69
SHROOM4-202ENST00000376020 PTPN23Q9H3S7 1636 aa10.72□□□□□ -0.69
SHROOM4-202ENST00000376020 ARAP1Q96P48 1450 aa10.72□□□□□ -0.69
SHROOM4-202ENST00000376020 EVC2Q86UK5 1308 aa10.72□□□□□ -0.69
SHROOM4-202ENST00000376020 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.72□□□□□ -0.69
SHROOM4-202ENST00000376020 EIF2AK4Q9P2K8 1649 aaKnown RBP10.71□□□□□ -0.69
SHROOM4-202ENST00000376020 ST20-MTHFSA0A0A6YYL1 179 aa10.71□□□□□ -0.69
SHROOM4-202ENST00000376020 ESPNB1AK53 854 aa10.71□□□□□ -0.69
SHROOM4-202ENST00000376020 CPLX2Q6PUV4 134 aaKnown RBP10.71□□□□□ -0.69
SHROOM4-202ENST00000376020 UBE2Q2Q8WVN8 375 aa10.71□□□□□ -0.7
SHROOM4-202ENST00000376020 HS1BP3Q53T59 392 aa10.71□□□□□ -0.7
SHROOM4-202ENST00000376020 NOC3LQ8WTT2 800 aaKnown RBP10.71□□□□□ -0.7
SHROOM4-202ENST00000376020 ZSCAN30Q86W11 494 aa10.7□□□□□ -0.7
SHROOM4-202ENST00000376020 NCAPD3P42695 1498 aa10.7□□□□□ -0.7
SHROOM4-202ENST00000376020 ANKRD50Q9ULJ7 1429 aa10.7□□□□□ -0.7
SHROOM4-202ENST00000376020 GAPVD1Q14C86 1478 aa10.7□□□□□ -0.7
SHROOM4-202ENST00000376020 TRAK2O60296 914 aa10.7□□□□□ -0.7
SHROOM4-202ENST00000376020 RUNDC1Q96C34 613 aa10.7□□□□□ -0.7
SHROOM4-202ENST00000376020 KIAA1107Q9UPP5 1409 aa10.7□□□□□ -0.7
SHROOM4-202ENST00000376020 SRPK2P78362 688 aaKnown RBP10.7□□□□□ -0.7
SHROOM4-202ENST00000376020 FAM13BQ9NYF5 915 aa10.7□□□□□ -0.7
SHROOM4-202ENST00000376020 AK7Q96M32 723 aa10.69□□□□□ -0.7
SHROOM4-202ENST00000376020 GCC1Q96CN9 775 aa10.69□□□□□ -0.7
SHROOM4-202ENST00000376020 CDC45O75419 566 aa10.69□□□□□ -0.7
SHROOM4-202ENST00000376020 INSRP06213 1382 aa10.69□□□□□ -0.7
SHROOM4-202ENST00000376020 TXLNBQ8N3L3 684 aa10.68□□□□□ -0.7
SHROOM4-202ENST00000376020 DCTN1Q14203 1278 aa10.68□□□□□ -0.7
SHROOM4-202ENST00000376020 CFTRP13569 1480 aa10.68□□□□□ -0.7
SHROOM4-202ENST00000376020 FANCD2Q9BXW9 1451 aa10.68□□□□□ -0.7
SHROOM4-202ENST00000376020 EXOC6Q8TAG9 804 aa10.68□□□□□ -0.7
SHROOM4-202ENST00000376020 ATAD2Q6PL18 1390 aa10.68□□□□□ -0.7
SHROOM4-202ENST00000376020 CRBNQ96SW2 442 aa10.68□□□□□ -0.7
SHROOM4-202ENST00000376020 HIP1O00291 1037 aa10.67□□□□□ -0.7
SHROOM4-202ENST00000376020 FAM107BQ9H098 131 aa10.67□□□□□ -0.7
SHROOM4-202ENST00000376020 ZMYM3Q14202 1370 aa10.67□□□□□ -0.7
SHROOM4-202ENST00000376020 PIP4K2AP48426 406 aaPredicted RBP10.66□□□□□ -0.7
SHROOM4-202ENST00000376020 TRIM6-TRIM34B2RNG4 842 aa10.66□□□□□ -0.7
SHROOM4-202ENST00000376020 NKTRP30414 1462 aaKnown RBP10.66□□□□□ -0.7
SHROOM4-202ENST00000376020 DNMBPQ6XZF7 1577 aa10.65□□□□□ -0.7
SHROOM4-202ENST00000376020 GNAI1P63096 354 aa10.65□□□□□ -0.7
SHROOM4-202ENST00000376020 ERC2O15083 957 aa10.65□□□□□ -0.7
SHROOM4-202ENST00000376020 H3BQV1 296 aa10.65□□□□□ -0.7
SHROOM4-202ENST00000376020 TUBB4AP04350 444 aa10.65□□□□□ -0.7
SHROOM4-202ENST00000376020 IFFO2Q5TF58 517 aa10.65□□□□□ -0.7
SHROOM4-202ENST00000376020 RUSC2Q8N2Y8 1516 aa10.65□□□□□ -0.7
SHROOM4-202ENST00000376020 PANK3Q9H999 370 aa10.65□□□□□ -0.7
SHROOM4-202ENST00000376020 NCOA1Q15788 1441 aa10.65□□□□□ -0.71
SHROOM4-202ENST00000376020 DYNC1I1O14576 645 aa10.65□□□□□ -0.71
SHROOM4-202ENST00000376020 PSMA5P28066 241 aa10.65□□□□□ -0.71
SHROOM4-202ENST00000376020 PNISRQ8TF01 805 aaKnown RBP10.64□□□□□ -0.71
SHROOM4-202ENST00000376020 GRPEL1Q9HAV7 217 aa10.64□□□□□ -0.71
SHROOM4-202ENST00000376020 MYO6Q9UM54 1294 aa10.64□□□□□ -0.71
SHROOM4-202ENST00000376020 IGF1RP08069 1367 aa10.64□□□□□ -0.71
SHROOM4-202ENST00000376020 PLPPR3Q6T4P5 718 aa10.64□□□□□ -0.71
SHROOM4-202ENST00000376020 WDR63Q8IWG1 891 aa10.64□□□□□ -0.71
SHROOM4-202ENST00000376020 TUBB4BP68371 445 aa10.64□□□□□ -0.71
SHROOM4-202ENST00000376020 SPRYD3Q8NCJ5 442 aa10.64□□□□□ -0.71
SHROOM4-202ENST00000376020 VGFO15240 615 aaPredicted RBP10.64□□□□□ -0.71
SHROOM4-202ENST00000376020 SF3A1Q15459 793 aaKnown RBP10.64□□□□□ -0.71
SHROOM4-202ENST00000376020 SASS6Q6UVJ0 657 aa10.64□□□□□ -0.71
SHROOM4-202ENST00000376020 CAGE1Q8TC20 777 aa10.64□□□□□ -0.71
SHROOM4-202ENST00000376020 ARHGEF12Q9NZN5 1544 aa10.64□□□□□ -0.71
SHROOM4-202ENST00000376020 EIF3JO75822 258 aaKnown RBP10.64□□□□□ -0.71
SHROOM4-202ENST00000376020 CCDC73Q6ZRK6 1079 aa10.64□□□□□ -0.71
SHROOM4-202ENST00000376020 CCDC192P0DO97 292 aa10.63□□□□□ -0.71
SHROOM4-202ENST00000376020 IQCEQ6IPM2 695 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms