RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 MCM5P33992 734 aa14.21□□□□□ -0.13
SEPSECS-201ENST00000358971 FHOD3Q2V2M9 1422 aa14.2□□□□□ -0.14
SEPSECS-201ENST00000358971 COG6Q9Y2V7 657 aa14.2□□□□□ -0.14
SEPSECS-201ENST00000358971 IRX3P78415 501 aaPredicted RBP14.2□□□□□ -0.14
SEPSECS-201ENST00000358971 ST20-MTHFSA0A0A6YYL1 179 aa14.2□□□□□ -0.14
SEPSECS-201ENST00000358971 PTMAP06454 111 aaKnown RBP14.2□□□□□ -0.14
SEPSECS-201ENST00000358971 CGNL1Q0VF96 1302 aa14.2□□□□□ -0.14
SEPSECS-201ENST00000358971 BIVM-ERCC5R4GMW8 1640 aa14.19□□□□□ -0.14
SEPSECS-201ENST00000358971 PLEKHH2Q8IVE3 1493 aa14.19□□□□□ -0.14
SEPSECS-201ENST00000358971 IRX5P78411 483 aaPredicted RBP14.19□□□□□ -0.14
SEPSECS-201ENST00000358971 RAB3GAP1Q15042 981 aa14.19□□□□□ -0.14
SEPSECS-201ENST00000358971 CCDC39Q9UFE4 941 aa14.19□□□□□ -0.14
SEPSECS-201ENST00000358971 ADAMTS8Q9UP79 889 aa14.19□□□□□ -0.14
SEPSECS-201ENST00000358971 BLMP54132 1417 aaPredicted RBP14.19□□□□□ -0.14
SEPSECS-201ENST00000358971 ZMYM4Q5VZL5 1548 aa14.19□□□□□ -0.14
SEPSECS-201ENST00000358971 CIZ1Q9ULV3 898 aaPredicted RBP14.18□□□□□ -0.14
SEPSECS-201ENST00000358971 PDZRN3Q9UPQ7 1066 aa14.18□□□□□ -0.14
SEPSECS-201ENST00000358971 PDLIM2Q96JY6 352 aa14.18□□□□□ -0.14
SEPSECS-201ENST00000358971 RBSNQ9H1K0 784 aa14.18□□□□□ -0.14
SEPSECS-201ENST00000358971 PARD3Q8TEW0 1356 aa14.18□□□□□ -0.14
SEPSECS-201ENST00000358971 KLHL40Q2TBA0 621 aa14.18□□□□□ -0.14
SEPSECS-201ENST00000358971 CAVIN1Q6NZI2 390 aaKnown RBP14.18□□□□□ -0.14
SEPSECS-201ENST00000358971 CERS3Q8IU89 383 aa14.18□□□□□ -0.14
SEPSECS-201ENST00000358971 SECISBP2LQ93073 1101 aaKnown RBP14.18□□□□□ -0.14
SEPSECS-201ENST00000358971 PDCL2Q8N4E4 241 aa14.17□□□□□ -0.14
SEPSECS-201ENST00000358971 PANK1Q8TE04 598 aa14.17□□□□□ -0.14
SEPSECS-201ENST00000358971 KIAA2012Q0VF49 1180 aa14.17□□□□□ -0.14
SEPSECS-201ENST00000358971 TEX2Q8IWB9 1127 aa14.17□□□□□ -0.14
SEPSECS-201ENST00000358971 HMGN5P82970 282 aaKnown RBP14.17□□□□□ -0.14
SEPSECS-201ENST00000358971 NBPF1Q3BBV0 1214 aa14.17□□□□□ -0.14
SEPSECS-201ENST00000358971 KIF3AQ9Y496 699 aa14.17□□□□□ -0.14
SEPSECS-201ENST00000358971 PLEKHH1Q9ULM0 1364 aa14.16□□□□□ -0.14
SEPSECS-201ENST00000358971 FYCO1Q9BQS8 1478 aa14.16□□□□□ -0.14
SEPSECS-201ENST00000358971 AEBP1Q8IUX7 1158 aa14.16□□□□□ -0.14
SEPSECS-201ENST00000358971 DDIT3P35638 169 aa14.15□□□□□ -0.14
SEPSECS-201ENST00000358971 WDR43Q15061 677 aaKnown RBP eCLIP14.15□□□□□ -0.14
SEPSECS-201ENST00000358971 KDM6BO15054 1643 aa14.15□□□□□ -0.14
SEPSECS-201ENST00000358971 PMFBP1Q8TBY8 1022 aa14.15□□□□□ -0.14
SEPSECS-201ENST00000358971 PRIMPOLQ96LW4 560 aa14.15□□□□□ -0.14
SEPSECS-201ENST00000358971 SMC5Q8IY18 1101 aa14.15□□□□□ -0.14
SEPSECS-201ENST00000358971 DNAJC2Q99543 621 aaKnown RBP14.15□□□□□ -0.14
SEPSECS-201ENST00000358971 IBTKQ9P2D0 1353 aaPredicted RBP14.14□□□□□ -0.15
SEPSECS-201ENST00000358971 CASKIN1Q8WXD9 1431 aa14.14□□□□□ -0.15
SEPSECS-201ENST00000358971 U2AF2P26368 475 aaKnown RBP eCLIP14.14□□□□□ -0.15
SEPSECS-201ENST00000358971 SSFA2P28290 1259 aa14.14□□□□□ -0.15
SEPSECS-201ENST00000358971 ZNF445P59923 1031 aa14.14□□□□□ -0.15
SEPSECS-201ENST00000358971 ZSCAN23Q3MJ62 389 aa14.14□□□□□ -0.15
SEPSECS-201ENST00000358971 PRIM1P49642 420 aaKnown RBP14.13□□□□□ -0.15
SEPSECS-201ENST00000358971 SLFN5Q08AF3 891 aa14.13□□□□□ -0.15
SEPSECS-201ENST00000358971 THOC2Q8NI27 1593 aaKnown RBP14.12□□□□□ -0.15
SEPSECS-201ENST00000358971 CARMIL1Q5VZK9 1371 aa14.12□□□□□ -0.15
SEPSECS-201ENST00000358971 RBM25P49756 843 aaKnown RBP14.12□□□□□ -0.15
SEPSECS-201ENST00000358971 PDE3AQ14432 1141 aa14.12□□□□□ -0.15
SEPSECS-201ENST00000358971 BCL2L12Q9HB09 334 aa14.12□□□□□ -0.15
SEPSECS-201ENST00000358971 IGF1RP08069 1367 aa14.11□□□□□ -0.15
SEPSECS-201ENST00000358971 KDM5CP41229 1560 aa14.11□□□□□ -0.15
SEPSECS-201ENST00000358971 MCTP1Q6DN14 999 aa14.11□□□□□ -0.15
SEPSECS-201ENST00000358971 DHX37Q8IY37 1157 aaKnown RBP14.11□□□□□ -0.15
SEPSECS-201ENST00000358971 RGS22Q8NE09 1264 aa14.11□□□□□ -0.15
SEPSECS-201ENST00000358971 BAG4O95429 457 aaKnown RBP14.1□□□□□ -0.15
SEPSECS-201ENST00000358971 MPNDQ8N594 471 aa14.1□□□□□ -0.15
SEPSECS-201ENST00000358971 NCOA3Q9Y6Q9 1424 aa14.1□□□□□ -0.15
SEPSECS-201ENST00000358971 INSRP06213 1382 aa14.1□□□□□ -0.15
SEPSECS-201ENST00000358971 CCDC66A2RUB6 948 aa14.1□□□□□ -0.15
SEPSECS-201ENST00000358971 KDM2AQ9Y2K7 1162 aa14.1□□□□□ -0.15
SEPSECS-201ENST00000358971 BRD2P25440 801 aaKnown RBP14.09□□□□□ -0.15
SEPSECS-201ENST00000358971 RNF214Q8ND24 703 aa14.09□□□□□ -0.15
SEPSECS-201ENST00000358971 PCDHB15Q9Y5E8 787 aa14.09□□□□□ -0.15
SEPSECS-201ENST00000358971 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.09□□□□□ -0.15
SEPSECS-201ENST00000358971 RTEL1-TNFRSF6BF6WH68 1400 aa14.09□□□□□ -0.15
SEPSECS-201ENST00000358971 GTF2F1P35269 517 aaKnown RBP eCLIP14.08□□□□□ -0.15
SEPSECS-201ENST00000358971 SNX21Q969T3 373 aa14.08□□□□□ -0.15
SEPSECS-201ENST00000358971 RWDD1Q9H446 243 aaPredicted RBP14.08□□□□□ -0.15
SEPSECS-201ENST00000358971 CFTRP13569 1480 aa14.08□□□□□ -0.16
SEPSECS-201ENST00000358971 TIGD1Q96MW7 591 aa14.08□□□□□ -0.16
SEPSECS-201ENST00000358971 SPINK5Q9NQ38 1064 aaPredicted RBP14.08□□□□□ -0.16
SEPSECS-201ENST00000358971 VGFO15240 615 aaPredicted RBP14.08□□□□□ -0.16
SEPSECS-201ENST00000358971 GCC2Q8IWJ2 1684 aa14.07□□□□□ -0.16
SEPSECS-201ENST00000358971 PER1O15534 1290 aaPredicted RBP14.07□□□□□ -0.16
SEPSECS-201ENST00000358971 TRIM6-TRIM34B2RNG4 842 aa14.07□□□□□ -0.16
SEPSECS-201ENST00000358971 TRIM34Q9BYJ4 488 aa14.07□□□□□ -0.16
SEPSECS-201ENST00000358971 KIF21AQ7Z4S6 1674 aa14.07□□□□□ -0.16
SEPSECS-201ENST00000358971 CCDC146Q8IYE0 955 aa14.07□□□□□ -0.16
SEPSECS-201ENST00000358971 ZNF521Q96K83 1311 aa14.06□□□□□ -0.16
SEPSECS-201ENST00000358971 CHRM1P11229 460 aaPredicted RBP14.06□□□□□ -0.16
SEPSECS-201ENST00000358971 NOLC1Q14978 699 aaKnown RBP eCLIP14.06□□□□□ -0.16
SEPSECS-201ENST00000358971 ZMYM3Q14202 1370 aa14.06□□□□□ -0.16
SEPSECS-201ENST00000358971 RBM27Q9P2N5 1060 aaKnown RBP14.06□□□□□ -0.16
SEPSECS-201ENST00000358971 NKTRP30414 1462 aaKnown RBP14.06□□□□□ -0.16
SEPSECS-201ENST00000358971 SCAPERQ9BY12 1400 aa14.06□□□□□ -0.16
SEPSECS-201ENST00000358971 SLC20A2Q08357 652 aa14.05□□□□□ -0.16
SEPSECS-201ENST00000358971 ZBTB9Q96C00 473 aa14.05□□□□□ -0.16
SEPSECS-201ENST00000358971 FEZ1Q99689 392 aa14.05□□□□□ -0.16
SEPSECS-201ENST00000358971 OGFRQ9NZT2 677 aa14.05□□□□□ -0.16
SEPSECS-201ENST00000358971 C17orf53Q8N3J3 647 aaPredicted RBP14.04□□□□□ -0.16
SEPSECS-201ENST00000358971 FGD5Q6ZNL6 1462 aa14.04□□□□□ -0.16
SEPSECS-201ENST00000358971 SYCE3A1L190 88 aa14.04□□□□□ -0.16
SEPSECS-201ENST00000358971 GABPB1Q06547 395 aaPredicted RBP14.04□□□□□ -0.16
SEPSECS-201ENST00000358971 CHAF1AQ13111 956 aaPredicted RBP14.03□□□□□ -0.16
SEPSECS-201ENST00000358971 TRERF1Q96PN7 1200 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms