RNA–Protein interactions for RNA: ENST00000369448.3

FAM46C-201, Transcript of Putative nucleotidyltransferase FAM46C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM46C, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM46C-201ENST00000369448 VGFO15240 615 aaPredicted RBP18.45■□□□□ 0.54
FAM46C-201ENST00000369448 TCP11L2Q8N4U5 519 aa18.45■□□□□ 0.54
FAM46C-201ENST00000369448 EFCAB5A4FU69 1503 aa18.45■□□□□ 0.54
FAM46C-201ENST00000369448 DIAPH1O60610 1272 aaKnown RBP18.44■□□□□ 0.54
FAM46C-201ENST00000369448 RILPL2Q969X0 211 aa18.44■□□□□ 0.54
FAM46C-201ENST00000369448 CDK11BP21127 795 aaKnown RBP18.43■□□□□ 0.54
FAM46C-201ENST00000369448 ANO8Q9HCE9 1232 aaPredicted RBP18.42■□□□□ 0.54
FAM46C-201ENST00000369448 PRDM2Q13029 1718 aa18.42■□□□□ 0.54
FAM46C-201ENST00000369448 MTHFSP49914 203 aa18.42■□□□□ 0.54
FAM46C-201ENST00000369448 VSIG10Q8N0Z9 540 aa18.42■□□□□ 0.54
FAM46C-201ENST00000369448 PDZRN3Q9UPQ7 1066 aa18.41■□□□□ 0.54
FAM46C-201ENST00000369448 EHBP1L1Q8N3D4 1523 aa18.41■□□□□ 0.54
FAM46C-201ENST00000369448 SKAP1Q86WV1 359 aa18.41■□□□□ 0.54
FAM46C-201ENST00000369448 AAMPQ13685 434 aa18.4■□□□□ 0.54
FAM46C-201ENST00000369448 CFAP70Q5T0N1 1121 aa18.4■□□□□ 0.54
FAM46C-201ENST00000369448 STAC3Q96MF2 364 aa18.4■□□□□ 0.54
FAM46C-201ENST00000369448 PHF14O94880 888 aa18.4■□□□□ 0.54
FAM46C-201ENST00000369448 PDE3AQ14432 1141 aa18.39■□□□□ 0.53
FAM46C-201ENST00000369448 GGNBP2Q9H3C7 697 aa18.39■□□□□ 0.53
FAM46C-201ENST00000369448 TMEM132EQ6IEE7 984 aa18.38■□□□□ 0.53
FAM46C-201ENST00000369448 AMPHP49418 695 aa18.38■□□□□ 0.53
FAM46C-201ENST00000369448 KIF16BQ96L93 1317 aa18.38■□□□□ 0.53
FAM46C-201ENST00000369448 LTV1Q96GA3 475 aaPredicted RBP18.37■□□□□ 0.53
FAM46C-201ENST00000369448 TRAK2O60296 914 aa18.37■□□□□ 0.53
FAM46C-201ENST00000369448 COG3Q96JB2 828 aa18.37■□□□□ 0.53
FAM46C-201ENST00000369448 REC8O95072 547 aa18.36■□□□□ 0.53
FAM46C-201ENST00000369448 API5Q9BZZ5 524 aaKnown RBP18.36■□□□□ 0.53
FAM46C-201ENST00000369448 HTATSF1O43719 755 aaKnown RBP18.36■□□□□ 0.53
FAM46C-201ENST00000369448 DAPK1P53355 1430 aa18.36■□□□□ 0.53
FAM46C-201ENST00000369448 CSPP1Q1MSJ5 1256 aa18.36■□□□□ 0.53
FAM46C-201ENST00000369448 NGDNQ8NEJ9 315 aaKnown RBP18.36■□□□□ 0.53
FAM46C-201ENST00000369448 GPATCH3Q96I76 525 aa18.36■□□□□ 0.53
FAM46C-201ENST00000369448 PRG4Q92954 1404 aaPredicted RBP18.36■□□□□ 0.53
FAM46C-201ENST00000369448 MRE11P49959 708 aa18.35■□□□□ 0.53
FAM46C-201ENST00000369448 HMOX1P09601 288 aa18.34■□□□□ 0.53
FAM46C-201ENST00000369448 FAM43AQ8N2R8 423 aa18.34■□□□□ 0.53
FAM46C-201ENST00000369448 ANKRD30BQ9BXX2 1392 aa18.34■□□□□ 0.53
FAM46C-201ENST00000369448 GNL2Q13823 731 aaKnown RBP18.34■□□□□ 0.53
FAM46C-201ENST00000369448 CHMP4AQ9BY43 222 aa18.34■□□□□ 0.53
FAM46C-201ENST00000369448 MCTP1Q6DN14 999 aa18.33■□□□□ 0.53
FAM46C-201ENST00000369448 CABP2Q9NPB3 220 aa18.33■□□□□ 0.53
FAM46C-201ENST00000369448 EXOSC9Q06265 439 aaKnown RBP18.33■□□□□ 0.52
FAM46C-201ENST00000369448 POLA1P09884 1462 aaPredicted RBP18.32■□□□□ 0.52
FAM46C-201ENST00000369448 HSP90B1P14625 803 aaKnown RBP18.32■□□□□ 0.52
FAM46C-201ENST00000369448 C20orf194Q5TEA3 1177 aa18.32■□□□□ 0.52
FAM46C-201ENST00000369448 AFAP1Q8N556 730 aa18.32■□□□□ 0.52
FAM46C-201ENST00000369448 PCF11O94913 1555 aaKnown RBP18.32■□□□□ 0.52
FAM46C-201ENST00000369448 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
FAM46C-201ENST00000369448 NUCB2P80303 420 aa18.31■□□□□ 0.52
FAM46C-201ENST00000369448 NESP48681 1621 aa18.31■□□□□ 0.52
FAM46C-201ENST00000369448 AMER1Q5JTC6 1135 aaPredicted RBP18.3■□□□□ 0.52
FAM46C-201ENST00000369448 TSR2Q969E8 191 aaKnown RBP18.3■□□□□ 0.52
FAM46C-201ENST00000369448 SLC12A5Q9H2X9 1139 aa18.3■□□□□ 0.52
FAM46C-201ENST00000369448 HDAC5Q9UQL6 1122 aa18.3■□□□□ 0.52
FAM46C-201ENST00000369448 NCOA1Q15788 1441 aa18.3■□□□□ 0.52
FAM46C-201ENST00000369448 ANO2Q9NQ90 1003 aa18.3■□□□□ 0.52
FAM46C-201ENST00000369448 FAM13BQ9NYF5 915 aa18.3■□□□□ 0.52
FAM46C-201ENST00000369448 GNAI1P63096 354 aa18.29■□□□□ 0.52
FAM46C-201ENST00000369448 INTS3Q68E01 1043 aaKnown RBP18.29■□□□□ 0.52
FAM46C-201ENST00000369448 TOPBP1Q92547 1522 aa18.29■□□□□ 0.52
FAM46C-201ENST00000369448 SUPT6HQ7KZ85 1726 aaKnown RBP18.28■□□□□ 0.52
FAM46C-201ENST00000369448 NECTIN2Q92692 538 aa18.28■□□□□ 0.52
FAM46C-201ENST00000369448 MAP3K1Q13233 1512 aa18.28■□□□□ 0.52
FAM46C-201ENST00000369448 ERBINQ96RT1 1412 aa18.28■□□□□ 0.52
FAM46C-201ENST00000369448 CHMP3Q9Y3E7 222 aa18.28■□□□□ 0.52
FAM46C-201ENST00000369448 TROQ12816 1431 aaPredicted RBP18.27■□□□□ 0.52
FAM46C-201ENST00000369448 ATP6V1DQ9Y5K8 247 aa18.27■□□□□ 0.52
FAM46C-201ENST00000369448 GRIN2BQ13224 1484 aa18.27■□□□□ 0.52
FAM46C-201ENST00000369448 CDC45O75419 566 aa18.27■□□□□ 0.51
FAM46C-201ENST00000369448 SLFN5Q08AF3 891 aa18.27■□□□□ 0.51
FAM46C-201ENST00000369448 ZNF330Q9Y3S2 320 aaPredicted RBP18.27■□□□□ 0.51
FAM46C-201ENST00000369448 MAPKBP1O60336 1514 aa18.26■□□□□ 0.51
FAM46C-201ENST00000369448 NASPP49321 788 aaPredicted RBP18.26■□□□□ 0.51
FAM46C-201ENST00000369448 CDK13Q14004 1512 aaKnown RBP18.26■□□□□ 0.51
FAM46C-201ENST00000369448 ROCK1Q13464 1354 aa18.26■□□□□ 0.51
FAM46C-201ENST00000369448 C1orf115Q9H7X2 142 aa18.25■□□□□ 0.51
FAM46C-201ENST00000369448 NOB1Q9ULX3 412 aaKnown RBP18.24■□□□□ 0.51
FAM46C-201ENST00000369448 EPRSP07814 1512 aaKnown RBP18.24■□□□□ 0.51
FAM46C-201ENST00000369448 DIAPH3Q9NSV4 1193 aa18.24■□□□□ 0.51
FAM46C-201ENST00000369448 GORABQ5T7V8 394 aa18.23■□□□□ 0.51
FAM46C-201ENST00000369448 CSB-PGBD3P0DP91 1061 aa18.23■□□□□ 0.51
FAM46C-201ENST00000369448 FKBP5Q13451 457 aaPredicted RBP18.23■□□□□ 0.51
FAM46C-201ENST00000369448 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.23■□□□□ 0.51
FAM46C-201ENST00000369448 TULP1O00294 542 aaPredicted RBP18.22■□□□□ 0.51
FAM46C-201ENST00000369448 EIF2S2P20042 333 aaKnown RBP18.22■□□□□ 0.51
FAM46C-201ENST00000369448 HMGXB3Q12766 1538 aa18.21■□□□□ 0.51
FAM46C-201ENST00000369448 CAVIN1Q6NZI2 390 aaKnown RBP18.21■□□□□ 0.51
FAM46C-201ENST00000369448 RNF214Q8ND24 703 aa18.21■□□□□ 0.51
FAM46C-201ENST00000369448 TPM4P67936 248 aa18.21■□□□□ 0.51
FAM46C-201ENST00000369448 HECW1Q76N89 1606 aa18.21■□□□□ 0.51
FAM46C-201ENST00000369448 ARHGAP5Q13017 1502 aa18.21■□□□□ 0.51
FAM46C-201ENST00000369448 MVPQ14764 893 aaKnown RBP18.21■□□□□ 0.51
FAM46C-201ENST00000369448 PRKAR2BP31323 418 aa18.2■□□□□ 0.5
FAM46C-201ENST00000369448 WDR63Q8IWG1 891 aa18.2■□□□□ 0.5
FAM46C-201ENST00000369448 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.2■□□□□ 0.5
FAM46C-201ENST00000369448 WWC1Q8IX03 1113 aa18.2■□□□□ 0.5
FAM46C-201ENST00000369448 H3BQV1 296 aa18.2■□□□□ 0.5
FAM46C-201ENST00000369448 IFFO2Q5TF58 517 aa18.2■□□□□ 0.5
FAM46C-201ENST00000369448 CCDC9Q9Y3X0 531 aaKnown RBP18.19■□□□□ 0.5
FAM46C-201ENST00000369448 MCM4P33991 863 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms