RNA–Protein interactions for RNA: ENST00000360453.8

PPARGC1B-202, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPARGC1B, Length 3,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-202ENST00000360453 WDR7Q9Y4E6 1490 aa17.52■□□□□ 0.4
PPARGC1B-202ENST00000360453 IGHDP01880 384 aa17.52■□□□□ 0.4
PPARGC1B-202ENST00000360453 FAM161AQ3B820 660 aa17.52■□□□□ 0.4
PPARGC1B-202ENST00000360453 FRAT2O75474 233 aaPredicted RBP17.52■□□□□ 0.39
PPARGC1B-202ENST00000360453 CFAP70Q5T0N1 1121 aa17.52■□□□□ 0.39
PPARGC1B-202ENST00000360453 PANK1Q8TE04 598 aa17.52■□□□□ 0.39
PPARGC1B-202ENST00000360453 FRAT1Q92837 279 aaPredicted RBP17.52■□□□□ 0.39
PPARGC1B-202ENST00000360453 BCL2L13Q9BXK5 485 aa17.5■□□□□ 0.39
PPARGC1B-202ENST00000360453 COG6Q9Y2V7 657 aa17.5■□□□□ 0.39
PPARGC1B-202ENST00000360453 MYO5CQ9NQX4 1742 aa17.5■□□□□ 0.39
PPARGC1B-202ENST00000360453 CANXP27824 592 aaKnown RBP17.49■□□□□ 0.39
PPARGC1B-202ENST00000360453 ZNF521Q96K83 1311 aa17.49■□□□□ 0.39
PPARGC1B-202ENST00000360453 SEC24BO95487 1268 aa17.48■□□□□ 0.39
PPARGC1B-202ENST00000360453 USP35Q9P2H5 1018 aa17.48■□□□□ 0.39
PPARGC1B-202ENST00000360453 GSE1Q14687 1217 aa17.48■□□□□ 0.39
PPARGC1B-202ENST00000360453 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.48■□□□□ 0.39
PPARGC1B-202ENST00000360453 TNNQ9UQP3 1299 aa17.48■□□□□ 0.39
PPARGC1B-202ENST00000360453 PREX2Q70Z35 1606 aa17.48■□□□□ 0.39
PPARGC1B-202ENST00000360453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.48■□□□□ 0.392e-6■■■■□ 25
PPARGC1B-202ENST00000360453 CHGAP10645 457 aaKnown RBP17.47■□□□□ 0.39
PPARGC1B-202ENST00000360453 TRAPPC8Q9Y2L5 1435 aa17.46■□□□□ 0.39
PPARGC1B-202ENST00000360453 CARD14Q9BXL6 1004 aa17.46■□□□□ 0.39
PPARGC1B-202ENST00000360453 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
PPARGC1B-202ENST00000360453 CLUAP1Q96AJ1 413 aa17.45■□□□□ 0.38
PPARGC1B-202ENST00000360453 ARXQ96QS3 562 aa17.45■□□□□ 0.38
PPARGC1B-202ENST00000360453 SLKQ9H2G2 1235 aaPredicted RBP17.44■□□□□ 0.38
PPARGC1B-202ENST00000360453 KIF3BO15066 747 aa17.43■□□□□ 0.38
PPARGC1B-202ENST00000360453 EFCAB2Q5VUJ9 269 aa17.43■□□□□ 0.38
PPARGC1B-202ENST00000360453 SPAG9O60271 1321 aaKnown RBP17.43■□□□□ 0.38
PPARGC1B-202ENST00000360453 ADGRF5Q8IZF2 1346 aa17.42■□□□□ 0.38
PPARGC1B-202ENST00000360453 UNC13BO14795 1591 aa17.42■□□□□ 0.38
PPARGC1B-202ENST00000360453 SPRYD3Q8NCJ5 442 aa17.41■□□□□ 0.38
PPARGC1B-202ENST00000360453 NUTM2DQ5VT03 806 aaPredicted RBP17.41■□□□□ 0.38
PPARGC1B-202ENST00000360453 CDCA8Q53HL2 280 aa17.4■□□□□ 0.38
PPARGC1B-202ENST00000360453 TRAK1Q9UPV9 953 aa17.39■□□□□ 0.38
PPARGC1B-202ENST00000360453 IQGAP3Q86VI3 1631 aa17.39■□□□□ 0.37
PPARGC1B-202ENST00000360453 ASXL1Q8IXJ9 1541 aa17.38■□□□□ 0.37
PPARGC1B-202ENST00000360453 EIF2AK4Q9P2K8 1649 aaKnown RBP17.38■□□□□ 0.37
PPARGC1B-202ENST00000360453 TRMT2AQ8IZ69 625 aaKnown RBP17.38■□□□□ 0.37
PPARGC1B-202ENST00000360453 SLC12A5Q9H2X9 1139 aa17.38■□□□□ 0.37
PPARGC1B-202ENST00000360453 CENPJQ9HC77 1338 aaPredicted RBP17.38■□□□□ 0.37
PPARGC1B-202ENST00000360453 E9PSI1 815 aa17.37■□□□□ 0.37
PPARGC1B-202ENST00000360453 WWC1Q8IX03 1113 aa17.37■□□□□ 0.37
PPARGC1B-202ENST00000360453 NKTRP30414 1462 aaKnown RBP17.37■□□□□ 0.37
PPARGC1B-202ENST00000360453 SCAF11Q99590 1463 aaKnown RBP17.37■□□□□ 0.37
PPARGC1B-202ENST00000360453 TMEM132EQ6IEE7 984 aa17.37■□□□□ 0.37
PPARGC1B-202ENST00000360453 DUOX2Q9NRD8 1548 aa17.37■□□□□ 0.37
PPARGC1B-202ENST00000360453 UGGT1Q9NYU2 1555 aa17.37■□□□□ 0.37
PPARGC1B-202ENST00000360453 MAST1Q9Y2H9 1570 aa17.36■□□□□ 0.37
PPARGC1B-202ENST00000360453 RLBP1P12271 317 aa17.36■□□□□ 0.37
PPARGC1B-202ENST00000360453 USP19O94966 1318 aa17.35■□□□□ 0.37
PPARGC1B-202ENST00000360453 ATP10AO60312 1499 aa17.35■□□□□ 0.37
PPARGC1B-202ENST00000360453 SAFB2Q14151 953 aaKnown RBP eCLIP17.34■□□□□ 0.37
PPARGC1B-202ENST00000360453 MORC1Q86VD1 984 aa17.34■□□□□ 0.37
PPARGC1B-202ENST00000360453 INSRP06213 1382 aa17.34■□□□□ 0.37
PPARGC1B-202ENST00000360453 POGKQ9P215 609 aa17.34■□□□□ 0.37
PPARGC1B-202ENST00000360453 MADDQ8WXG6 1647 aa17.34■□□□□ 0.37
PPARGC1B-202ENST00000360453 PCDHB15Q9Y5E8 787 aa17.33■□□□□ 0.37
PPARGC1B-202ENST00000360453 LAMC1P11047 1609 aa17.33■□□□□ 0.36
PPARGC1B-202ENST00000360453 TCP11L2Q8N4U5 519 aa17.32■□□□□ 0.36
PPARGC1B-202ENST00000360453 PIK3C2GO75747 1445 aa17.32■□□□□ 0.36
PPARGC1B-202ENST00000360453 PLCH2O75038 1416 aa17.31■□□□□ 0.36
PPARGC1B-202ENST00000360453 RNF17Q9BXT8 1623 aaKnown RBP17.31■□□□□ 0.36
PPARGC1B-202ENST00000360453 EIF3AQ14152 1382 aaKnown RBP17.29■□□□□ 0.36
PPARGC1B-202ENST00000360453 CLTCL1P53675 1640 aa17.29■□□□□ 0.36
PPARGC1B-202ENST00000360453 EIF5BO60841 1220 aaKnown RBP17.29■□□□□ 0.36
PPARGC1B-202ENST00000360453 MTHFSP49914 203 aa17.29■□□□□ 0.36
PPARGC1B-202ENST00000360453 PLXNC1O60486 1568 aa17.29■□□□□ 0.36
PPARGC1B-202ENST00000360453 SCAPERQ9BY12 1400 aa17.28■□□□□ 0.36
PPARGC1B-202ENST00000360453 IQGAP1P46940 1657 aa17.28■□□□□ 0.36
PPARGC1B-202ENST00000360453 ERVK-7P63135 1459 aa17.28■□□□□ 0.36
PPARGC1B-202ENST00000360453 RARSP54136 660 aaKnown RBP17.28■□□□□ 0.36
PPARGC1B-202ENST00000360453 CGNL1Q0VF96 1302 aa17.27■□□□□ 0.36
PPARGC1B-202ENST00000360453 TSR2Q969E8 191 aaKnown RBP17.27■□□□□ 0.36
PPARGC1B-202ENST00000360453 SYNMO15061 1565 aa17.27■□□□□ 0.36
PPARGC1B-202ENST00000360453 PDZRN3Q9UPQ7 1066 aa17.27■□□□□ 0.35
PPARGC1B-202ENST00000360453 NSD3Q9BZ95 1437 aa17.26■□□□□ 0.35
PPARGC1B-202ENST00000360453 MYOM1P52179 1685 aa17.26■□□□□ 0.35
PPARGC1B-202ENST00000360453 CHD1O14646 1710 aa17.25■□□□□ 0.35
PPARGC1B-202ENST00000360453 PDE3AQ14432 1141 aa17.25■□□□□ 0.35
PPARGC1B-202ENST00000360453 U2AF1L5P0DN76 240 aaPredicted RBP17.25■□□□□ 0.35
PPARGC1B-202ENST00000360453 U2AF1Q01081 240 aaKnown RBP eCLIP17.25■□□□□ 0.35
PPARGC1B-202ENST00000360453 GGT6Q6P531 493 aa17.24■□□□□ 0.35
PPARGC1B-202ENST00000360453 ABCC2Q92887 1545 aa17.24■□□□□ 0.35
PPARGC1B-202ENST00000360453 CFAP65Q6ZU64 1925 aaKnown RBP17.24■□□□□ 0.35
PPARGC1B-202ENST00000360453 GZF1Q9H116 711 aaPredicted RBP17.24■□□□□ 0.35
PPARGC1B-202ENST00000360453 PRKCSHP14314 528 aaPredicted RBP17.23■□□□□ 0.35
PPARGC1B-202ENST00000360453 KANK1Q14678 1352 aa17.23■□□□□ 0.35
PPARGC1B-202ENST00000360453 RUNDC1Q96C34 613 aa17.23■□□□□ 0.35
PPARGC1B-202ENST00000360453 TRPM2O94759 1503 aa17.22■□□□□ 0.35
PPARGC1B-202ENST00000360453 ABCC1P33527 1531 aa17.21■□□□□ 0.35
PPARGC1B-202ENST00000360453 U2SURPO15042 1029 aaKnown RBP17.21■□□□□ 0.35
PPARGC1B-202ENST00000360453 CABP2Q9NPB3 220 aa17.2■□□□□ 0.34
PPARGC1B-202ENST00000360453 PTPRTO14522 1441 aa17.2■□□□□ 0.34
PPARGC1B-202ENST00000360453 NOS1P29475 1434 aa17.2■□□□□ 0.34
PPARGC1B-202ENST00000360453 KDM5AP29375 1690 aaKnown RBP17.2■□□□□ 0.34
PPARGC1B-202ENST00000360453 SPHKAPQ2M3C7 1700 aa17.2■□□□□ 0.34
PPARGC1B-202ENST00000360453 MFAP1P55081 439 aaKnown RBP17.2■□□□□ 0.34
PPARGC1B-202ENST00000360453 MAPK8IP3Q9UPT6 1336 aa17.19■□□□□ 0.34
PPARGC1B-202ENST00000360453 TBC1D2Q9BYX2 928 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms