RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 CCDC141Q6ZP82 1450 aa22.85■■□□□ 1.25
VPS26A-202ENST00000373382 CDC42BPAQ5VT25 1732 aa22.85■■□□□ 1.25
VPS26A-202ENST00000373382 TRPM1Q7Z4N2 1603 aa22.85■■□□□ 1.25
VPS26A-202ENST00000373382 ZNF521Q96K83 1311 aa22.84■■□□□ 1.25
VPS26A-202ENST00000373382 BECN1Q14457 450 aa22.84■■□□□ 1.25
VPS26A-202ENST00000373382 CDCA8Q53HL2 280 aa22.84■■□□□ 1.25
VPS26A-202ENST00000373382 CENPJQ9HC77 1338 aaPredicted RBP22.83■■□□□ 1.25
VPS26A-202ENST00000373382 GZF1Q9H116 711 aaPredicted RBP22.83■■□□□ 1.24
VPS26A-202ENST00000373382 E9PSI1 815 aa22.82■■□□□ 1.24
VPS26A-202ENST00000373382 RSPH4AQ5TD94 716 aa22.82■■□□□ 1.24
VPS26A-202ENST00000373382 TNNQ9UQP3 1299 aa22.81■■□□□ 1.24
VPS26A-202ENST00000373382 UPF2Q9HAU5 1272 aaKnown RBP22.8■■□□□ 1.24
VPS26A-202ENST00000373382 EIF4G3O43432 1585 aaKnown RBP22.78■■□□□ 1.24
VPS26A-202ENST00000373382 ERCC6Q03468 1493 aa22.77■■□□□ 1.24
VPS26A-202ENST00000373382 USP19O94966 1318 aa22.76■■□□□ 1.23
VPS26A-202ENST00000373382 NKTRP30414 1462 aaKnown RBP22.76■■□□□ 1.23
VPS26A-202ENST00000373382 WDR7Q9Y4E6 1490 aa22.76■■□□□ 1.23
VPS26A-202ENST00000373382 ADCY10Q96PN6 1610 aa22.76■■□□□ 1.23
VPS26A-202ENST00000373382 CGNL1Q0VF96 1302 aa22.76■■□□□ 1.23
VPS26A-202ENST00000373382 SYNJ2O15056 1496 aa22.75■■□□□ 1.23
VPS26A-202ENST00000373382 ARHGAP5Q13017 1502 aa22.75■■□□□ 1.23
VPS26A-202ENST00000373382 SYCP2Q9BX26 1530 aa22.75■■□□□ 1.23
VPS26A-202ENST00000373382 SENP3Q9H4L4 574 aaPredicted RBP22.75■■□□□ 1.23
VPS26A-202ENST00000373382 PRDM15P57071 1507 aaPredicted RBP22.75■■□□□ 1.23
VPS26A-202ENST00000373382 CFAP70Q5T0N1 1121 aa22.74■■□□□ 1.23
VPS26A-202ENST00000373382 INSRP06213 1382 aa22.74■■□□□ 1.23
VPS26A-202ENST00000373382 CHGAP10645 457 aaKnown RBP22.74■■□□□ 1.23
VPS26A-202ENST00000373382 WWC1Q8IX03 1113 aa22.72■■□□□ 1.23
VPS26A-202ENST00000373382 EIF3AQ14152 1382 aaKnown RBP22.72■■□□□ 1.23
VPS26A-202ENST00000373382 TRMT2AQ8IZ69 625 aaKnown RBP22.72■■□□□ 1.23
VPS26A-202ENST00000373382 MAPK8IP3Q9UPT6 1336 aa22.72■■□□□ 1.23
VPS26A-202ENST00000373382 PCDHB15Q9Y5E8 787 aa22.7■■□□□ 1.23
VPS26A-202ENST00000373382 RLBP1P12271 317 aa22.7■■□□□ 1.22
VPS26A-202ENST00000373382 CARD14Q9BXL6 1004 aa22.7■■□□□ 1.22
VPS26A-202ENST00000373382 PDZRN3Q9UPQ7 1066 aa22.7■■□□□ 1.22
VPS26A-202ENST00000373382 SAMD9LQ8IVG5 1584 aa22.69■■□□□ 1.22
VPS26A-202ENST00000373382 PDE3AQ14432 1141 aa22.69■■□□□ 1.22
VPS26A-202ENST00000373382 MORC1Q86VD1 984 aa22.69■■□□□ 1.22
VPS26A-202ENST00000373382 FAM43AQ8N2R8 423 aa22.68■■□□□ 1.22
VPS26A-202ENST00000373382 ABCA8O94911 1581 aa22.68■■□□□ 1.22
VPS26A-202ENST00000373382 MFAP1P55081 439 aaKnown RBP22.67■■□□□ 1.22
VPS26A-202ENST00000373382 AFAP1Q8N556 730 aa22.67■■□□□ 1.22
VPS26A-202ENST00000373382 TBC1D2Q9BYX2 928 aa22.66■■□□□ 1.22
VPS26A-202ENST00000373382 ASXL1Q8IXJ9 1541 aa22.66■■□□□ 1.22
VPS26A-202ENST00000373382 TCP11L2Q8N4U5 519 aa22.65■■□□□ 1.22
VPS26A-202ENST00000373382 RARSP54136 660 aaKnown RBP22.64■■□□□ 1.21
VPS26A-202ENST00000373382 PMFBP1Q8TBY8 1022 aa22.64■■□□□ 1.21
VPS26A-202ENST00000373382 RRAGDQ9NQL2 400 aaPredicted RBP22.63■■□□□ 1.21
VPS26A-202ENST00000373382 ARHGEF5Q12774 1597 aa22.63■■□□□ 1.21
VPS26A-202ENST00000373382 FTSJ3Q8IY81 847 aaKnown RBP22.62■■□□□ 1.21
VPS26A-202ENST00000373382 TRAK1Q9UPV9 953 aa22.62■■□□□ 1.21
VPS26A-202ENST00000373382 PIK3C2GO75747 1445 aa22.62■■□□□ 1.21
VPS26A-202ENST00000373382 RSPH6AQ9H0K4 717 aa22.61■■□□□ 1.21
VPS26A-202ENST00000373382 NUP160Q12769 1436 aa22.61■■□□□ 1.21
VPS26A-202ENST00000373382 L1TD1Q5T7N2 865 aaKnown RBP22.61■■□□□ 1.21
VPS26A-202ENST00000373382 SLC12A5Q9H2X9 1139 aa22.61■■□□□ 1.21
VPS26A-202ENST00000373382 EFCAB2Q5VUJ9 269 aa22.6■■□□□ 1.21
VPS26A-202ENST00000373382 SCAF11Q99590 1463 aaKnown RBP22.6■■□□□ 1.21
VPS26A-202ENST00000373382 PANK2Q9BZ23 570 aa22.59■■□□□ 1.21
VPS26A-202ENST00000373382 RWDD1Q9H446 243 aaPredicted RBP22.59■■□□□ 1.21
VPS26A-202ENST00000373382 KIF3BO15066 747 aa22.59■■□□□ 1.21
VPS26A-202ENST00000373382 EIF2AK4Q9P2K8 1649 aaKnown RBP22.59■■□□□ 1.21
VPS26A-202ENST00000373382 GOLGA6L3A6NEY3 463 aa22.59■■□□□ 1.21
VPS26A-202ENST00000373382 NAP1L5Q96NT1 182 aaPredicted RBP22.59■■□□□ 1.21
VPS26A-202ENST00000373382 SPAG9O60271 1321 aaKnown RBP22.59■■□□□ 1.21
VPS26A-202ENST00000373382 TBC1D32Q96NH3 1257 aa22.58■■□□□ 1.21
VPS26A-202ENST00000373382 ADGRF5Q8IZF2 1346 aa22.57■■□□□ 1.2
VPS26A-202ENST00000373382 U2AF1L5P0DN76 240 aaPredicted RBP22.57■■□□□ 1.2
VPS26A-202ENST00000373382 U2AF1Q01081 240 aaKnown RBP eCLIP22.57■■□□□ 1.2
VPS26A-202ENST00000373382 MYO5CQ9NQX4 1742 aa22.56■■□□□ 1.2
VPS26A-202ENST00000373382 MTHFSP49914 203 aa22.56■■□□□ 1.2
VPS26A-202ENST00000373382 TSR2Q969E8 191 aaKnown RBP22.56■■□□□ 1.2
VPS26A-202ENST00000373382 RUNDC1Q96C34 613 aa22.56■■□□□ 1.2
VPS26A-202ENST00000373382 CDC42BPBQ9Y5S2 1711 aa22.55■■□□□ 1.2
VPS26A-202ENST00000373382 ANTXR1Q9H6X2 564 aa22.55■■□□□ 1.2
VPS26A-202ENST00000373382 XRCC6P12956 609 aaKnown RBP eCLIP22.54■■□□□ 1.2
VPS26A-202ENST00000373382 C22orf23Q9BZE7 217 aa22.53■■□□□ 1.2
VPS26A-202ENST00000373382 SAFB2Q14151 953 aaKnown RBP eCLIP22.53■■□□□ 1.2
VPS26A-202ENST00000373382 ITPRIPQ8IWB1 547 aa22.53■■□□□ 1.2
VPS26A-202ENST00000373382 MCM4P33991 863 aa22.52■■□□□ 1.2
VPS26A-202ENST00000373382 NUTM2DQ5VT03 806 aaPredicted RBP22.52■■□□□ 1.2
VPS26A-202ENST00000373382 TMEM132EQ6IEE7 984 aa22.52■■□□□ 1.2
VPS26A-202ENST00000373382 U2SURPO15042 1029 aaKnown RBP22.52■■□□□ 1.2
VPS26A-202ENST00000373382 SMC4Q9NTJ3 1288 aa22.51■■□□□ 1.19
VPS26A-202ENST00000373382 FOXD4L1Q9NU39 408 aa22.51■■□□□ 1.19
VPS26A-202ENST00000373382 UBE2Q2Q8WVN8 375 aa22.5■■□□□ 1.19
VPS26A-202ENST00000373382 TTC37Q6PGP7 1564 aa22.49■■□□□ 1.19
VPS26A-202ENST00000373382 TRAPPC8Q9Y2L5 1435 aa22.49■■□□□ 1.19
VPS26A-202ENST00000373382 TRAK2O60296 914 aa22.49■■□□□ 1.19
VPS26A-202ENST00000373382 CFAP53Q96M91 514 aa22.48■■□□□ 1.19
VPS26A-202ENST00000373382 NSD3Q9BZ95 1437 aa22.48■■□□□ 1.19
VPS26A-202ENST00000373382 DZIP1LQ8IYY4 767 aaKnown RBP22.48■■□□□ 1.19
VPS26A-202ENST00000373382 PREX2Q70Z35 1606 aa22.48■■□□□ 1.19
VPS26A-202ENST00000373382 ZKSCAN2Q63HK3 967 aa22.48■■□□□ 1.19
VPS26A-202ENST00000373382 LAMC1P11047 1609 aa22.47■■□□□ 1.19
VPS26A-202ENST00000373382 PNNQ9H307 717 aaKnown RBP22.47■■□□□ 1.19
VPS26A-202ENST00000373382 UNC13BO14795 1591 aa22.47■■□□□ 1.19
VPS26A-202ENST00000373382 DUOX2Q9NRD8 1548 aa22.47■■□□□ 1.19
VPS26A-202ENST00000373382 MVPQ14764 893 aaKnown RBP22.46■■□□□ 1.19
VPS26A-202ENST00000373382 HSCBQ8IWL3 235 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms