RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 ZNF335Q9H4Z2 1342 aaPredicted RBP17.85■□□□□ 0.45
HDAC8-201ENST00000373554 ZFYVE9O95405 1425 aa17.84■□□□□ 0.45
HDAC8-201ENST00000373554 CERKQ8TCT0 537 aa17.84■□□□□ 0.45
HDAC8-201ENST00000373554 RIMS2Q9UQ26 1411 aa17.83■□□□□ 0.45
HDAC8-201ENST00000373554 HDGFP51858 240 aaKnown RBP17.83■□□□□ 0.44
HDAC8-201ENST00000373554 PPP1R15AO75807 674 aaPredicted RBP17.82■□□□□ 0.44
HDAC8-201ENST00000373554 FOXD1Q16676 465 aa17.8■□□□□ 0.44
HDAC8-201ENST00000373554 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.8■□□□□ 0.44
HDAC8-201ENST00000373554 KIF1BO60333 1816 aa17.79■□□□□ 0.44
HDAC8-201ENST00000373554 CPS1P31327 1500 aa17.79■□□□□ 0.44
HDAC8-201ENST00000373554 PLEKHG1Q9ULL1 1385 aa17.79■□□□□ 0.44
HDAC8-201ENST00000373554 IQSEC2Q5JU85 1478 aa17.78■□□□□ 0.44
HDAC8-201ENST00000373554 HRCP23327 699 aa17.78■□□□□ 0.44
HDAC8-201ENST00000373554 ZNF326Q5BKZ1 582 aaKnown RBP17.78■□□□□ 0.44
HDAC8-201ENST00000373554 CCDC144AA2RUR9 1427 aa17.78■□□□□ 0.44
HDAC8-201ENST00000373554 BCANQ96GW7 911 aa17.77■□□□□ 0.44
HDAC8-201ENST00000373554 NUTM2DQ5VT03 806 aaPredicted RBP17.74■□□□□ 0.43
HDAC8-201ENST00000373554 SLC26A8Q96RN1 970 aa17.74■□□□□ 0.43
HDAC8-201ENST00000373554 NEXMIFQ5QGS0 1516 aa17.73■□□□□ 0.43
HDAC8-201ENST00000373554 DIP2AQ14689 1571 aa17.72■□□□□ 0.43
HDAC8-201ENST00000373554 SENP3Q9H4L4 574 aaPredicted RBP17.72■□□□□ 0.43
HDAC8-201ENST00000373554 STRCP1A6NGW2 1772 aa17.7■□□□□ 0.42
HDAC8-201ENST00000373554 SETBP1Q9Y6X0 1596 aa17.69■□□□□ 0.42
HDAC8-201ENST00000373554 NWD1Q149M9 1564 aa17.68■□□□□ 0.42
HDAC8-201ENST00000373554 ADAMTS13Q76LX8 1427 aa17.68■□□□□ 0.42
HDAC8-201ENST00000373554 RPGRIP1LQ68CZ1 1315 aa17.68■□□□□ 0.42
HDAC8-201ENST00000373554 SPATA31E1Q6ZUB1 1445 aa17.67■□□□□ 0.42
HDAC8-201ENST00000373554 TRIM26Q12899 539 aaPredicted RBP17.67■□□□□ 0.42
HDAC8-201ENST00000373554 TBX22Q9Y458 520 aa17.67■□□□□ 0.42
HDAC8-201ENST00000373554 LRRC7Q96NW7 1537 aa17.67■□□□□ 0.42
HDAC8-201ENST00000373554 VGFO15240 615 aaPredicted RBP17.66■□□□□ 0.42
HDAC8-201ENST00000373554 KCNA6P17658 529 aa17.66■□□□□ 0.42
HDAC8-201ENST00000373554 NKTRP30414 1462 aaKnown RBP17.66■□□□□ 0.42
HDAC8-201ENST00000373554 PPLO60437 1756 aa17.66■□□□□ 0.42
HDAC8-201ENST00000373554 NRXN3Q9Y4C0 1643 aa17.65■□□□□ 0.42
HDAC8-201ENST00000373554 PIK3R4Q99570 1358 aa17.65■□□□□ 0.42
HDAC8-201ENST00000373554 ANKRD30BQ9BXX2 1392 aa17.65■□□□□ 0.42
HDAC8-201ENST00000373554 RGL3Q3MIN7 710 aa17.63■□□□□ 0.41
HDAC8-201ENST00000373554 CHD2O14647 1828 aaKnown RBP17.62■□□□□ 0.41
HDAC8-201ENST00000373554 IFT172Q9UG01 1749 aa17.61■□□□□ 0.41
HDAC8-201ENST00000373554 UBAP1LF5GYI3 381 aa17.61■□□□□ 0.41
HDAC8-201ENST00000373554 TMEM94Q12767 1356 aa17.59■□□□□ 0.41
HDAC8-201ENST00000373554 PROSER2Q86WR7 435 aaPredicted RBP17.59■□□□□ 0.41
HDAC8-201ENST00000373554 TOM1O60784 492 aa17.58■□□□□ 0.4
HDAC8-201ENST00000373554 ALKQ9UM73 1620 aa17.57■□□□□ 0.4
HDAC8-201ENST00000373554 XIRP1Q702N8 1843 aaKnown RBP17.56■□□□□ 0.4
HDAC8-201ENST00000373554 METP08581 1390 aa17.56■□□□□ 0.4
HDAC8-201ENST00000373554 XRN1Q8IZH2 1706 aaKnown RBP17.56■□□□□ 0.4
HDAC8-201ENST00000373554 MYOM2P54296 1465 aa17.56■□□□□ 0.4
HDAC8-201ENST00000373554 PTPRUQ92729 1446 aa17.55■□□□□ 0.4
HDAC8-201ENST00000373554 ADGRF5Q8IZF2 1346 aa17.55■□□□□ 0.4
HDAC8-201ENST00000373554 AMOTL2Q9Y2J4 779 aa17.55■□□□□ 0.4
HDAC8-201ENST00000373554 SETD1AO15047 1707 aaKnown RBP17.55■□□□□ 0.4
HDAC8-201ENST00000373554 PIK3C2GO75747 1445 aa17.54■□□□□ 0.4
HDAC8-201ENST00000373554 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
HDAC8-201ENST00000373554 RBM33Q96EV2 1170 aaKnown RBP17.53■□□□□ 0.4
HDAC8-201ENST00000373554 NCOA3Q9Y6Q9 1424 aa17.52■□□□□ 0.4
HDAC8-201ENST00000373554 MSH6P52701 1360 aa17.52■□□□□ 0.39
HDAC8-201ENST00000373554 PIP4K2BP78356 416 aa17.51■□□□□ 0.39
HDAC8-201ENST00000373554 C14orf37Q86TY3 774 aa17.51■□□□□ 0.39
HDAC8-201ENST00000373554 NRXN1Q9ULB1 1477 aa17.5■□□□□ 0.39
HDAC8-201ENST00000373554 LAMC1P11047 1609 aa17.5■□□□□ 0.39
HDAC8-201ENST00000373554 PTCH1Q13635 1447 aa17.48■□□□□ 0.39
HDAC8-201ENST00000373554 DHX57Q6P158 1386 aaKnown RBP17.48■□□□□ 0.39
HDAC8-201ENST00000373554 PRAG1Q86YV5 1406 aa17.47■□□□□ 0.39
HDAC8-201ENST00000373554 STAC3Q96MF2 364 aa17.47■□□□□ 0.39
HDAC8-201ENST00000373554 DCAF11Q8TEB1 546 aa17.46■□□□□ 0.39
HDAC8-201ENST00000373554 ASXL1Q8IXJ9 1541 aa17.45■□□□□ 0.38
HDAC8-201ENST00000373554 KDM2AQ9Y2K7 1162 aa17.44■□□□□ 0.38
HDAC8-201ENST00000373554 C19orf44Q9H6X5 657 aa17.43■□□□□ 0.38
HDAC8-201ENST00000373554 C14orf93Q9H972 538 aaKnown RBP17.43■□□□□ 0.38
HDAC8-201ENST00000373554 DCCP43146 1447 aa17.43■□□□□ 0.38
HDAC8-201ENST00000373554 ADGRL3Q9HAR2 1447 aa17.43■□□□□ 0.38
HDAC8-201ENST00000373554 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.43■□□□□ 0.38
HDAC8-201ENST00000373554 LRPPRCP42704 1394 aaKnown RBP17.42■□□□□ 0.38
HDAC8-201ENST00000373554 ROBO2Q9HCK4 1378 aa17.42■□□□□ 0.38
HDAC8-201ENST00000373554 ATF3P18847 181 aa17.42■□□□□ 0.38
HDAC8-201ENST00000373554 CADPS2Q86UW7 1296 aa17.42■□□□□ 0.38
HDAC8-201ENST00000373554 KNDC1Q76NI1 1749 aa17.41■□□□□ 0.38
HDAC8-201ENST00000373554 TECPR2O15040 1411 aa17.41■□□□□ 0.38
HDAC8-201ENST00000373554 YTHDC2Q9H6S0 1430 aaKnown RBP17.41■□□□□ 0.38
HDAC8-201ENST00000373554 CFAP70Q5T0N1 1121 aa17.41■□□□□ 0.38
HDAC8-201ENST00000373554 TMEM132EQ6IEE7 984 aa17.41■□□□□ 0.38
HDAC8-201ENST00000373554 NALCNQ8IZF0 1738 aa17.41■□□□□ 0.38
HDAC8-201ENST00000373554 STK26Q9P289 416 aa17.4■□□□□ 0.38
HDAC8-201ENST00000373554 ABCC11Q96J66 1382 aa17.4■□□□□ 0.38
HDAC8-201ENST00000373554 FAM135BQ49AJ0 1406 aa17.39■□□□□ 0.38
HDAC8-201ENST00000373554 SLAIN2Q9P270 581 aa17.39■□□□□ 0.37
HDAC8-201ENST00000373554 ROBO1Q9Y6N7 1651 aa17.39■□□□□ 0.37
HDAC8-201ENST00000373554 HSPA1LP34931 641 aa17.38■□□□□ 0.37
HDAC8-201ENST00000373554 SIN3AQ96ST3 1273 aa17.38■□□□□ 0.37
HDAC8-201ENST00000373554 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
HDAC8-201ENST00000373554 NEUROD1Q13562 356 aa17.37■□□□□ 0.37
HDAC8-201ENST00000373554 ADGRB1O14514 1584 aa17.36■□□□□ 0.37
HDAC8-201ENST00000373554 KIAA1210Q9ULL0 1709 aa17.33■□□□□ 0.37
HDAC8-201ENST00000373554 CDC42BPGQ6DT37 1551 aa17.33■□□□□ 0.37
HDAC8-201ENST00000373554 DLC1Q96QB1 1528 aa17.33■□□□□ 0.37
HDAC8-201ENST00000373554 MST1RQ04912 1400 aa17.33■□□□□ 0.36
HDAC8-201ENST00000373554 L3MBTL2Q969R5 705 aa17.32■□□□□ 0.36
HDAC8-201ENST00000373554 SIRT1Q96EB6 747 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms