RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 SUPT6HQ7KZ85 1726 aaKnown RBP7.1□□□□□ -1.27
ATG4A-204ENST00000372246 ABCC5O15440 1437 aa7.1□□□□□ -1.27
ATG4A-204ENST00000372246 ADAMTS8Q9UP79 889 aa7.1□□□□□ -1.27
ATG4A-204ENST00000372246 HMGXB3Q12766 1538 aa7.1□□□□□ -1.27
ATG4A-204ENST00000372246 THOC2Q8NI27 1593 aaKnown RBP7.1□□□□□ -1.27
ATG4A-204ENST00000372246 CC2D2AQ9P2K1 1620 aa7.09□□□□□ -1.27
ATG4A-204ENST00000372246 BCAR3O75815 825 aa7.09□□□□□ -1.27
ATG4A-204ENST00000372246 DAPK1P53355 1430 aa7.09□□□□□ -1.27
ATG4A-204ENST00000372246 MS4A1P11836 297 aa7.08□□□□□ -1.28
ATG4A-204ENST00000372246 KIF15Q9NS87 1388 aa7.08□□□□□ -1.28
ATG4A-204ENST00000372246 PZPP20742 1482 aa7.08□□□□□ -1.28
ATG4A-204ENST00000372246 ECM2O94769 699 aaPredicted RBP7.08□□□□□ -1.28
ATG4A-204ENST00000372246 IGHDP01880 384 aa7.08□□□□□ -1.28
ATG4A-204ENST00000372246 PANK2Q9BZ23 570 aa7.08□□□□□ -1.28
ATG4A-204ENST00000372246 EHBP1L1Q8N3D4 1523 aa7.08□□□□□ -1.28
ATG4A-204ENST00000372246 TOPBP1Q92547 1522 aa7.08□□□□□ -1.28
ATG4A-204ENST00000372246 ILDR1Q86SU0 546 aaPredicted RBP7.07□□□□□ -1.28
ATG4A-204ENST00000372246 PANK3Q9H999 370 aa7.07□□□□□ -1.28
ATG4A-204ENST00000372246 PDS5BQ9NTI5 1447 aa7.07□□□□□ -1.28
ATG4A-204ENST00000372246 KDM2BQ8NHM5 1336 aa7.07□□□□□ -1.28
ATG4A-204ENST00000372246 NLRP13Q86W25 1043 aa7.07□□□□□ -1.28
ATG4A-204ENST00000372246 PDCD7Q8N8D1 485 aaKnown RBP7.07□□□□□ -1.28
ATG4A-204ENST00000372246 OCEL1Q9H607 264 aa7.07□□□□□ -1.28
ATG4A-204ENST00000372246 CABP2Q9NPB3 220 aa7.07□□□□□ -1.28
ATG4A-204ENST00000372246 GCC2Q8IWJ2 1684 aa7.07□□□□□ -1.28
ATG4A-204ENST00000372246 EPRSP07814 1512 aaKnown RBP7.07□□□□□ -1.28
ATG4A-204ENST00000372246 PLEKHH1Q9ULM0 1364 aa7.07□□□□□ -1.28
ATG4A-204ENST00000372246 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.06□□□□□ -1.28
ATG4A-204ENST00000372246 RGL2O15211 777 aa7.06□□□□□ -1.28
ATG4A-204ENST00000372246 DDRGK1Q96HY6 314 aa7.06□□□□□ -1.28
ATG4A-204ENST00000372246 ZFP91Q96JP5 570 aaPredicted RBP7.06□□□□□ -1.28
ATG4A-204ENST00000372246 TNNQ9UQP3 1299 aa7.06□□□□□ -1.28
ATG4A-204ENST00000372246 ARHGEF11O15085 1522 aa7.06□□□□□ -1.28
ATG4A-204ENST00000372246 ABCA10Q8WWZ4 1543 aa7.06□□□□□ -1.28
ATG4A-204ENST00000372246 TCOF1Q13428 1488 aaKnown RBP7.06□□□□□ -1.28
ATG4A-204ENST00000372246 BRD4O60885 1362 aaPredicted RBP7.06□□□□□ -1.28
ATG4A-204ENST00000372246 CTTNBP2Q8WZ74 1663 aa7.06□□□□□ -1.28
ATG4A-204ENST00000372246 VGFO15240 615 aaPredicted RBP7.06□□□□□ -1.28
ATG4A-204ENST00000372246 PER1O15534 1290 aaPredicted RBP7.06□□□□□ -1.28
ATG4A-204ENST00000372246 PLCG2P16885 1265 aa7.06□□□□□ -1.28
ATG4A-204ENST00000372246 FAM161AQ3B820 660 aa7.06□□□□□ -1.28
ATG4A-204ENST00000372246 CFDP1Q9UEE9 299 aaPredicted RBP7.06□□□□□ -1.28
ATG4A-204ENST00000372246 MIA2Q96PC5 1412 aa7.06□□□□□ -1.28
ATG4A-204ENST00000372246 PRG4Q92954 1404 aaPredicted RBP7.05□□□□□ -1.28
ATG4A-204ENST00000372246 ROCK2O75116 1388 aaKnown RBP7.05□□□□□ -1.28
ATG4A-204ENST00000372246 NUP155O75694 1391 aa7.05□□□□□ -1.28
ATG4A-204ENST00000372246 DISP3Q9P2K9 1392 aa7.05□□□□□ -1.28
ATG4A-204ENST00000372246 KDM5CP41229 1560 aa7.05□□□□□ -1.28
ATG4A-204ENST00000372246 USP19O94966 1318 aa7.05□□□□□ -1.28
ATG4A-204ENST00000372246 MKRN3Q13064 507 aaKnown RBP7.05□□□□□ -1.28
ATG4A-204ENST00000372246 ABCA5Q8WWZ7 1642 aa7.05□□□□□ -1.28
ATG4A-204ENST00000372246 RALBP1Q15311 655 aa7.04□□□□□ -1.28
ATG4A-204ENST00000372246 KTN1Q86UP2 1357 aaKnown RBP7.04□□□□□ -1.28
ATG4A-204ENST00000372246 MBD5Q9P267 1494 aa7.04□□□□□ -1.28
ATG4A-204ENST00000372246 GOLGA2Q08379 1002 aa7.04□□□□□ -1.28
ATG4A-204ENST00000372246 DUSP27Q5VZP5 1158 aa7.04□□□□□ -1.28
ATG4A-204ENST00000372246 PANK1Q8TE04 598 aa7.04□□□□□ -1.28
ATG4A-204ENST00000372246 BCL2L13Q9BXK5 485 aa7.04□□□□□ -1.28
ATG4A-204ENST00000372246 SAMD9Q5K651 1589 aa7.03□□□□□ -1.28
ATG4A-204ENST00000372246 NEUROD2Q15784 382 aa7.03□□□□□ -1.28
ATG4A-204ENST00000372246 KIAA1107Q9UPP5 1409 aa7.03□□□□□ -1.28
ATG4A-204ENST00000372246 HNRNPMP52272 730 aaKnown RBP eCLIP7.03□□□□□ -1.28
ATG4A-204ENST00000372246 MAMSTRQ6ZN01 415 aa7.03□□□□□ -1.28
ATG4A-204ENST00000372246 GAPVD1Q14C86 1478 aa7.03□□□□□ -1.28
ATG4A-204ENST00000372246 VSIG10Q8N0Z9 540 aa7.02□□□□□ -1.29
ATG4A-204ENST00000372246 EFCAB3Q8N7B9 438 aa7.02□□□□□ -1.29
ATG4A-204ENST00000372246 NAP1L5Q96NT1 182 aaPredicted RBP7.02□□□□□ -1.29
ATG4A-204ENST00000372246 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.02□□□□□ -1.29
ATG4A-204ENST00000372246 COG6Q9Y2V7 657 aa7.02□□□□□ -1.29
ATG4A-204ENST00000372246 URB2Q14146 1524 aaKnown RBP7.02□□□□□ -1.29
ATG4A-204ENST00000372246 CENPQQ7L2Z9 268 aaPredicted RBP7.02□□□□□ -1.29
ATG4A-204ENST00000372246 PARD3Q8TEW0 1356 aa7.02□□□□□ -1.29
ATG4A-204ENST00000372246 KIAA0586Q9BVV6 1533 aa7.02□□□□□ -1.29
ATG4A-204ENST00000372246 APAF1O14727 1248 aa7.01□□□□□ -1.29
ATG4A-204ENST00000372246 FAM43AQ8N2R8 423 aa7.01□□□□□ -1.29
ATG4A-204ENST00000372246 CLUAP1Q96AJ1 413 aa7.01□□□□□ -1.29
ATG4A-204ENST00000372246 RRP7AQ9Y3A4 280 aaKnown RBP7.01□□□□□ -1.29
ATG4A-204ENST00000372246 XRCC6P12956 609 aaKnown RBP eCLIP7□□□□□ -1.29
ATG4A-204ENST00000372246 TNNT2P45379 298 aaPredicted RBP7□□□□□ -1.29
ATG4A-204ENST00000372246 PDE3BQ13370 1112 aa7□□□□□ -1.29
ATG4A-204ENST00000372246 SCUBE2Q9NQ36 999 aa7□□□□□ -1.29
ATG4A-204ENST00000372246 DNMBPQ6XZF7 1577 aa7□□□□□ -1.29
ATG4A-204ENST00000372246 DPY19L2Q6NUT2 758 aa7□□□□□ -1.29
ATG4A-204ENST00000372246 TESK2Q96S53 571 aa7□□□□□ -1.29
ATG4A-204ENST00000372246 BCL11BQ9C0K0 894 aaPredicted RBP7□□□□□ -1.29
ATG4A-204ENST00000372246 POLR1AO95602 1720 aaPredicted RBP7□□□□□ -1.29
ATG4A-204ENST00000372246 CAMSAP2Q08AD1 1489 aa7□□□□□ -1.29
ATG4A-204ENST00000372246 PRDM2Q13029 1718 aa6.99□□□□□ -1.29
ATG4A-204ENST00000372246 LAMC3Q9Y6N6 1575 aa6.99□□□□□ -1.29
ATG4A-204ENST00000372246 WDR43Q15061 677 aaKnown RBP eCLIP6.99□□□□□ -1.29
ATG4A-204ENST00000372246 PPP2R1AP30153 589 aa6.99□□□□□ -1.29
ATG4A-204ENST00000372246 ZMYND15Q9H091 742 aa6.99□□□□□ -1.29
ATG4A-204ENST00000372246 RSPH6AQ9H0K4 717 aa6.99□□□□□ -1.29
ATG4A-204ENST00000372246 ROCK1Q13464 1354 aa6.99□□□□□ -1.29
ATG4A-204ENST00000372246 ANKRD50Q9ULJ7 1429 aa6.98□□□□□ -1.29
ATG4A-204ENST00000372246 KIF14Q15058 1648 aa6.98□□□□□ -1.29
ATG4A-204ENST00000372246 CUL7Q14999 1698 aa6.98□□□□□ -1.29
ATG4A-204ENST00000372246 RALGAPBQ86X10 1494 aa6.98□□□□□ -1.29
ATG4A-204ENST00000372246 ARID3AQ99856 593 aa6.98□□□□□ -1.29
ATG4A-204ENST00000372246 TBC1D2Q9BYX2 928 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms