RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 CERKQ8TCT0 537 aa23.73■■□□□ 1.39
C11orf88-202ENST00000375618 SENP3Q9H4L4 574 aaPredicted RBP23.72■■□□□ 1.39
C11orf88-202ENST00000375618 ACIN1Q9UKV3 1341 aaKnown RBP23.71■■□□□ 1.39
C11orf88-202ENST00000375618 STRCP1A6NGW2 1772 aa23.7■■□□□ 1.38
C11orf88-202ENST00000375618 PLEKHG1Q9ULL1 1385 aa23.68■■□□□ 1.38
C11orf88-202ENST00000375618 KIF1BO60333 1816 aa23.68■■□□□ 1.38
C11orf88-202ENST00000375618 SLC26A8Q96RN1 970 aa23.67■■□□□ 1.38
C11orf88-202ENST00000375618 NEXMIFQ5QGS0 1516 aa23.67■■□□□ 1.38
C11orf88-202ENST00000375618 CCDC144AA2RUR9 1427 aa23.65■■□□□ 1.38
C11orf88-202ENST00000375618 PPP1R15AO75807 674 aaPredicted RBP23.64■■□□□ 1.37
C11orf88-202ENST00000375618 ZNF326Q5BKZ1 582 aaKnown RBP23.64■■□□□ 1.37
C11orf88-202ENST00000375618 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.64■■□□□ 1.37
C11orf88-202ENST00000375618 SPATA31E1Q6ZUB1 1445 aa23.63■■□□□ 1.37
C11orf88-202ENST00000375618 ADAMTS13Q76LX8 1427 aa23.63■■□□□ 1.37
C11orf88-202ENST00000375618 TRIM26Q12899 539 aaPredicted RBP23.62■■□□□ 1.37
C11orf88-202ENST00000375618 ANKRD30BQ9BXX2 1392 aa23.62■■□□□ 1.37
C11orf88-202ENST00000375618 HDGFP51858 240 aaKnown RBP23.61■■□□□ 1.37
C11orf88-202ENST00000375618 NRXN3Q9Y4C0 1643 aa23.61■■□□□ 1.37
C11orf88-202ENST00000375618 CPS1P31327 1500 aa23.6■■□□□ 1.37
C11orf88-202ENST00000375618 ILDR1Q86SU0 546 aaPredicted RBP23.6■■□□□ 1.37
C11orf88-202ENST00000375618 BCANQ96GW7 911 aa23.59■■□□□ 1.37
C11orf88-202ENST00000375618 SETBP1Q9Y6X0 1596 aa23.57■■□□□ 1.36
C11orf88-202ENST00000375618 PPLO60437 1756 aa23.56■■□□□ 1.36
C11orf88-202ENST00000375618 LRRC7Q96NW7 1537 aa23.56■■□□□ 1.36
C11orf88-202ENST00000375618 FBXO41Q8TF61 875 aa23.56■■□□□ 1.36
C11orf88-202ENST00000375618 IQSEC2Q5JU85 1478 aa23.56■■□□□ 1.36
C11orf88-202ENST00000375618 RGL3Q3MIN7 710 aa23.55■■□□□ 1.36
C11orf88-202ENST00000375618 NWD1Q149M9 1564 aa23.54■■□□□ 1.36
C11orf88-202ENST00000375618 TBX22Q9Y458 520 aa23.54■■□□□ 1.36
C11orf88-202ENST00000375618 RPGRIP1LQ68CZ1 1315 aa23.53■■□□□ 1.36
C11orf88-202ENST00000375618 DIP2AQ14689 1571 aa23.52■■□□□ 1.36
C11orf88-202ENST00000375618 KCNA6P17658 529 aa23.52■■□□□ 1.36
C11orf88-202ENST00000375618 IFT172Q9UG01 1749 aa23.52■■□□□ 1.36
C11orf88-202ENST00000375618 PTPRUQ92729 1446 aa23.5■■□□□ 1.35
C11orf88-202ENST00000375618 CHD2O14647 1828 aaKnown RBP23.5■■□□□ 1.35
C11orf88-202ENST00000375618 ADGRF5Q8IZF2 1346 aa23.49■■□□□ 1.35
C11orf88-202ENST00000375618 XIRP1Q702N8 1843 aaKnown RBP23.49■■□□□ 1.35
C11orf88-202ENST00000375618 METP08581 1390 aa23.48■■□□□ 1.35
C11orf88-202ENST00000375618 VGFO15240 615 aaPredicted RBP23.47■■□□□ 1.35
C11orf88-202ENST00000375618 RBM33Q96EV2 1170 aaKnown RBP23.47■■□□□ 1.35
C11orf88-202ENST00000375618 SETD1AO15047 1707 aaKnown RBP23.47■■□□□ 1.35
C11orf88-202ENST00000375618 ALKQ9UM73 1620 aa23.46■■□□□ 1.35
C11orf88-202ENST00000375618 NKTRP30414 1462 aaKnown RBP23.45■■□□□ 1.34
C11orf88-202ENST00000375618 TMEM94Q12767 1356 aa23.44■■□□□ 1.34
C11orf88-202ENST00000375618 PIK3R4Q99570 1358 aa23.44■■□□□ 1.34
C11orf88-202ENST00000375618 DHX57Q6P158 1386 aaKnown RBP23.43■■□□□ 1.34
C11orf88-202ENST00000375618 XRN1Q8IZH2 1706 aaKnown RBP23.42■■□□□ 1.34
C11orf88-202ENST00000375618 UBAP1LF5GYI3 381 aa23.41■■□□□ 1.34
C11orf88-202ENST00000375618 PROSER2Q86WR7 435 aaPredicted RBP23.41■■□□□ 1.34
C11orf88-202ENST00000375618 AMOTL2Q9Y2J4 779 aa23.4■■□□□ 1.34
C11orf88-202ENST00000375618 NRXN1Q9ULB1 1477 aa23.39■■□□□ 1.34
C11orf88-202ENST00000375618 PIK3C2GO75747 1445 aa23.39■■□□□ 1.33
C11orf88-202ENST00000375618 MYOM2P54296 1465 aa23.38■■□□□ 1.33
C11orf88-202ENST00000375618 ASXL1Q8IXJ9 1541 aa23.37■■□□□ 1.33
C11orf88-202ENST00000375618 SIN3AQ96ST3 1273 aa23.33■■□□□ 1.33
C11orf88-202ENST00000375618 DCAF11Q8TEB1 546 aa23.31■■□□□ 1.32
C11orf88-202ENST00000375618 PCGF6Q9BYE7 350 aa23.31■■□□□ 1.32
C11orf88-202ENST00000375618 KDM2AQ9Y2K7 1162 aa23.31■■□□□ 1.32
C11orf88-202ENST00000375618 ROBO2Q9HCK4 1378 aa23.29■■□□□ 1.32
C11orf88-202ENST00000375618 TOM1O60784 492 aa23.29■■□□□ 1.32
C11orf88-202ENST00000375618 PIP4K2BP78356 416 aa23.29■■□□□ 1.32
C11orf88-202ENST00000375618 CFAP70Q5T0N1 1121 aa23.29■■□□□ 1.32
C11orf88-202ENST00000375618 TMEM132EQ6IEE7 984 aa23.29■■□□□ 1.32
C11orf88-202ENST00000375618 C14orf93Q9H972 538 aaKnown RBP23.29■■□□□ 1.32
C11orf88-202ENST00000375618 PRAG1Q86YV5 1406 aa23.28■■□□□ 1.32
C11orf88-202ENST00000375618 NCOA3Q9Y6Q9 1424 aa23.26■■□□□ 1.31
C11orf88-202ENST00000375618 PTCH1Q13635 1447 aa23.25■■□□□ 1.31
C11orf88-202ENST00000375618 MSH6P52701 1360 aa23.25■■□□□ 1.31
C11orf88-202ENST00000375618 SCAF1Q9H7N4 1312 aaKnown RBP23.24■■□□□ 1.31
C11orf88-202ENST00000375618 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.24■■□□□ 1.31
C11orf88-202ENST00000375618 LRPPRCP42704 1394 aaKnown RBP23.24■■□□□ 1.31
C11orf88-202ENST00000375618 LAMC1P11047 1609 aa23.23■■□□□ 1.31
C11orf88-202ENST00000375618 NEUROD1Q13562 356 aa23.23■■□□□ 1.31
C11orf88-202ENST00000375618 STK26Q9P289 416 aa23.23■■□□□ 1.31
C11orf88-202ENST00000375618 ADGRB1O14514 1584 aa23.23■■□□□ 1.31
C11orf88-202ENST00000375618 TECPR2O15040 1411 aa23.22■■□□□ 1.31
C11orf88-202ENST00000375618 NALCNQ8IZF0 1738 aa23.22■■□□□ 1.31
C11orf88-202ENST00000375618 C14orf37Q86TY3 774 aa23.21■■□□□ 1.31
C11orf88-202ENST00000375618 YTHDC2Q9H6S0 1430 aaKnown RBP23.21■■□□□ 1.31
C11orf88-202ENST00000375618 ABCC11Q96J66 1382 aa23.2■■□□□ 1.3
C11orf88-202ENST00000375618 L3MBTL2Q969R5 705 aa23.2■■□□□ 1.3
C11orf88-202ENST00000375618 C19orf44Q9H6X5 657 aa23.2■■□□□ 1.3
C11orf88-202ENST00000375618 KNDC1Q76NI1 1749 aa23.19■■□□□ 1.3
C11orf88-202ENST00000375618 ADGRL3Q9HAR2 1447 aa23.18■■□□□ 1.3
C11orf88-202ENST00000375618 PLEKHH1Q9ULM0 1364 aa23.18■■□□□ 1.3
C11orf88-202ENST00000375618 STAC3Q96MF2 364 aa23.18■■□□□ 1.3
C11orf88-202ENST00000375618 HSPA1LP34931 641 aa23.17■■□□□ 1.3
C11orf88-202ENST00000375618 WAPLQ7Z5K2 1190 aa23.17■■□□□ 1.3
C11orf88-202ENST00000375618 SLAIN2Q9P270 581 aa23.15■■□□□ 1.3
C11orf88-202ENST00000375618 ROBO1Q9Y6N7 1651 aa23.14■■□□□ 1.29
C11orf88-202ENST00000375618 DCCP43146 1447 aa23.14■■□□□ 1.29
C11orf88-202ENST00000375618 FAM135BQ49AJ0 1406 aa23.14■■□□□ 1.29
C11orf88-202ENST00000375618 CADPS2Q86UW7 1296 aa23.12■■□□□ 1.29
C11orf88-202ENST00000375618 MST1RQ04912 1400 aa23.11■■□□□ 1.29
C11orf88-202ENST00000375618 ATF3P18847 181 aa23.11■■□□□ 1.29
C11orf88-202ENST00000375618 DLC1Q96QB1 1528 aa23.09■■□□□ 1.29
C11orf88-202ENST00000375618 NBPF1Q3BBV0 1214 aa23.09■■□□□ 1.29
C11orf88-202ENST00000375618 KIAA1210Q9ULL0 1709 aa23.08■■□□□ 1.29
C11orf88-202ENST00000375618 SIRT1Q96EB6 747 aa23.08■■□□□ 1.29
C11orf88-202ENST00000375618 PRAM1Q96QH2 718 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms