RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 CPS1P31327 1500 aa25.38■■□□□ 1.65
FAM3D-201ENST00000358781 RAB3GAP2Q9H2M9 1393 aa25.38■■□□□ 1.65
FAM3D-201ENST00000358781 HDGFP51858 240 aaKnown RBP25.37■■□□□ 1.65
FAM3D-201ENST00000358781 MPHOSPH9Q99550 1183 aa25.37■■□□□ 1.65
FAM3D-201ENST00000358781 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.36■■□□□ 1.65
FAM3D-201ENST00000358781 STRCP1A6NGW2 1772 aa25.35■■□□□ 1.65
FAM3D-201ENST00000358781 PLEKHG1Q9ULL1 1385 aa25.34■■□□□ 1.65
FAM3D-201ENST00000358781 PPP1R15AO75807 674 aaPredicted RBP25.34■■□□□ 1.65
FAM3D-201ENST00000358781 FOXD1Q16676 465 aa25.33■■□□□ 1.64
FAM3D-201ENST00000358781 KIF1BO60333 1816 aa25.32■■□□□ 1.64
FAM3D-201ENST00000358781 SLC26A8Q96RN1 970 aa25.31■■□□□ 1.64
FAM3D-201ENST00000358781 BCANQ96GW7 911 aa25.3■■□□□ 1.64
FAM3D-201ENST00000358781 NUTM2DQ5VT03 806 aaPredicted RBP25.29■■□□□ 1.64
FAM3D-201ENST00000358781 ZNF326Q5BKZ1 582 aaKnown RBP25.28■■□□□ 1.64
FAM3D-201ENST00000358781 SENP3Q9H4L4 574 aaPredicted RBP25.27■■□□□ 1.64
FAM3D-201ENST00000358781 HRCP23327 699 aa25.26■■□□□ 1.63
FAM3D-201ENST00000358781 LRRC7Q96NW7 1537 aa25.25■■□□□ 1.63
FAM3D-201ENST00000358781 NEXMIFQ5QGS0 1516 aa25.23■■□□□ 1.63
FAM3D-201ENST00000358781 CCDC144AA2RUR9 1427 aa25.23■■□□□ 1.63
FAM3D-201ENST00000358781 KCNA6P17658 529 aa25.22■■□□□ 1.63
FAM3D-201ENST00000358781 TBX22Q9Y458 520 aa25.22■■□□□ 1.63
FAM3D-201ENST00000358781 ADAMTS13Q76LX8 1427 aa25.22■■□□□ 1.63
FAM3D-201ENST00000358781 DIP2AQ14689 1571 aa25.21■■□□□ 1.63
FAM3D-201ENST00000358781 UBAP1LF5GYI3 381 aa25.19■■□□□ 1.62
FAM3D-201ENST00000358781 NWD1Q149M9 1564 aa25.19■■□□□ 1.62
FAM3D-201ENST00000358781 SETBP1Q9Y6X0 1596 aa25.18■■□□□ 1.62
FAM3D-201ENST00000358781 CHD2O14647 1828 aaKnown RBP25.18■■□□□ 1.62
FAM3D-201ENST00000358781 RPGRIP1LQ68CZ1 1315 aa25.17■■□□□ 1.62
FAM3D-201ENST00000358781 NRXN3Q9Y4C0 1643 aa25.16■■□□□ 1.62
FAM3D-201ENST00000358781 NKTRP30414 1462 aaKnown RBP25.15■■□□□ 1.62
FAM3D-201ENST00000358781 XIRP1Q702N8 1843 aaKnown RBP25.15■■□□□ 1.62
FAM3D-201ENST00000358781 SPATA31E1Q6ZUB1 1445 aa25.14■■□□□ 1.62
FAM3D-201ENST00000358781 PIK3R4Q99570 1358 aa25.14■■□□□ 1.61
FAM3D-201ENST00000358781 PPLO60437 1756 aa25.13■■□□□ 1.61
FAM3D-201ENST00000358781 VGFO15240 615 aaPredicted RBP25.12■■□□□ 1.61
FAM3D-201ENST00000358781 TOM1O60784 492 aa25.12■■□□□ 1.61
FAM3D-201ENST00000358781 TMEM94Q12767 1356 aa25.11■■□□□ 1.61
FAM3D-201ENST00000358781 PROSER2Q86WR7 435 aaPredicted RBP25.11■■□□□ 1.61
FAM3D-201ENST00000358781 ANKRD30BQ9BXX2 1392 aa25.08■■□□□ 1.61
FAM3D-201ENST00000358781 ALKQ9UM73 1620 aa25.08■■□□□ 1.61
FAM3D-201ENST00000358781 RGL3Q3MIN7 710 aa25.08■■□□□ 1.6
FAM3D-201ENST00000358781 PTPRUQ92729 1446 aa25.06■■□□□ 1.6
FAM3D-201ENST00000358781 IFT172Q9UG01 1749 aa25.05■■□□□ 1.6
FAM3D-201ENST00000358781 RBM33Q96EV2 1170 aaKnown RBP25.05■■□□□ 1.6
FAM3D-201ENST00000358781 METP08581 1390 aa25.05■■□□□ 1.6
FAM3D-201ENST00000358781 PIP4K2BP78356 416 aa25.04■■□□□ 1.6
FAM3D-201ENST00000358781 AMOTL2Q9Y2J4 779 aa25.04■■□□□ 1.6
FAM3D-201ENST00000358781 XRN1Q8IZH2 1706 aaKnown RBP25.02■■□□□ 1.6
FAM3D-201ENST00000358781 SETD1AO15047 1707 aaKnown RBP25.01■■□□□ 1.59
FAM3D-201ENST00000358781 SCAF1Q9H7N4 1312 aaKnown RBP25.01■■□□□ 1.59
FAM3D-201ENST00000358781 ADGRF5Q8IZF2 1346 aa25■■□□□ 1.59
FAM3D-201ENST00000358781 NCOA3Q9Y6Q9 1424 aa24.99■■□□□ 1.59
FAM3D-201ENST00000358781 MSH6P52701 1360 aa24.97■■□□□ 1.59
FAM3D-201ENST00000358781 TRIM26Q12899 539 aaPredicted RBP24.95■■□□□ 1.58
FAM3D-201ENST00000358781 PIK3C2GO75747 1445 aa24.93■■□□□ 1.58
FAM3D-201ENST00000358781 MYOM2P54296 1465 aa24.92■■□□□ 1.58
FAM3D-201ENST00000358781 C14orf37Q86TY3 774 aa24.91■■□□□ 1.58
FAM3D-201ENST00000358781 NRXN1Q9ULB1 1477 aa24.9■■□□□ 1.58
FAM3D-201ENST00000358781 HSPA1LP34931 641 aa24.89■■□□□ 1.58
FAM3D-201ENST00000358781 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.89■■□□□ 1.57
FAM3D-201ENST00000358781 C19orf44Q9H6X5 657 aa24.88■■□□□ 1.57
FAM3D-201ENST00000358781 PRAG1Q86YV5 1406 aa24.88■■□□□ 1.57
FAM3D-201ENST00000358781 PTCH1Q13635 1447 aa24.87■■□□□ 1.57
FAM3D-201ENST00000358781 FAM135BQ49AJ0 1406 aa24.86■■□□□ 1.57
FAM3D-201ENST00000358781 ROBO2Q9HCK4 1378 aa24.85■■□□□ 1.57
FAM3D-201ENST00000358781 SLAIN2Q9P270 581 aa24.85■■□□□ 1.57
FAM3D-201ENST00000358781 ASXL1Q8IXJ9 1541 aa24.84■■□□□ 1.57
FAM3D-201ENST00000358781 C14orf93Q9H972 538 aaKnown RBP24.84■■□□□ 1.57
FAM3D-201ENST00000358781 ATF3P18847 181 aa24.83■■□□□ 1.56
FAM3D-201ENST00000358781 CADPS2Q86UW7 1296 aa24.83■■□□□ 1.56
FAM3D-201ENST00000358781 LAMC1P11047 1609 aa24.82■■□□□ 1.56
FAM3D-201ENST00000358781 ROBO1Q9Y6N7 1651 aa24.82■■□□□ 1.56
FAM3D-201ENST00000358781 DCCP43146 1447 aa24.82■■□□□ 1.56
FAM3D-201ENST00000358781 DCAF11Q8TEB1 546 aa24.82■■□□□ 1.56
FAM3D-201ENST00000358781 DHX57Q6P158 1386 aaKnown RBP24.81■■□□□ 1.56
FAM3D-201ENST00000358781 ADGRL3Q9HAR2 1447 aa24.81■■□□□ 1.56
FAM3D-201ENST00000358781 NALCNQ8IZF0 1738 aa24.81■■□□□ 1.56
FAM3D-201ENST00000358781 TMEM132EQ6IEE7 984 aa24.81■■□□□ 1.56
FAM3D-201ENST00000358781 STAC3Q96MF2 364 aa24.81■■□□□ 1.56
FAM3D-201ENST00000358781 LRPPRCP42704 1394 aaKnown RBP24.81■■□□□ 1.56
FAM3D-201ENST00000358781 CFAP70Q5T0N1 1121 aa24.8■■□□□ 1.56
FAM3D-201ENST00000358781 KDM2AQ9Y2K7 1162 aa24.8■■□□□ 1.56
FAM3D-201ENST00000358781 TECPR2O15040 1411 aa24.79■■□□□ 1.56
FAM3D-201ENST00000358781 ABCC11Q96J66 1382 aa24.78■■□□□ 1.56
FAM3D-201ENST00000358781 STK26Q9P289 416 aa24.78■■□□□ 1.56
FAM3D-201ENST00000358781 KNDC1Q76NI1 1749 aa24.77■■□□□ 1.56
FAM3D-201ENST00000358781 YTHDC2Q9H6S0 1430 aaKnown RBP24.77■■□□□ 1.56
FAM3D-201ENST00000358781 MST1RQ04912 1400 aa24.72■■□□□ 1.55
FAM3D-201ENST00000358781 ADGRB1O14514 1584 aa24.7■■□□□ 1.54
FAM3D-201ENST00000358781 WAPLQ7Z5K2 1190 aa24.7■■□□□ 1.54
FAM3D-201ENST00000358781 SIRT1Q96EB6 747 aa24.69■■□□□ 1.54
FAM3D-201ENST00000358781 SIN3AQ96ST3 1273 aa24.69■■□□□ 1.54
FAM3D-201ENST00000358781 PHLPP1O60346 1717 aa24.67■■□□□ 1.54
FAM3D-201ENST00000358781 BRINP3Q76B58 766 aa24.67■■□□□ 1.54
FAM3D-201ENST00000358781 PLEKHH1Q9ULM0 1364 aa24.67■■□□□ 1.54
FAM3D-201ENST00000358781 CDC42BPGQ6DT37 1551 aa24.65■■□□□ 1.54
FAM3D-201ENST00000358781 AHDC1Q5TGY3 1603 aaPredicted RBP24.64■■□□□ 1.54
FAM3D-201ENST00000358781 DLC1Q96QB1 1528 aa24.64■■□□□ 1.54
FAM3D-201ENST00000358781 C1orf167Q5SNV9 1468 aa24.64■■□□□ 1.53
FAM3D-201ENST00000358781 NEUROD1Q13562 356 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms