RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 PIP4K2BP78356 416 aa25.74■■□□□ 1.71
C6orf48-207ENST00000375642 TOM1O60784 492 aa25.72■■□□□ 1.71
C6orf48-207ENST00000375642 HSPA1LP34931 641 aa25.72■■□□□ 1.71
C6orf48-207ENST00000375642 HDGFP51858 240 aaKnown RBP25.72■■□□□ 1.71
C6orf48-207ENST00000375642 CPS1P31327 1500 aa25.72■■□□□ 1.71
C6orf48-207ENST00000375642 SCAF11Q99590 1463 aaKnown RBP25.72■■□□□ 1.71
C6orf48-207ENST00000375642 TMEM131LA2VDJ0 1609 aa25.71■■□□□ 1.71
C6orf48-207ENST00000375642 NPHP4O75161 1426 aaPredicted RBP25.71■■□□□ 1.71
C6orf48-207ENST00000375642 MED14O60244 1454 aa25.7■■□□□ 1.7
C6orf48-207ENST00000375642 NEURL4Q96JN8 1562 aa25.69■■□□□ 1.7
C6orf48-207ENST00000375642 POLR1AO95602 1720 aaPredicted RBP25.68■■□□□ 1.7
C6orf48-207ENST00000375642 CLTCL1P53675 1640 aa25.68■■□□□ 1.7
C6orf48-207ENST00000375642 ZNF326Q5BKZ1 582 aaKnown RBP25.68■■□□□ 1.7
C6orf48-207ENST00000375642 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.67■■□□□ 1.72e-28■■□□□ 14
C6orf48-207ENST00000375642 RIMS2Q9UQ26 1411 aa25.67■■□□□ 1.7
C6orf48-207ENST00000375642 CCDC144AA2RUR9 1427 aa25.66■■□□□ 1.7
C6orf48-207ENST00000375642 PPP1R15AO75807 674 aaPredicted RBP25.66■■□□□ 1.7
C6orf48-207ENST00000375642 PHF23Q9BUL5 403 aaPredicted RBP25.66■■□□□ 1.7
C6orf48-207ENST00000375642 ZFYVE9O95405 1425 aa25.64■■□□□ 1.7
C6orf48-207ENST00000375642 BCANQ96GW7 911 aa25.62■■□□□ 1.69
C6orf48-207ENST00000375642 MYO5BQ9ULV0 1848 aa25.62■■□□□ 1.69
C6orf48-207ENST00000375642 NUTM2DQ5VT03 806 aaPredicted RBP25.61■■□□□ 1.69
C6orf48-207ENST00000375642 ANKRD30BQ9BXX2 1392 aa25.59■■□□□ 1.69
C6orf48-207ENST00000375642 IQGAP1P46940 1657 aa25.59■■□□□ 1.69
C6orf48-207ENST00000375642 KIF1BO60333 1816 aa25.57■■□□□ 1.68
C6orf48-207ENST00000375642 PLEKHG1Q9ULL1 1385 aa25.56■■□□□ 1.68
C6orf48-207ENST00000375642 SENP3Q9H4L4 574 aaPredicted RBP25.56■■□□□ 1.68
C6orf48-207ENST00000375642 RPGRIP1LQ68CZ1 1315 aa25.56■■□□□ 1.68
C6orf48-207ENST00000375642 SLC26A8Q96RN1 970 aa25.55■■□□□ 1.68
C6orf48-207ENST00000375642 RGL3Q3MIN7 710 aa25.54■■□□□ 1.68
C6orf48-207ENST00000375642 SPATA31E1Q6ZUB1 1445 aa25.52■■□□□ 1.68
C6orf48-207ENST00000375642 VGFO15240 615 aaPredicted RBP25.51■■□□□ 1.67
C6orf48-207ENST00000375642 PCGF6Q9BYE7 350 aa25.51■■□□□ 1.67
C6orf48-207ENST00000375642 NEXMIFQ5QGS0 1516 aa25.49■■□□□ 1.67
C6orf48-207ENST00000375642 TBX22Q9Y458 520 aa25.48■■□□□ 1.67
C6orf48-207ENST00000375642 ADAMTS13Q76LX8 1427 aa25.43■■□□□ 1.66
C6orf48-207ENST00000375642 DHX57Q6P158 1386 aaKnown RBP25.43■■□□□ 1.66
C6orf48-207ENST00000375642 ALKQ9UM73 1620 aa25.42■■□□□ 1.66
C6orf48-207ENST00000375642 KCNA6P17658 529 aa25.42■■□□□ 1.66
C6orf48-207ENST00000375642 SETBP1Q9Y6X0 1596 aa25.39■■□□□ 1.65
C6orf48-207ENST00000375642 ADGRF5Q8IZF2 1346 aa25.37■■□□□ 1.65
C6orf48-207ENST00000375642 DIP2AQ14689 1571 aa25.37■■□□□ 1.65
C6orf48-207ENST00000375642 LRRC7Q96NW7 1537 aa25.37■■□□□ 1.65
C6orf48-207ENST00000375642 PPLO60437 1756 aa25.36■■□□□ 1.65
C6orf48-207ENST00000375642 PIK3R4Q99570 1358 aa25.36■■□□□ 1.65
C6orf48-207ENST00000375642 NRXN3Q9Y4C0 1643 aa25.33■■□□□ 1.65
C6orf48-207ENST00000375642 STRCP1A6NGW2 1772 aa25.32■■□□□ 1.64
C6orf48-207ENST00000375642 DCAF11Q8TEB1 546 aa25.32■■□□□ 1.64
C6orf48-207ENST00000375642 METP08581 1390 aa25.31■■□□□ 1.64
C6orf48-207ENST00000375642 PROSER2Q86WR7 435 aaPredicted RBP25.31■■□□□ 1.64
C6orf48-207ENST00000375642 SIN3AQ96ST3 1273 aa25.31■■□□□ 1.64
C6orf48-207ENST00000375642 STAC3Q96MF2 364 aa25.3■■□□□ 1.64
C6orf48-207ENST00000375642 AMOTL2Q9Y2J4 779 aa25.3■■□□□ 1.64
C6orf48-207ENST00000375642 KDM2AQ9Y2K7 1162 aa25.3■■□□□ 1.64
C6orf48-207ENST00000375642 NEUROD1Q13562 356 aa25.29■■□□□ 1.64
C6orf48-207ENST00000375642 IFT172Q9UG01 1749 aa25.29■■□□□ 1.64
C6orf48-207ENST00000375642 MYOM2P54296 1465 aa25.28■■□□□ 1.64
C6orf48-207ENST00000375642 NKTRP30414 1462 aaKnown RBP25.28■■□□□ 1.64
C6orf48-207ENST00000375642 NWD1Q149M9 1564 aa25.27■■□□□ 1.64
C6orf48-207ENST00000375642 PIK3C2GO75747 1445 aa25.27■■□□□ 1.64
C6orf48-207ENST00000375642 PTPRUQ92729 1446 aa25.27■■□□□ 1.64
C6orf48-207ENST00000375642 CHD2O14647 1828 aaKnown RBP25.26■■□□□ 1.63
C6orf48-207ENST00000375642 TMEM94Q12767 1356 aa25.25■■□□□ 1.63
C6orf48-207ENST00000375642 NRXN1Q9ULB1 1477 aa25.24■■□□□ 1.63
C6orf48-207ENST00000375642 RBM33Q96EV2 1170 aaKnown RBP25.24■■□□□ 1.63
C6orf48-207ENST00000375642 C14orf93Q9H972 538 aaKnown RBP25.23■■□□□ 1.63
C6orf48-207ENST00000375642 CFAP70Q5T0N1 1121 aa25.21■■□□□ 1.63
C6orf48-207ENST00000375642 TMEM132EQ6IEE7 984 aa25.19■■□□□ 1.62
C6orf48-207ENST00000375642 L3MBTL2Q969R5 705 aa25.19■■□□□ 1.62
C6orf48-207ENST00000375642 RGS17Q9UGC6 210 aaPredicted RBP25.19■■□□□ 1.62
C6orf48-207ENST00000375642 C14orf37Q86TY3 774 aa25.17■■□□□ 1.62
C6orf48-207ENST00000375642 SETD1AO15047 1707 aaKnown RBP25.17■■□□□ 1.62
C6orf48-207ENST00000375642 XRN1Q8IZH2 1706 aaKnown RBP25.15■■□□□ 1.62
C6orf48-207ENST00000375642 NCOA3Q9Y6Q9 1424 aa25.15■■□□□ 1.62
C6orf48-207ENST00000375642 STK26Q9P289 416 aa25.15■■□□□ 1.62
C6orf48-207ENST00000375642 LRPPRCP42704 1394 aaKnown RBP25.13■■□□□ 1.61
C6orf48-207ENST00000375642 MSH6P52701 1360 aa25.13■■□□□ 1.61
C6orf48-207ENST00000375642 FAM135BQ49AJ0 1406 aa25.12■■□□□ 1.61
C6orf48-207ENST00000375642 ROBO2Q9HCK4 1378 aa25.11■■□□□ 1.61
C6orf48-207ENST00000375642 C19orf44Q9H6X5 657 aa25.11■■□□□ 1.61
C6orf48-207ENST00000375642 PTCH1Q13635 1447 aa25.11■■□□□ 1.61
C6orf48-207ENST00000375642 XIRP1Q702N8 1843 aaKnown RBP25.1■■□□□ 1.61
C6orf48-207ENST00000375642 ABCC11Q96J66 1382 aa25.1■■□□□ 1.61
C6orf48-207ENST00000375642 LAMC1P11047 1609 aa25.1■■□□□ 1.61
C6orf48-207ENST00000375642 PRAG1Q86YV5 1406 aa25.1■■□□□ 1.61
C6orf48-207ENST00000375642 YTHDC2Q9H6S0 1430 aaKnown RBP25.1■■□□□ 1.61
C6orf48-207ENST00000375642 TONSLQ96HA7 1378 aa25.09■■□□□ 1.61
C6orf48-207ENST00000375642 ASXL1Q8IXJ9 1541 aa25.09■■□□□ 1.61
C6orf48-207ENST00000375642 CCER1Q8TC90 406 aaPredicted RBP25.08■■□□□ 1.61
C6orf48-207ENST00000375642 CLSPNQ9HAW4 1339 aa25.08■■□□□ 1.6
C6orf48-207ENST00000375642 TECPR2O15040 1411 aa25.06■■□□□ 1.6
C6orf48-207ENST00000375642 ATF3P18847 181 aa25.06■■□□□ 1.6
C6orf48-207ENST00000375642 POTEAQ6S8J7 498 aa25.05■■□□□ 1.6
C6orf48-207ENST00000375642 CADPS2Q86UW7 1296 aa25.04■■□□□ 1.6
C6orf48-207ENST00000375642 SIRT1Q96EB6 747 aa25.04■■□□□ 1.6
C6orf48-207ENST00000375642 WAPLQ7Z5K2 1190 aa25.03■■□□□ 1.6
C6orf48-207ENST00000375642 ADGRB1O14514 1584 aa25.02■■□□□ 1.6
C6orf48-207ENST00000375642 ROBO1Q9Y6N7 1651 aa25.02■■□□□ 1.6
C6orf48-207ENST00000375642 SLAIN2Q9P270 581 aa25.01■■□□□ 1.59
C6orf48-207ENST00000375642 TRAK1Q9UPV9 953 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms