RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 NWD1Q149M9 1564 aa15.9■□□□□ 0.14
PARP1-201ENST00000366790 NUP155O75694 1391 aa15.89■□□□□ 0.13
PARP1-201ENST00000366790 PLEKHG1Q9ULL1 1385 aa15.89■□□□□ 0.13
PARP1-201ENST00000366790 RIMS2Q9UQ26 1411 aa15.89■□□□□ 0.13
PARP1-201ENST00000366790 NKTRP30414 1462 aaKnown RBP15.88■□□□□ 0.13
PARP1-201ENST00000366790 ITGAEP38570 1179 aa15.87■□□□□ 0.13
PARP1-201ENST00000366790 PPARGC1BQ86YN6 1023 aaKnown RBP15.87■□□□□ 0.13
PARP1-201ENST00000366790 SLC26A8Q96RN1 970 aa15.87■□□□□ 0.13
PARP1-201ENST00000366790 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.86■□□□□ 0.13
PARP1-201ENST00000366790 CHD2O14647 1828 aaKnown RBP15.86■□□□□ 0.13
PARP1-201ENST00000366790 TMEM94Q12767 1356 aa15.86■□□□□ 0.13
PARP1-201ENST00000366790 MED1Q15648 1581 aaPredicted RBP15.84■□□□□ 0.13
PARP1-201ENST00000366790 SOCS7O14512 581 aa15.84■□□□□ 0.13
PARP1-201ENST00000366790 FAM135BQ49AJ0 1406 aa15.84■□□□□ 0.13
PARP1-201ENST00000366790 PPP1R15AO75807 674 aaPredicted RBP15.83■□□□□ 0.12
PARP1-201ENST00000366790 TBX22Q9Y458 520 aa15.83■□□□□ 0.12
PARP1-201ENST00000366790 DIP2AQ14689 1571 aa15.83■□□□□ 0.12
PARP1-201ENST00000366790 SPHKAPQ2M3C7 1700 aa15.82■□□□□ 0.12
PARP1-201ENST00000366790 PROSER2Q86WR7 435 aaPredicted RBP15.82■□□□□ 0.12
PARP1-201ENST00000366790 NAIPQ13075 1403 aa15.81■□□□□ 0.12
PARP1-201ENST00000366790 ADAMTS13Q76LX8 1427 aa15.81■□□□□ 0.12
PARP1-201ENST00000366790 BCANQ96GW7 911 aa15.81■□□□□ 0.12
PARP1-201ENST00000366790 PIK3R4Q99570 1358 aa15.81■□□□□ 0.12
PARP1-201ENST00000366790 NCOA3Q9Y6Q9 1424 aa15.8■□□□□ 0.12
PARP1-201ENST00000366790 CHGAP10645 457 aaKnown RBP15.8■□□□□ 0.12
PARP1-201ENST00000366790 MSH6P52701 1360 aa15.77■□□□□ 0.12
PARP1-201ENST00000366790 HFM1A2PYH4 1435 aa15.77■□□□□ 0.11
PARP1-201ENST00000366790 TRPM2O94759 1503 aa15.76■□□□□ 0.11
PARP1-201ENST00000366790 ROBO1Q9Y6N7 1651 aa15.76■□□□□ 0.11
PARP1-201ENST00000366790 SETBP1Q9Y6X0 1596 aa15.75■□□□□ 0.11
PARP1-201ENST00000366790 RBM33Q96EV2 1170 aaKnown RBP15.74■□□□□ 0.11
PARP1-201ENST00000366790 CLTCL1P53675 1640 aa15.73■□□□□ 0.11
PARP1-201ENST00000366790 NRXN3Q9Y4C0 1643 aa15.73■□□□□ 0.11
PARP1-201ENST00000366790 NUTM2DQ5VT03 806 aaPredicted RBP15.73■□□□□ 0.11
PARP1-201ENST00000366790 KIF1BO60333 1816 aa15.73■□□□□ 0.11
PARP1-201ENST00000366790 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
PARP1-201ENST00000366790 SLAIN2Q9P270 581 aa15.71■□□□□ 0.11
PARP1-201ENST00000366790 PTPRUQ92729 1446 aa15.7■□□□□ 0.1
PARP1-201ENST00000366790 NEXMIFQ5QGS0 1516 aa15.7■□□□□ 0.1
PARP1-201ENST00000366790 XRN1Q8IZH2 1706 aaKnown RBP15.7■□□□□ 0.1
PARP1-201ENST00000366790 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.69■□□□□ 0.1
PARP1-201ENST00000366790 PHF23Q9BUL5 403 aaPredicted RBP15.69■□□□□ 0.1
PARP1-201ENST00000366790 C19orf44Q9H6X5 657 aa15.69■□□□□ 0.1
PARP1-201ENST00000366790 AMOTL2Q9Y2J4 779 aa15.69■□□□□ 0.1
PARP1-201ENST00000366790 ZNF326Q5BKZ1 582 aaKnown RBP15.68■□□□□ 0.1
PARP1-201ENST00000366790 CADPS2Q86UW7 1296 aa15.67■□□□□ 0.1
PARP1-201ENST00000366790 DCCP43146 1447 aa15.67■□□□□ 0.1
PARP1-201ENST00000366790 PHLPP1O60346 1717 aa15.66■□□□□ 0.1
PARP1-201ENST00000366790 TRIM52Q96A61 297 aa15.66■□□□□ 0.1
PARP1-201ENST00000366790 SLC4A1APQ9BWU0 796 aaKnown RBP15.65■□□□□ 0.1
PARP1-201ENST00000366790 METP08581 1390 aa15.64■□□□□ 0.09
PARP1-201ENST00000366790 C14orf37Q86TY3 774 aa15.64■□□□□ 0.09
PARP1-201ENST00000366790 ATF3P18847 181 aa15.63■□□□□ 0.09
PARP1-201ENST00000366790 COL16A1Q07092 1604 aaPredicted RBP15.63■□□□□ 0.09
PARP1-201ENST00000366790 AHDC1Q5TGY3 1603 aaPredicted RBP15.63■□□□□ 0.09
PARP1-201ENST00000366790 RPGRIP1LQ68CZ1 1315 aa15.63■□□□□ 0.09
PARP1-201ENST00000366790 JCADQ9P266 1359 aa15.62■□□□□ 0.09
PARP1-201ENST00000366790 VGFO15240 615 aaPredicted RBP15.62■□□□□ 0.09
PARP1-201ENST00000366790 RGS17Q9UGC6 210 aaPredicted RBP15.62■□□□□ 0.09
PARP1-201ENST00000366790 SETD1AO15047 1707 aaKnown RBP15.61■□□□□ 0.09
PARP1-201ENST00000366790 ACIN1Q9UKV3 1341 aaKnown RBP15.61■□□□□ 0.09
PARP1-201ENST00000366790 PRAG1Q86YV5 1406 aa15.6■□□□□ 0.09
PARP1-201ENST00000366790 PPLO60437 1756 aa15.6■□□□□ 0.09
PARP1-201ENST00000366790 ADGRL3Q9HAR2 1447 aa15.59■□□□□ 0.09
PARP1-201ENST00000366790 PTCH1Q13635 1447 aa15.58■□□□□ 0.08
PARP1-201ENST00000366790 BRINP3Q76B58 766 aa15.57■□□□□ 0.08
PARP1-201ENST00000366790 MST1RQ04912 1400 aa15.57■□□□□ 0.08
PARP1-201ENST00000366790 SHPRHQ149N8 1683 aa15.57■□□□□ 0.08
PARP1-201ENST00000366790 SPATA31A6Q5VVP1 1343 aa15.56■□□□□ 0.08
PARP1-201ENST00000366790 NALCNQ8IZF0 1738 aa15.55■□□□□ 0.08
PARP1-201ENST00000366790 ASXL1Q8IXJ9 1541 aa15.55■□□□□ 0.08
PARP1-201ENST00000366790 CCDC144AA2RUR9 1427 aa15.55■□□□□ 0.08
PARP1-201ENST00000366790 MPHOSPH9Q99550 1183 aa15.55■□□□□ 0.08
PARP1-201ENST00000366790 NHSL1Q5SYE7 1610 aa15.54■□□□□ 0.08
PARP1-201ENST00000366790 SPATA31E1Q6ZUB1 1445 aa15.54■□□□□ 0.08
PARP1-201ENST00000366790 FOXD1Q16676 465 aa15.53■□□□□ 0.08
PARP1-201ENST00000366790 IFT172Q9UG01 1749 aa15.53■□□□□ 0.08
PARP1-201ENST00000366790 SETD5Q9C0A6 1442 aa15.52■□□□□ 0.08
PARP1-201ENST00000366790 ANKRD30BQ9BXX2 1392 aa15.51■□□□□ 0.07
PARP1-201ENST00000366790 ROBO2Q9HCK4 1378 aa15.51■□□□□ 0.07
PARP1-201ENST00000366790 POTEAQ6S8J7 498 aa15.51■□□□□ 0.07
PARP1-201ENST00000366790 LRP6O75581 1613 aa15.5■□□□□ 0.07
PARP1-201ENST00000366790 LAMC1P11047 1609 aa15.5■□□□□ 0.07
PARP1-201ENST00000366790 C1orf167Q5SNV9 1468 aa15.49■□□□□ 0.07
PARP1-201ENST00000366790 ADGRF5Q8IZF2 1346 aa15.48■□□□□ 0.07
PARP1-201ENST00000366790 TECPR2O15040 1411 aa15.47■□□□□ 0.07
PARP1-201ENST00000366790 LRRC59Q96AG4 307 aaKnown RBP15.47■□□□□ 0.07
PARP1-201ENST00000366790 PIK3C2GO75747 1445 aa15.46■□□□□ 0.07
PARP1-201ENST00000366790 RGL3Q3MIN7 710 aa15.45■□□□□ 0.06
PARP1-201ENST00000366790 LRPPRCP42704 1394 aaKnown RBP15.45■□□□□ 0.06
PARP1-201ENST00000366790 KNDC1Q76NI1 1749 aa15.45■□□□□ 0.06
PARP1-201ENST00000366790 CDC42BPGQ6DT37 1551 aa15.45■□□□□ 0.06
PARP1-201ENST00000366790 ZNF772Q68DY9 489 aaPredicted RBP15.44■□□□□ 0.06
PARP1-201ENST00000366790 ABCC11Q96J66 1382 aa15.44■□□□□ 0.06
PARP1-201ENST00000366790 MEX3CQ5U5Q3 659 aaKnown RBP15.43■□□□□ 0.06
PARP1-201ENST00000366790 RAB3GAP2Q9H2M9 1393 aa15.43■□□□□ 0.06
PARP1-201ENST00000366790 NRXN1Q9ULB1 1477 aa15.42■□□□□ 0.06
PARP1-201ENST00000366790 PNPLA6Q8IY17 1366 aa15.42■□□□□ 0.06
PARP1-201ENST00000366790 SOS2Q07890 1332 aaPredicted RBP15.42■□□□□ 0.06
PARP1-201ENST00000366790 MYOM2P54296 1465 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms