RNA–Protein interactions for RNA: ENST00000365656.1

RNA5S13-201, Transcript of RNA, 5S ribosomal 13, human

BASIC

Gene RNA5S13, Length 119 nt, Biotype rRNA, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNA5S13-201	ENST00000365656	NUTM2D	Q5VT03	806 aa	Predicted RBP	15.89	■□□□□ 0.13
RNA5S13-201	ENST00000365656	FBXO41	Q8TF61	875 aa		15.88	■□□□□ 0.13
RNA5S13-201	ENST00000365656	SENP3	Q9H4L4	574 aa	Predicted RBP	15.88	■□□□□ 0.13
RNA5S13-201	ENST00000365656	SLC26A8	Q96RN1	970 aa		15.87	■□□□□ 0.13
RNA5S13-201	ENST00000365656	PLEKHG1	Q9ULL1	1385 aa		15.87	■□□□□ 0.13
RNA5S13-201	ENST00000365656	STRCP1	A6NGW2	1772 aa		15.85	■□□□□ 0.13
RNA5S13-201	ENST00000365656	HRC	P23327	699 aa		15.84	■□□□□ 0.13
RNA5S13-201	ENST00000365656	ADAMTS13	Q76LX8	1427 aa		15.84	■□□□□ 0.13
RNA5S13-201	ENST00000365656	CPS1	P31327	1500 aa		15.84	■□□□□ 0.13
RNA5S13-201	ENST00000365656	PPP1R15A	O75807	674 aa	Predicted RBP	15.83	■□□□□ 0.12
RNA5S13-201	ENST00000365656	IQSEC2	Q5JU85	1478 aa		15.83	■□□□□ 0.12
RNA5S13-201	ENST00000365656	NEXMIF	Q5QGS0	1516 aa		15.83	■□□□□ 0.12
RNA5S13-201	ENST00000365656	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	15.82	■□□□□ 0.12
RNA5S13-201	ENST00000365656	ZNF326	Q5BKZ1	582 aa	Known RBP	15.81	■□□□□ 0.12
RNA5S13-201	ENST00000365656	SPATA31E1	Q6ZUB1	1445 aa		15.81	■□□□□ 0.12
RNA5S13-201	ENST00000365656	LRRC7	Q96NW7	1537 aa		15.81	■□□□□ 0.12
RNA5S13-201	ENST00000365656	ACIN1	Q9UKV3	1341 aa	Known RBP	15.81	■□□□□ 0.12
RNA5S13-201	ENST00000365656	CCDC144A	A2RUR9	1427 aa		15.8	■□□□□ 0.12
RNA5S13-201	ENST00000365656	HDGF	P51858	240 aa	Known RBP	15.8	■□□□□ 0.12
RNA5S13-201	ENST00000365656	NRXN3	Q9Y4C0	1643 aa		15.79	■□□□□ 0.12
RNA5S13-201	ENST00000365656	ANKRD30B	Q9BXX2	1392 aa		15.78	■□□□□ 0.12
RNA5S13-201	ENST00000365656	KCNA6	P17658	529 aa		15.78	■□□□□ 0.12
RNA5S13-201	ENST00000365656	BCAN	Q96GW7	911 aa		15.78	■□□□□ 0.12
RNA5S13-201	ENST00000365656	TBX22	Q9Y458	520 aa		15.78	■□□□□ 0.12
RNA5S13-201	ENST00000365656	NWD1	Q149M9	1564 aa		15.77	■□□□□ 0.11
RNA5S13-201	ENST00000365656	SETBP1	Q9Y6X0	1596 aa		15.76	■□□□□ 0.11
RNA5S13-201	ENST00000365656	PTPRU	Q92729	1446 aa		15.76	■□□□□ 0.11
RNA5S13-201	ENST00000365656	ALK	Q9UM73	1620 aa		15.76	■□□□□ 0.11
RNA5S13-201	ENST00000365656	RBM33	Q96EV2	1170 aa	Known RBP	15.75	■□□□□ 0.11
RNA5S13-201	ENST00000365656	KIF1B	O60333	1816 aa		15.75	■□□□□ 0.11
RNA5S13-201	ENST00000365656	RGL3	Q3MIN7	710 aa		15.74	■□□□□ 0.11
RNA5S13-201	ENST00000365656	DIP2A	Q14689	1571 aa		15.74	■□□□□ 0.11
RNA5S13-201	ENST00000365656	MET	P08581	1390 aa		15.74	■□□□□ 0.11
RNA5S13-201	ENST00000365656	RPGRIP1L	Q68CZ1	1315 aa		15.73	■□□□□ 0.11
RNA5S13-201	ENST00000365656	UBAP1L	F5GYI3	381 aa		15.73	■□□□□ 0.11
RNA5S13-201	ENST00000365656	TMEM94	Q12767	1356 aa		15.73	■□□□□ 0.11
RNA5S13-201	ENST00000365656	NKTR	P30414	1462 aa	Known RBP	15.72	■□□□□ 0.11
RNA5S13-201	ENST00000365656	ADGRF5	Q8IZF2	1346 aa		15.72	■□□□□ 0.11
RNA5S13-201	ENST00000365656	PIK3R4	Q99570	1358 aa		15.71	■□□□□ 0.11
RNA5S13-201	ENST00000365656	VGF	O15240	615 aa	Predicted RBP	15.7	■□□□□ 0.1
RNA5S13-201	ENST00000365656	XIRP1	Q702N8	1843 aa	Known RBP	15.69	■□□□□ 0.1
RNA5S13-201	ENST00000365656	TRIM26	Q12899	539 aa	Predicted RBP	15.69	■□□□□ 0.1
RNA5S13-201	ENST00000365656	PROSER2	Q86WR7	435 aa	Predicted RBP	15.69	■□□□□ 0.1
RNA5S13-201	ENST00000365656	PPL	O60437	1756 aa		15.69	■□□□□ 0.1
RNA5S13-201	ENST00000365656	CHD2	O14647	1828 aa	Known RBP	15.68	■□□□□ 0.1
RNA5S13-201	ENST00000365656	AMOTL2	Q9Y2J4	779 aa		15.68	■□□□□ 0.1
RNA5S13-201	ENST00000365656	SETD1A	O15047	1707 aa	Known RBP	15.66	■□□□□ 0.1
RNA5S13-201	ENST00000365656	XRN1	Q8IZH2	1706 aa	Known RBP	15.66	■□□□□ 0.1
RNA5S13-201	ENST00000365656	PIK3C2G	O75747	1445 aa		15.66	■□□□□ 0.1
RNA5S13-201	ENST00000365656	IFT172	Q9UG01	1749 aa		15.65	■□□□□ 0.1
RNA5S13-201	ENST00000365656	TOM1	O60784	492 aa		15.65	■□□□□ 0.1
RNA5S13-201	ENST00000365656	NRXN1	Q9ULB1	1477 aa		15.65	■□□□□ 0.1
RNA5S13-201	ENST00000365656	PIP4K2B	P78356	416 aa		15.64	■□□□□ 0.09
RNA5S13-201	ENST00000365656	ASXL1	Q8IXJ9	1541 aa		15.63	■□□□□ 0.09
RNA5S13-201	ENST00000365656	DHX57	Q6P158	1386 aa	Known RBP	15.63	■□□□□ 0.09
RNA5S13-201	ENST00000365656	MYOM2	P54296	1465 aa		15.63	■□□□□ 0.09
RNA5S13-201	ENST00000365656	ROBO2	Q9HCK4	1378 aa		15.62	■□□□□ 0.09
RNA5S13-201	ENST00000365656	PRAG1	Q86YV5	1406 aa		15.61	■□□□□ 0.09
RNA5S13-201	ENST00000365656	NCOA3	Q9Y6Q9	1424 aa		15.6	■□□□□ 0.09
RNA5S13-201	ENST00000365656	SCAF1	Q9H7N4	1312 aa	Known RBP	15.6	■□□□□ 0.09
RNA5S13-201	ENST00000365656	MSH6	P52701	1360 aa		15.59	■□□□□ 0.09
RNA5S13-201	ENST00000365656	PTCH1	Q13635	1447 aa		15.59	■□□□□ 0.09
RNA5S13-201	ENST00000365656	HSPA1L	P34931	641 aa		15.58	■□□□□ 0.08
RNA5S13-201	ENST00000365656	CFAP70	Q5T0N1	1121 aa		15.58	■□□□□ 0.08
RNA5S13-201	ENST00000365656	TMEM132E	Q6IEE7	984 aa		15.58	■□□□□ 0.08
RNA5S13-201	ENST00000365656	C14orf93	Q9H972	538 aa	Known RBP	15.58	■□□□□ 0.08
RNA5S13-201	ENST00000365656	DCAF11	Q8TEB1	546 aa		15.57	■□□□□ 0.08
RNA5S13-201	ENST00000365656	SIN3A	Q96ST3	1273 aa		15.56	■□□□□ 0.08
RNA5S13-201	ENST00000365656	KDM2A	Q9Y2K7	1162 aa		15.56	■□□□□ 0.08
RNA5S13-201	ENST00000365656	LRPPRC	P42704	1394 aa	Known RBP	15.56	■□□□□ 0.08
RNA5S13-201	ENST00000365656	TECPR2	O15040	1411 aa		15.56	■□□□□ 0.08
RNA5S13-201	ENST00000365656	FAM135B	Q49AJ0	1406 aa		15.55	■□□□□ 0.08
RNA5S13-201	ENST00000365656	C14orf37	Q86TY3	774 aa		15.55	■□□□□ 0.08
RNA5S13-201	ENST00000365656	C19orf44	Q9H6X5	657 aa		15.55	■□□□□ 0.08
RNA5S13-201	ENST00000365656	ADGRL3	Q9HAR2	1447 aa		15.54	■□□□□ 0.08
RNA5S13-201	ENST00000365656	STK26	Q9P289	416 aa		15.54	■□□□□ 0.08
RNA5S13-201	ENST00000365656	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	15.54	■□□□□ 0.08
RNA5S13-201	ENST00000365656	YTHDC2	Q9H6S0	1430 aa	Known RBP	15.53	■□□□□ 0.08
RNA5S13-201	ENST00000365656	ABCC11	Q96J66	1382 aa		15.53	■□□□□ 0.08
RNA5S13-201	ENST00000365656	PLEKHH1	Q9ULM0	1364 aa		15.53	■□□□□ 0.08
RNA5S13-201	ENST00000365656	SLAIN2	Q9P270	581 aa		15.53	■□□□□ 0.08
RNA5S13-201	ENST00000365656	ADGRB1	O14514	1584 aa		15.53	■□□□□ 0.08
RNA5S13-201	ENST00000365656	DCC	P43146	1447 aa		15.51	■□□□□ 0.07
RNA5S13-201	ENST00000365656	WAPL	Q7Z5K2	1190 aa		15.51	■□□□□ 0.07
RNA5S13-201	ENST00000365656	CADPS2	Q86UW7	1296 aa		15.51	■□□□□ 0.07
RNA5S13-201	ENST00000365656	NALCN	Q8IZF0	1738 aa		15.51	■□□□□ 0.07
RNA5S13-201	ENST00000365656	ATF3	P18847	181 aa		15.5	■□□□□ 0.07
RNA5S13-201	ENST00000365656	MST1R	Q04912	1400 aa		15.5	■□□□□ 0.07
RNA5S13-201	ENST00000365656	ROBO1	Q9Y6N7	1651 aa		15.49	■□□□□ 0.07
RNA5S13-201	ENST00000365656	L3MBTL2	Q969R5	705 aa		15.49	■□□□□ 0.07
RNA5S13-201	ENST00000365656	LAMC1	P11047	1609 aa		15.48	■□□□□ 0.07
RNA5S13-201	ENST00000365656	NEUROD1	Q13562	356 aa		15.48	■□□□□ 0.07
RNA5S13-201	ENST00000365656	STAC3	Q96MF2	364 aa		15.48	■□□□□ 0.07
RNA5S13-201	ENST00000365656	KNDC1	Q76NI1	1749 aa		15.47	■□□□□ 0.07
RNA5S13-201	ENST00000365656	PCGF6	Q9BYE7	350 aa		15.47	■□□□□ 0.07
RNA5S13-201	ENST00000365656	BRINP3	Q76B58	766 aa		15.46	■□□□□ 0.07
RNA5S13-201	ENST00000365656	SIRT1	Q96EB6	747 aa		15.45	■□□□□ 0.06
RNA5S13-201	ENST00000365656	NBPF1	Q3BBV0	1214 aa		15.44	■□□□□ 0.06
RNA5S13-201	ENST00000365656	PRAM1	Q96QH2	718 aa		15.44	■□□□□ 0.06
RNA5S13-201	ENST00000365656	C1orf167	Q5SNV9	1468 aa		15.44	■□□□□ 0.06

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