RNA–Protein interactions for RNA: ENST00000372478.4

C9orf50-201, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C9orf50, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-201ENST00000372478 ZFYVE9O95405 1425 aa37.12■■■■□ 3.53
C9orf50-201ENST00000372478 PCGF6Q9BYE7 350 aa37.11■■■■□ 3.53
C9orf50-201ENST00000372478 ZNF326Q5BKZ1 582 aaKnown RBP37.08■■■■□ 3.53
C9orf50-201ENST00000372478 NUTM2DQ5VT03 806 aaPredicted RBP37.06■■■■□ 3.52
C9orf50-201ENST00000372478 ANKRD30BQ9BXX2 1392 aa37.05■■■■□ 3.52
C9orf50-201ENST00000372478 PPP1R15AO75807 674 aaPredicted RBP37.03■■■■□ 3.52
C9orf50-201ENST00000372478 SENP3Q9H4L4 574 aaPredicted RBP37.03■■■■□ 3.52
C9orf50-201ENST00000372478 HDGFP51858 240 aaKnown RBP37.01■■■■□ 3.52
C9orf50-201ENST00000372478 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.99■■■■□ 3.51
C9orf50-201ENST00000372478 NEXMIFQ5QGS0 1516 aa36.98■■■■□ 3.51
C9orf50-201ENST00000372478 SPATA31E1Q6ZUB1 1445 aa36.96■■■■□ 3.51
C9orf50-201ENST00000372478 BCANQ96GW7 911 aa36.95■■■■□ 3.51
C9orf50-201ENST00000372478 RGL3Q3MIN7 710 aa36.94■■■■□ 3.5
C9orf50-201ENST00000372478 ZNF335Q9H4Z2 1342 aaPredicted RBP36.94■■■■□ 3.5
C9orf50-201ENST00000372478 PLEKHG1Q9ULL1 1385 aa36.93■■■■□ 3.5
C9orf50-201ENST00000372478 DHX57Q6P158 1386 aaKnown RBP36.91■■■■□ 3.5
C9orf50-201ENST00000372478 PPLO60437 1756 aa36.9■■■■□ 3.5
C9orf50-201ENST00000372478 SLC26A8Q96RN1 970 aa36.9■■■■□ 3.5
C9orf50-201ENST00000372478 RPGRIP1LQ68CZ1 1315 aa36.86■■■■□ 3.49
C9orf50-201ENST00000372478 LTBP4Q8N2S1 1624 aa36.86■■■■□ 3.49
C9orf50-201ENST00000372478 IFT172Q9UG01 1749 aa36.84■■■■□ 3.49
C9orf50-201ENST00000372478 NRXN3Q9Y4C0 1643 aa36.81■■■■□ 3.48
C9orf50-201ENST00000372478 ADAMTS13Q76LX8 1427 aa36.8■■■■□ 3.48
C9orf50-201ENST00000372478 STRCP1A6NGW2 1772 aa36.8■■■■□ 3.48
C9orf50-201ENST00000372478 VGFO15240 615 aaPredicted RBP36.79■■■■□ 3.48
C9orf50-201ENST00000372478 SETBP1Q9Y6X0 1596 aa36.78■■■■□ 3.48
C9orf50-201ENST00000372478 DIP2AQ14689 1571 aa36.74■■■■□ 3.47
C9orf50-201ENST00000372478 TBX22Q9Y458 520 aa36.74■■■■□ 3.47
C9orf50-201ENST00000372478 ADGRF5Q8IZF2 1346 aa36.72■■■■□ 3.47
C9orf50-201ENST00000372478 CERKQ8TCT0 537 aa36.71■■■■□ 3.47
C9orf50-201ENST00000372478 SIN3AQ96ST3 1273 aa36.7■■■■□ 3.47
C9orf50-201ENST00000372478 CPS1P31327 1500 aa36.69■■■■□ 3.46
C9orf50-201ENST00000372478 CHD2O14647 1828 aaKnown RBP36.67■■■■□ 3.46
C9orf50-201ENST00000372478 KCNA6P17658 529 aa36.64■■■■□ 3.46
C9orf50-201ENST00000372478 SETD1AO15047 1707 aaKnown RBP36.63■■■■□ 3.46
C9orf50-201ENST00000372478 MYOM2P54296 1465 aa36.63■■■■□ 3.45
C9orf50-201ENST00000372478 NWD1Q149M9 1564 aa36.63■■■■□ 3.45
C9orf50-201ENST00000372478 ALKQ9UM73 1620 aa36.63■■■■□ 3.45
C9orf50-201ENST00000372478 NEUROD1Q13562 356 aa36.63■■■■□ 3.45
C9orf50-201ENST00000372478 DCAF11Q8TEB1 546 aa36.62■■■■□ 3.45
C9orf50-201ENST00000372478 METP08581 1390 aa36.61■■■■□ 3.45
C9orf50-201ENST00000372478 KDM2AQ9Y2K7 1162 aa36.61■■■■□ 3.45
C9orf50-201ENST00000372478 PIK3C2GO75747 1445 aa36.59■■■■□ 3.45
C9orf50-201ENST00000372478 PIK3R4Q99570 1358 aa36.59■■■■□ 3.45
C9orf50-201ENST00000372478 LRRC7Q96NW7 1537 aa36.58■■■■□ 3.45
C9orf50-201ENST00000372478 PTPRUQ92729 1446 aa36.58■■■■□ 3.45
C9orf50-201ENST00000372478 NRXN1Q9ULB1 1477 aa36.57■■■■□ 3.44
C9orf50-201ENST00000372478 NKTRP30414 1462 aaKnown RBP36.53■■■■□ 3.44
C9orf50-201ENST00000372478 AMOTL2Q9Y2J4 779 aa36.52■■■■□ 3.44
C9orf50-201ENST00000372478 XIRP1Q702N8 1843 aaKnown RBP36.52■■■■□ 3.44
C9orf50-201ENST00000372478 IQSEC2Q5JU85 1478 aa36.51■■■■□ 3.44
C9orf50-201ENST00000372478 XRN1Q8IZH2 1706 aaKnown RBP36.51■■■■□ 3.43
C9orf50-201ENST00000372478 PROSER2Q86WR7 435 aaPredicted RBP36.5■■■■□ 3.43
C9orf50-201ENST00000372478 RBM33Q96EV2 1170 aaKnown RBP36.5■■■■□ 3.43
C9orf50-201ENST00000372478 L3MBTL2Q969R5 705 aa36.47■■■■□ 3.43
C9orf50-201ENST00000372478 CFAP70Q5T0N1 1121 aa36.46■■■■□ 3.43
C9orf50-201ENST00000372478 TMEM94Q12767 1356 aa36.46■■■■□ 3.43
C9orf50-201ENST00000372478 ASXL1Q8IXJ9 1541 aa36.45■■■■□ 3.43
C9orf50-201ENST00000372478 STAC3Q96MF2 364 aa36.45■■■■□ 3.43
C9orf50-201ENST00000372478 C14orf93Q9H972 538 aaKnown RBP36.45■■■■□ 3.43
C9orf50-201ENST00000372478 LAMC1P11047 1609 aa36.45■■■■□ 3.43
C9orf50-201ENST00000372478 TMEM132EQ6IEE7 984 aa36.43■■■■□ 3.42
C9orf50-201ENST00000372478 STK26Q9P289 416 aa36.36■■■■□ 3.41
C9orf50-201ENST00000372478 CCER1Q8TC90 406 aaPredicted RBP36.35■■■■□ 3.41
C9orf50-201ENST00000372478 PRAG1Q86YV5 1406 aa36.34■■■■□ 3.41
C9orf50-201ENST00000372478 FBXO41Q8TF61 875 aa36.34■■■■□ 3.41
C9orf50-201ENST00000372478 TONSLQ96HA7 1378 aa36.34■■■■□ 3.41
C9orf50-201ENST00000372478 UBAP1LF5GYI3 381 aa36.33■■■■□ 3.41
C9orf50-201ENST00000372478 LRPPRCP42704 1394 aaKnown RBP36.32■■■■□ 3.4
C9orf50-201ENST00000372478 ROBO2Q9HCK4 1378 aa36.32■■■■□ 3.4
C9orf50-201ENST00000372478 YTHDC2Q9H6S0 1430 aaKnown RBP36.32■■■■□ 3.4
C9orf50-201ENST00000372478 PTCH1Q13635 1447 aa36.3■■■■□ 3.4
C9orf50-201ENST00000372478 ADGRB1O14514 1584 aa36.3■■■■□ 3.4
C9orf50-201ENST00000372478 C14orf37Q86TY3 774 aa36.3■■■■□ 3.4
C9orf50-201ENST00000372478 KNDC1Q76NI1 1749 aa36.29■■■■□ 3.4
C9orf50-201ENST00000372478 CLSPNQ9HAW4 1339 aa36.29■■■■□ 3.4
C9orf50-201ENST00000372478 KIAA1210Q9ULL0 1709 aa36.27■■■■□ 3.4
C9orf50-201ENST00000372478 NCOA3Q9Y6Q9 1424 aa36.26■■■■□ 3.4
C9orf50-201ENST00000372478 MSH6P52701 1360 aa36.25■■■■□ 3.39
C9orf50-201ENST00000372478 ABCC11Q96J66 1382 aa36.25■■■■□ 3.39
C9orf50-201ENST00000372478 TECPR2O15040 1411 aa36.25■■■■□ 3.39
C9orf50-201ENST00000372478 TOM1O60784 492 aa36.23■■■■□ 3.39
C9orf50-201ENST00000372478 ILDR1Q86SU0 546 aaPredicted RBP36.23■■■■□ 3.39
C9orf50-201ENST00000372478 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.22■■■■□ 3.39
C9orf50-201ENST00000372478 NALCNQ8IZF0 1738 aa36.22■■■■□ 3.39
C9orf50-201ENST00000372478 NBPF1Q3BBV0 1214 aa36.19■■■■□ 3.38
C9orf50-201ENST00000372478 WAPLQ7Z5K2 1190 aa36.19■■■■□ 3.38
C9orf50-201ENST00000372478 TRPM1Q7Z4N2 1603 aa36.18■■■■□ 3.38
C9orf50-201ENST00000372478 PIP4K2BP78356 416 aa36.18■■■■□ 3.38
C9orf50-201ENST00000372478 C19orf44Q9H6X5 657 aa36.18■■■■□ 3.38
C9orf50-201ENST00000372478 PLEKHH1Q9ULM0 1364 aa36.17■■■■□ 3.38
C9orf50-201ENST00000372478 NBPF8Q3BBV2 869 aa36.16■■■■□ 3.38
C9orf50-201ENST00000372478 TRAK1Q9UPV9 953 aa36.16■■■■□ 3.38
C9orf50-201ENST00000372478 ADGRL3Q9HAR2 1447 aa36.16■■■■□ 3.38
C9orf50-201ENST00000372478 SCAF1Q9H7N4 1312 aaKnown RBP36.16■■■■□ 3.38
C9orf50-201ENST00000372478 DLC1Q96QB1 1528 aa36.13■■■■□ 3.37
C9orf50-201ENST00000372478 FAM135BQ49AJ0 1406 aa36.12■■■■□ 3.37
C9orf50-201ENST00000372478 ATF3P18847 181 aa36.1■■■■□ 3.37
C9orf50-201ENST00000372478 SIRT1Q96EB6 747 aa36.1■■■■□ 3.37
C9orf50-201ENST00000372478 PRAM1Q96QH2 718 aa36.1■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms