RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 TRPM2O94759 1503 aa29.56■■■□□ 2.32
H3F3A-204ENST00000366816 CLTCL1P53675 1640 aa29.56■■■□□ 2.32
H3F3A-204ENST00000366816 ZFYVE9O95405 1425 aa29.55■■■□□ 2.32
H3F3A-204ENST00000366816 PPP1R15AO75807 674 aaPredicted RBP29.53■■■□□ 2.32
H3F3A-204ENST00000366816 BCANQ96GW7 911 aa29.53■■■□□ 2.32
H3F3A-204ENST00000366816 SLC26A8Q96RN1 970 aa29.52■■■□□ 2.32
H3F3A-204ENST00000366816 ACIN1Q9UKV3 1341 aaKnown RBP29.51■■■□□ 2.32
H3F3A-204ENST00000366816 HDGFP51858 240 aaKnown RBP29.51■■■□□ 2.31
H3F3A-204ENST00000366816 ZNF326Q5BKZ1 582 aaKnown RBP29.51■■■□□ 2.31
H3F3A-204ENST00000366816 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.48■■■□□ 2.31
H3F3A-204ENST00000366816 PLEKHG1Q9ULL1 1385 aa29.44■■■□□ 2.3
H3F3A-204ENST00000366816 HRCP23327 699 aa29.44■■■□□ 2.3
H3F3A-204ENST00000366816 STRCP1A6NGW2 1772 aa29.41■■■□□ 2.3
H3F3A-204ENST00000366816 KIF1BO60333 1816 aa29.41■■■□□ 2.3
H3F3A-204ENST00000366816 CPS1P31327 1500 aa29.4■■■□□ 2.3
H3F3A-204ENST00000366816 CCDC144AA2RUR9 1427 aa29.38■■■□□ 2.29
H3F3A-204ENST00000366816 RGL3Q3MIN7 710 aa29.34■■■□□ 2.29
H3F3A-204ENST00000366816 IQSEC2Q5JU85 1478 aa29.34■■■□□ 2.29
H3F3A-204ENST00000366816 NEXMIFQ5QGS0 1516 aa29.34■■■□□ 2.29
H3F3A-204ENST00000366816 KCNA6P17658 529 aa29.33■■■□□ 2.29
H3F3A-204ENST00000366816 TBX22Q9Y458 520 aa29.33■■■□□ 2.29
H3F3A-204ENST00000366816 ADAMTS13Q76LX8 1427 aa29.33■■■□□ 2.29
H3F3A-204ENST00000366816 LRRC7Q96NW7 1537 aa29.31■■■□□ 2.28
H3F3A-204ENST00000366816 UBAP1LF5GYI3 381 aa29.29■■■□□ 2.28
H3F3A-204ENST00000366816 RBM33Q96EV2 1170 aaKnown RBP29.28■■■□□ 2.28
H3F3A-204ENST00000366816 SPATA31E1Q6ZUB1 1445 aa29.28■■■□□ 2.28
H3F3A-204ENST00000366816 RPGRIP1LQ68CZ1 1315 aa29.27■■■□□ 2.28
H3F3A-204ENST00000366816 TRIM26Q12899 539 aaPredicted RBP29.27■■■□□ 2.28
H3F3A-204ENST00000366816 ANKRD30BQ9BXX2 1392 aa29.26■■■□□ 2.28
H3F3A-204ENST00000366816 VGFO15240 615 aaPredicted RBP29.26■■■□□ 2.27
H3F3A-204ENST00000366816 NRXN3Q9Y4C0 1643 aa29.24■■■□□ 2.27
H3F3A-204ENST00000366816 PROSER2Q86WR7 435 aaPredicted RBP29.24■■■□□ 2.27
H3F3A-204ENST00000366816 SETBP1Q9Y6X0 1596 aa29.22■■■□□ 2.27
H3F3A-204ENST00000366816 DIP2AQ14689 1571 aa29.21■■■□□ 2.27
H3F3A-204ENST00000366816 TMEM94Q12767 1356 aa29.2■■■□□ 2.26
H3F3A-204ENST00000366816 CHD2O14647 1828 aaKnown RBP29.2■■■□□ 2.26
H3F3A-204ENST00000366816 PPLO60437 1756 aa29.19■■■□□ 2.26
H3F3A-204ENST00000366816 NWD1Q149M9 1564 aa29.19■■■□□ 2.26
H3F3A-204ENST00000366816 METP08581 1390 aa29.19■■■□□ 2.26
H3F3A-204ENST00000366816 ADGRF5Q8IZF2 1346 aa29.19■■■□□ 2.26
H3F3A-204ENST00000366816 AMOTL2Q9Y2J4 779 aa29.18■■■□□ 2.26
H3F3A-204ENST00000366816 PTPRUQ92729 1446 aa29.18■■■□□ 2.26
H3F3A-204ENST00000366816 XIRP1Q702N8 1843 aaKnown RBP29.16■■■□□ 2.26
H3F3A-204ENST00000366816 TOM1O60784 492 aa29.16■■■□□ 2.26
H3F3A-204ENST00000366816 PIP4K2BP78356 416 aa29.16■■■□□ 2.26
H3F3A-204ENST00000366816 PIK3R4Q99570 1358 aa29.15■■■□□ 2.26
H3F3A-204ENST00000366816 NKTRP30414 1462 aaKnown RBP29.15■■■□□ 2.26
H3F3A-204ENST00000366816 SCAF1Q9H7N4 1312 aaKnown RBP29.14■■■□□ 2.25
H3F3A-204ENST00000366816 ALKQ9UM73 1620 aa29.1■■■□□ 2.25
H3F3A-204ENST00000366816 IFT172Q9UG01 1749 aa29.09■■■□□ 2.25
H3F3A-204ENST00000366816 SETD1AO15047 1707 aaKnown RBP29.04■■■□□ 2.24
H3F3A-204ENST00000366816 C14orf37Q86TY3 774 aa29.04■■■□□ 2.24
H3F3A-204ENST00000366816 KDM2AQ9Y2K7 1162 aa29.03■■■□□ 2.24
H3F3A-204ENST00000366816 XRN1Q8IZH2 1706 aaKnown RBP29.03■■■□□ 2.24
H3F3A-204ENST00000366816 DCAF11Q8TEB1 546 aa29.02■■■□□ 2.24
H3F3A-204ENST00000366816 PIK3C2GO75747 1445 aa29.01■■■□□ 2.23
H3F3A-204ENST00000366816 MSH6P52701 1360 aa29.01■■■□□ 2.23
H3F3A-204ENST00000366816 TMEM132EQ6IEE7 984 aa29■■■□□ 2.23
H3F3A-204ENST00000366816 CFAP70Q5T0N1 1121 aa28.97■■■□□ 2.23
H3F3A-204ENST00000366816 DHX57Q6P158 1386 aaKnown RBP28.97■■■□□ 2.23
H3F3A-204ENST00000366816 MYOM2P54296 1465 aa28.97■■■□□ 2.23
H3F3A-204ENST00000366816 SIN3AQ96ST3 1273 aa28.96■■■□□ 2.23
H3F3A-204ENST00000366816 STK26Q9P289 416 aa28.96■■■□□ 2.23
H3F3A-204ENST00000366816 NRXN1Q9ULB1 1477 aa28.96■■■□□ 2.23
H3F3A-204ENST00000366816 NCOA3Q9Y6Q9 1424 aa28.95■■■□□ 2.23
H3F3A-204ENST00000366816 HSPA1LP34931 641 aa28.95■■■□□ 2.22
H3F3A-204ENST00000366816 C19orf44Q9H6X5 657 aa28.95■■■□□ 2.22
H3F3A-204ENST00000366816 C14orf93Q9H972 538 aaKnown RBP28.95■■■□□ 2.22
H3F3A-204ENST00000366816 ROBO2Q9HCK4 1378 aa28.94■■■□□ 2.22
H3F3A-204ENST00000366816 ASXL1Q8IXJ9 1541 aa28.91■■■□□ 2.22
H3F3A-204ENST00000366816 SLAIN2Q9P270 581 aa28.91■■■□□ 2.22
H3F3A-204ENST00000366816 NEUROD1Q13562 356 aa28.9■■■□□ 2.22
H3F3A-204ENST00000366816 ATF3P18847 181 aa28.89■■■□□ 2.22
H3F3A-204ENST00000366816 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.89■■■□□ 2.21
H3F3A-204ENST00000366816 PCGF6Q9BYE7 350 aa28.88■■■□□ 2.21
H3F3A-204ENST00000366816 PTCH1Q13635 1447 aa28.87■■■□□ 2.21
H3F3A-204ENST00000366816 LRPPRCP42704 1394 aaKnown RBP28.87■■■□□ 2.21
H3F3A-204ENST00000366816 CADPS2Q86UW7 1296 aa28.86■■■□□ 2.21
H3F3A-204ENST00000366816 WAPLQ7Z5K2 1190 aa28.85■■■□□ 2.21
H3F3A-204ENST00000366816 STAC3Q96MF2 364 aa28.84■■■□□ 2.21
H3F3A-204ENST00000366816 FAM135BQ49AJ0 1406 aa28.84■■■□□ 2.21
H3F3A-204ENST00000366816 YTHDC2Q9H6S0 1430 aaKnown RBP28.84■■■□□ 2.21
H3F3A-204ENST00000366816 ABCC11Q96J66 1382 aa28.83■■■□□ 2.21
H3F3A-204ENST00000366816 PRAG1Q86YV5 1406 aa28.83■■■□□ 2.21
H3F3A-204ENST00000366816 ADGRL3Q9HAR2 1447 aa28.82■■■□□ 2.2
H3F3A-204ENST00000366816 L3MBTL2Q969R5 705 aa28.8■■■□□ 2.2
H3F3A-204ENST00000366816 NALCNQ8IZF0 1738 aa28.8■■■□□ 2.2
H3F3A-204ENST00000366816 ROBO1Q9Y6N7 1651 aa28.8■■■□□ 2.2
H3F3A-204ENST00000366816 LAMC1P11047 1609 aa28.8■■■□□ 2.2
H3F3A-204ENST00000366816 TECPR2O15040 1411 aa28.79■■■□□ 2.2
H3F3A-204ENST00000366816 PLEKHH1Q9ULM0 1364 aa28.79■■■□□ 2.2
H3F3A-204ENST00000366816 DCCP43146 1447 aa28.77■■■□□ 2.2
H3F3A-204ENST00000366816 ADGRB1O14514 1584 aa28.75■■■□□ 2.19
H3F3A-204ENST00000366816 TRAK1Q9UPV9 953 aa28.74■■■□□ 2.19
H3F3A-204ENST00000366816 MST1RQ04912 1400 aa28.73■■■□□ 2.19
H3F3A-204ENST00000366816 KNDC1Q76NI1 1749 aa28.72■■■□□ 2.19
H3F3A-204ENST00000366816 SAFB2Q14151 953 aaKnown RBP eCLIP28.72■■■□□ 2.19
H3F3A-204ENST00000366816 BRINP3Q76B58 766 aa28.71■■■□□ 2.19
H3F3A-204ENST00000366816 SIRT1Q96EB6 747 aa28.71■■■□□ 2.19
H3F3A-204ENST00000366816 PRAM1Q96QH2 718 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms