RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 GOLGA6L22H0YM25 854 aa10.49□□□□□ -0.73
CD46-209ENST00000367047 AEBP1Q8IUX7 1158 aa10.49□□□□□ -0.73
CD46-209ENST00000367047 TOP2BQ02880 1626 aa10.49□□□□□ -0.73
CD46-209ENST00000367047 BCORL1Q5H9F3 1711 aa10.49□□□□□ -0.73
CD46-209ENST00000367047 PDZRN3Q9UPQ7 1066 aa10.49□□□□□ -0.73
CD46-209ENST00000367047 ANKRD30BQ9BXX2 1392 aa10.49□□□□□ -0.73
CD46-209ENST00000367047 PTMAP06454 111 aaKnown RBP10.49□□□□□ -0.73
CD46-209ENST00000367047 IRX3P78415 501 aaPredicted RBP10.49□□□□□ -0.73
CD46-209ENST00000367047 CAVIN1Q6NZI2 390 aaKnown RBP10.49□□□□□ -0.73
CD46-209ENST00000367047 EIF3AQ14152 1382 aaKnown RBP10.48□□□□□ -0.73
CD46-209ENST00000367047 DHX37Q8IY37 1157 aaKnown RBP10.48□□□□□ -0.73
CD46-209ENST00000367047 MPNDQ8N594 471 aa10.48□□□□□ -0.73
CD46-209ENST00000367047 RAB3GAP1Q15042 981 aa10.48□□□□□ -0.73
CD46-209ENST00000367047 RPRD2Q5VT52 1461 aaKnown RBP10.48□□□□□ -0.73
CD46-209ENST00000367047 PTMSP20962 102 aa10.47□□□□□ -0.73
CD46-209ENST00000367047 U2AF2P26368 475 aaKnown RBP eCLIP10.47□□□□□ -0.735e-9■■■□□ 14.8
CD46-209ENST00000367047 PDLIM2Q96JY6 352 aa10.47□□□□□ -0.73
CD46-209ENST00000367047 MCM5P33992 734 aa10.47□□□□□ -0.73
CD46-209ENST00000367047 PDCL2Q8N4E4 241 aa10.47□□□□□ -0.73
CD46-209ENST00000367047 TEX14Q8IWB6 1497 aa10.47□□□□□ -0.73
CD46-209ENST00000367047 CUX1P39880 1505 aa10.47□□□□□ -0.73
CD46-209ENST00000367047 PCF11O94913 1555 aaKnown RBP10.47□□□□□ -0.73
CD46-209ENST00000367047 PLEKHH1Q9ULM0 1364 aa10.47□□□□□ -0.73
CD46-209ENST00000367047 SSFA2P28290 1259 aa10.47□□□□□ -0.73
CD46-209ENST00000367047 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
CD46-209ENST00000367047 KLHL40Q2TBA0 621 aa10.47□□□□□ -0.73
CD46-209ENST00000367047 TEX2Q8IWB9 1127 aa10.47□□□□□ -0.73
CD46-209ENST00000367047 CCDC39Q9UFE4 941 aa10.47□□□□□ -0.73
CD46-209ENST00000367047 FHOD3Q2V2M9 1422 aa10.46□□□□□ -0.73
CD46-209ENST00000367047 DDIT3P35638 169 aa10.46□□□□□ -0.73
CD46-209ENST00000367047 KIF3AQ9Y496 699 aa10.46□□□□□ -0.73
CD46-209ENST00000367047 CGNL1Q0VF96 1302 aa10.46□□□□□ -0.74
CD46-209ENST00000367047 KIAA2012Q0VF49 1180 aa10.46□□□□□ -0.74
CD46-209ENST00000367047 POLR1AO95602 1720 aaPredicted RBP10.45□□□□□ -0.74
CD46-209ENST00000367047 NBPF1Q3BBV0 1214 aa10.45□□□□□ -0.74
CD46-209ENST00000367047 ZSCAN23Q3MJ62 389 aa10.45□□□□□ -0.74
CD46-209ENST00000367047 ZBTB9Q96C00 473 aa10.45□□□□□ -0.74
CD46-209ENST00000367047 CIZ1Q9ULV3 898 aaPredicted RBP10.45□□□□□ -0.74
CD46-209ENST00000367047 PARD3Q8TEW0 1356 aa10.45□□□□□ -0.74
CD46-209ENST00000367047 KDM2AQ9Y2K7 1162 aa10.44□□□□□ -0.74
CD46-209ENST00000367047 SLFN5Q08AF3 891 aa10.44□□□□□ -0.74
CD46-209ENST00000367047 WDR43Q15061 677 aaKnown RBP eCLIP10.44□□□□□ -0.74
CD46-209ENST00000367047 SMC5Q8IY18 1101 aa10.44□□□□□ -0.74
CD46-209ENST00000367047 RNF214Q8ND24 703 aa10.44□□□□□ -0.74
CD46-209ENST00000367047 RGS22Q8NE09 1264 aa10.44□□□□□ -0.74
CD46-209ENST00000367047 DNAJC2Q99543 621 aaKnown RBP10.44□□□□□ -0.74
CD46-209ENST00000367047 BCL2L12Q9HB09 334 aa10.44□□□□□ -0.74
CD46-209ENST00000367047 SPINK5Q9NQ38 1064 aaPredicted RBP10.44□□□□□ -0.74
CD46-209ENST00000367047 HMGN5P82970 282 aaKnown RBP10.44□□□□□ -0.74
CD46-209ENST00000367047 MCTP1Q6DN14 999 aa10.44□□□□□ -0.74
CD46-209ENST00000367047 PCDHB15Q9Y5E8 787 aa10.44□□□□□ -0.74
CD46-209ENST00000367047 BLMP54132 1417 aaPredicted RBP10.43□□□□□ -0.74
CD46-209ENST00000367047 ZNF445P59923 1031 aa10.43□□□□□ -0.74
CD46-209ENST00000367047 PRIMPOLQ96LW4 560 aa10.43□□□□□ -0.74
CD46-209ENST00000367047 PMFBP1Q8TBY8 1022 aa10.43□□□□□ -0.74
CD46-209ENST00000367047 CFAP43Q8NDM7 1665 aa10.42□□□□□ -0.74
CD46-209ENST00000367047 BAG4O95429 457 aaKnown RBP10.42□□□□□ -0.74
CD46-209ENST00000367047 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.42□□□□□ -0.74
CD46-209ENST00000367047 CCDC146Q8IYE0 955 aa10.42□□□□□ -0.74
CD46-209ENST00000367047 C17orf53Q8N3J3 647 aaPredicted RBP10.42□□□□□ -0.74
CD46-209ENST00000367047 ZMYM4Q5VZL5 1548 aa10.42□□□□□ -0.74
CD46-209ENST00000367047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.42□□□□□ -0.74
CD46-209ENST00000367047 TRERF1Q96PN7 1200 aa10.42□□□□□ -0.74
CD46-209ENST00000367047 RBM27Q9P2N5 1060 aaKnown RBP10.42□□□□□ -0.74
CD46-209ENST00000367047 PRDM2Q13029 1718 aa10.41□□□□□ -0.74
CD46-209ENST00000367047 TRIM6-TRIM34B2RNG4 842 aa10.41□□□□□ -0.74
CD46-209ENST00000367047 TRIM34Q9BYJ4 488 aa10.41□□□□□ -0.74
CD46-209ENST00000367047 VIRMAQ69YN4 1812 aaKnown RBP10.41□□□□□ -0.74
CD46-209ENST00000367047 IBTKQ9P2D0 1353 aaPredicted RBP10.41□□□□□ -0.74
CD46-209ENST00000367047 PER1O15534 1290 aaPredicted RBP10.41□□□□□ -0.74
CD46-209ENST00000367047 RBM25P49756 843 aaKnown RBP10.41□□□□□ -0.74
CD46-209ENST00000367047 PDE3AQ14432 1141 aa10.41□□□□□ -0.74
CD46-209ENST00000367047 KDM6BO15054 1643 aa10.41□□□□□ -0.74
CD46-209ENST00000367047 IGF1RP08069 1367 aa10.4□□□□□ -0.74
CD46-209ENST00000367047 BRD2P25440 801 aaKnown RBP10.4□□□□□ -0.74
CD46-209ENST00000367047 CHMP4CQ96CF2 233 aa10.4□□□□□ -0.74
CD46-209ENST00000367047 CARMIL1Q5VZK9 1371 aa10.4□□□□□ -0.74
CD46-209ENST00000367047 RTEL1-TNFRSF6BF6WH68 1400 aa10.4□□□□□ -0.75
CD46-209ENST00000367047 CHRM1P11229 460 aaPredicted RBP10.39□□□□□ -0.75
CD46-209ENST00000367047 GTF2F1P35269 517 aaKnown RBP eCLIP10.39□□□□□ -0.75
CD46-209ENST00000367047 NOLC1Q14978 699 aaKnown RBP eCLIP10.39□□□□□ -0.752e-8■■■□□ 18.1
CD46-209ENST00000367047 TIGD1Q96MW7 591 aa10.39□□□□□ -0.75
CD46-209ENST00000367047 PLEKHH2Q8IVE3 1493 aa10.39□□□□□ -0.75
CD46-209ENST00000367047 HECW1Q76N89 1606 aa10.39□□□□□ -0.75
CD46-209ENST00000367047 CD2BP2O95400 341 aaKnown RBP10.39□□□□□ -0.75
CD46-209ENST00000367047 SNX21Q969T3 373 aa10.39□□□□□ -0.75
CD46-209ENST00000367047 RWDD1Q9H446 243 aaPredicted RBP10.39□□□□□ -0.75
CD46-209ENST00000367047 SYCE3A1L190 88 aa10.39□□□□□ -0.75
CD46-209ENST00000367047 CCDC66A2RUB6 948 aa10.39□□□□□ -0.75
CD46-209ENST00000367047 ERICH4A6NGS2 130 aa10.39□□□□□ -0.75
CD46-209ENST00000367047 NCOA3Q9Y6Q9 1424 aa10.38□□□□□ -0.75
CD46-209ENST00000367047 ZNF521Q96K83 1311 aa10.38□□□□□ -0.75
CD46-209ENST00000367047 PRPF40AO75400 957 aaKnown RBP10.38□□□□□ -0.75
CD46-209ENST00000367047 CASKIN1Q8WXD9 1431 aa10.38□□□□□ -0.75
CD46-209ENST00000367047 APAF1O14727 1248 aa10.37□□□□□ -0.75
CD46-209ENST00000367047 TNNQ9UQP3 1299 aa10.37□□□□□ -0.75
CD46-209ENST00000367047 CAPN2P17655 700 aa10.37□□□□□ -0.75
CD46-209ENST00000367047 GAS2L2Q8NHY3 880 aa10.37□□□□□ -0.75
CD46-209ENST00000367047 OGFRQ9NZT2 677 aa10.37□□□□□ -0.75
CD46-209ENST00000367047 CFTRP13569 1480 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms