RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 SLC4A1APQ9BWU0 796 aaKnown RBP30.42■■■□□ 2.46
CHRD-203ENST00000356534 RIMS2Q9UQ26 1411 aa30.4■■■□□ 2.46
CHRD-203ENST00000356534 CHGAP10645 457 aaKnown RBP30.39■■■□□ 2.46
CHRD-203ENST00000356534 STRCP1A6NGW2 1772 aa30.38■■■□□ 2.45
CHRD-203ENST00000356534 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.37■■■□□ 2.45
CHRD-203ENST00000356534 PLEKHG1Q9ULL1 1385 aa30.34■■■□□ 2.45
CHRD-203ENST00000356534 PPP1R15AO75807 674 aaPredicted RBP30.34■■■□□ 2.45
CHRD-203ENST00000356534 DIP2AQ14689 1571 aa30.32■■■□□ 2.45
CHRD-203ENST00000356534 RAB3GAP2Q9H2M9 1393 aa30.3■■■□□ 2.44
CHRD-203ENST00000356534 CHD2O14647 1828 aaKnown RBP30.27■■■□□ 2.44
CHRD-203ENST00000356534 NWD1Q149M9 1564 aa30.26■■■□□ 2.43
CHRD-203ENST00000356534 BCANQ96GW7 911 aa30.25■■■□□ 2.43
CHRD-203ENST00000356534 MPHOSPH9Q99550 1183 aa30.25■■■□□ 2.43
CHRD-203ENST00000356534 NEXMIFQ5QGS0 1516 aa30.23■■■□□ 2.43
CHRD-203ENST00000356534 CCDC144AA2RUR9 1427 aa30.22■■■□□ 2.43
CHRD-203ENST00000356534 ZNF326Q5BKZ1 582 aaKnown RBP30.22■■■□□ 2.43
CHRD-203ENST00000356534 XIRP1Q702N8 1843 aaKnown RBP30.22■■■□□ 2.43
CHRD-203ENST00000356534 LRRC7Q96NW7 1537 aa30.22■■■□□ 2.43
CHRD-203ENST00000356534 PPLO60437 1756 aa30.21■■■□□ 2.43
CHRD-203ENST00000356534 NKTRP30414 1462 aaKnown RBP30.21■■■□□ 2.43
CHRD-203ENST00000356534 HRCP23327 699 aa30.2■■■□□ 2.43
CHRD-203ENST00000356534 SETBP1Q9Y6X0 1596 aa30.2■■■□□ 2.42
CHRD-203ENST00000356534 SLC26A8Q96RN1 970 aa30.18■■■□□ 2.42
CHRD-203ENST00000356534 NRXN3Q9Y4C0 1643 aa30.16■■■□□ 2.42
CHRD-203ENST00000356534 KCNA6P17658 529 aa30.15■■■□□ 2.42
CHRD-203ENST00000356534 PIK3R4Q99570 1358 aa30.15■■■□□ 2.42
CHRD-203ENST00000356534 ADAMTS13Q76LX8 1427 aa30.14■■■□□ 2.42
CHRD-203ENST00000356534 TBX22Q9Y458 520 aa30.14■■■□□ 2.42
CHRD-203ENST00000356534 FOXD1Q16676 465 aa30.13■■■□□ 2.41
CHRD-203ENST00000356534 RPGRIP1LQ68CZ1 1315 aa30.13■■■□□ 2.41
CHRD-203ENST00000356534 IFT172Q9UG01 1749 aa30.13■■■□□ 2.41
CHRD-203ENST00000356534 UBAP1LF5GYI3 381 aa30.12■■■□□ 2.41
CHRD-203ENST00000356534 NUTM2DQ5VT03 806 aaPredicted RBP30.12■■■□□ 2.41
CHRD-203ENST00000356534 TOM1O60784 492 aa30.1■■■□□ 2.41
CHRD-203ENST00000356534 VGFO15240 615 aaPredicted RBP30.05■■■□□ 2.4
CHRD-203ENST00000356534 SETD1AO15047 1707 aaKnown RBP30.04■■■□□ 2.4
CHRD-203ENST00000356534 XRN1Q8IZH2 1706 aaKnown RBP30.04■■■□□ 2.4
CHRD-203ENST00000356534 SPATA31E1Q6ZUB1 1445 aa30.04■■■□□ 2.4
CHRD-203ENST00000356534 SENP3Q9H4L4 574 aaPredicted RBP30.03■■■□□ 2.4
CHRD-203ENST00000356534 TMEM94Q12767 1356 aa30.02■■■□□ 2.4
CHRD-203ENST00000356534 PROSER2Q86WR7 435 aaPredicted RBP30.01■■■□□ 2.39
CHRD-203ENST00000356534 ANKRD30BQ9BXX2 1392 aa29.99■■■□□ 2.39
CHRD-203ENST00000356534 ALKQ9UM73 1620 aa29.99■■■□□ 2.39
CHRD-203ENST00000356534 NCOA3Q9Y6Q9 1424 aa29.98■■■□□ 2.39
CHRD-203ENST00000356534 MSH6P52701 1360 aa29.94■■■□□ 2.38
CHRD-203ENST00000356534 SCAF1Q9H7N4 1312 aaKnown RBP29.93■■■□□ 2.38
CHRD-203ENST00000356534 PTPRUQ92729 1446 aa29.91■■■□□ 2.38
CHRD-203ENST00000356534 LAMC1P11047 1609 aa29.91■■■□□ 2.38
CHRD-203ENST00000356534 RGL3Q3MIN7 710 aa29.9■■■□□ 2.38
CHRD-203ENST00000356534 AMOTL2Q9Y2J4 779 aa29.9■■■□□ 2.38
CHRD-203ENST00000356534 PIP4K2BP78356 416 aa29.89■■■□□ 2.38
CHRD-203ENST00000356534 MYOM2P54296 1465 aa29.88■■■□□ 2.37
CHRD-203ENST00000356534 METP08581 1390 aa29.88■■■□□ 2.37
CHRD-203ENST00000356534 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.88■■■□□ 2.37
CHRD-203ENST00000356534 PRAG1Q86YV5 1406 aa29.85■■■□□ 2.37
CHRD-203ENST00000356534 KNDC1Q76NI1 1749 aa29.83■■■□□ 2.37
CHRD-203ENST00000356534 PIK3C2GO75747 1445 aa29.83■■■□□ 2.37
CHRD-203ENST00000356534 PTCH1Q13635 1447 aa29.83■■■□□ 2.37
CHRD-203ENST00000356534 C14orf37Q86TY3 774 aa29.82■■■□□ 2.36
CHRD-203ENST00000356534 ROBO1Q9Y6N7 1651 aa29.81■■■□□ 2.36
CHRD-203ENST00000356534 NRXN1Q9ULB1 1477 aa29.8■■■□□ 2.36
CHRD-203ENST00000356534 DCCP43146 1447 aa29.8■■■□□ 2.36
CHRD-203ENST00000356534 ADGRF5Q8IZF2 1346 aa29.8■■■□□ 2.36
CHRD-203ENST00000356534 RBM33Q96EV2 1170 aaKnown RBP29.79■■■□□ 2.36
CHRD-203ENST00000356534 NALCNQ8IZF0 1738 aa29.79■■■□□ 2.36
CHRD-203ENST00000356534 FAM135BQ49AJ0 1406 aa29.78■■■□□ 2.36
CHRD-203ENST00000356534 TRIM26Q12899 539 aaPredicted RBP29.77■■■□□ 2.36
CHRD-203ENST00000356534 STAC3Q96MF2 364 aa29.76■■■□□ 2.35
CHRD-203ENST00000356534 C19orf44Q9H6X5 657 aa29.76■■■□□ 2.35
CHRD-203ENST00000356534 CADPS2Q86UW7 1296 aa29.75■■■□□ 2.35
CHRD-203ENST00000356534 ADGRL3Q9HAR2 1447 aa29.74■■■□□ 2.35
CHRD-203ENST00000356534 ATF3P18847 181 aa29.72■■■□□ 2.35
CHRD-203ENST00000356534 ASXL1Q8IXJ9 1541 aa29.71■■■□□ 2.35
CHRD-203ENST00000356534 HSPA1LP34931 641 aa29.71■■■□□ 2.35
CHRD-203ENST00000356534 TECPR2O15040 1411 aa29.71■■■□□ 2.35
CHRD-203ENST00000356534 SLAIN2Q9P270 581 aa29.68■■■□□ 2.34
CHRD-203ENST00000356534 LRPPRCP42704 1394 aaKnown RBP29.67■■■□□ 2.34
CHRD-203ENST00000356534 PHLPP1O60346 1717 aa29.67■■■□□ 2.34
CHRD-203ENST00000356534 ROBO2Q9HCK4 1378 aa29.65■■■□□ 2.34
CHRD-203ENST00000356534 C14orf93Q9H972 538 aaKnown RBP29.64■■■□□ 2.34
CHRD-203ENST00000356534 ABCC11Q96J66 1382 aa29.64■■■□□ 2.33
CHRD-203ENST00000356534 YTHDC2Q9H6S0 1430 aaKnown RBP29.63■■■□□ 2.33
CHRD-203ENST00000356534 KIAA1210Q9ULL0 1709 aa29.62■■■□□ 2.33
CHRD-203ENST00000356534 DCAF11Q8TEB1 546 aa29.62■■■□□ 2.33
CHRD-203ENST00000356534 DHX57Q6P158 1386 aaKnown RBP29.62■■■□□ 2.33
CHRD-203ENST00000356534 CDC42BPGQ6DT37 1551 aa29.61■■■□□ 2.33
CHRD-203ENST00000356534 MST1RQ04912 1400 aa29.59■■■□□ 2.33
CHRD-203ENST00000356534 AHDC1Q5TGY3 1603 aaPredicted RBP29.59■■■□□ 2.33
CHRD-203ENST00000356534 DLC1Q96QB1 1528 aa29.57■■■□□ 2.32
CHRD-203ENST00000356534 CFAP70Q5T0N1 1121 aa29.56■■■□□ 2.32
CHRD-203ENST00000356534 KDM2AQ9Y2K7 1162 aa29.56■■■□□ 2.32
CHRD-203ENST00000356534 ADGRB1O14514 1584 aa29.56■■■□□ 2.32
CHRD-203ENST00000356534 TMEM132EQ6IEE7 984 aa29.55■■■□□ 2.32
CHRD-203ENST00000356534 STK26Q9P289 416 aa29.55■■■□□ 2.32
CHRD-203ENST00000356534 NHSL1Q5SYE7 1610 aa29.55■■■□□ 2.32
CHRD-203ENST00000356534 COL16A1Q07092 1604 aaPredicted RBP29.53■■■□□ 2.32
CHRD-203ENST00000356534 MED1Q15648 1581 aaPredicted RBP29.53■■■□□ 2.32
CHRD-203ENST00000356534 SIRT1Q96EB6 747 aa29.53■■■□□ 2.32
CHRD-203ENST00000356534 FMN2Q9NZ56 1722 aa29.5■■■□□ 2.31
CHRD-203ENST00000356534 ARHGEF28Q8N1W1 1705 aaKnown RBP29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms