RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 SAMD9LQ8IVG5 1584 aa19.67■□□□□ 0.74
VAT1-201ENST00000355653 MAGI2Q86UL8 1455 aa19.67■□□□□ 0.74
VAT1-201ENST00000355653 PLA2R1Q13018 1463 aa19.67■□□□□ 0.74
VAT1-201ENST00000355653 ARHGEF5Q12774 1597 aa19.67■□□□□ 0.74
VAT1-201ENST00000355653 APAF1O14727 1248 aa19.67■□□□□ 0.74
VAT1-201ENST00000355653 RSPH4AQ5TD94 716 aa19.65■□□□□ 0.74
VAT1-201ENST00000355653 USP19O94966 1318 aa19.65■□□□□ 0.74
VAT1-201ENST00000355653 CANXP27824 592 aaKnown RBP19.64■□□□□ 0.73
VAT1-201ENST00000355653 AMER1Q5JTC6 1135 aaPredicted RBP19.64■□□□□ 0.73
VAT1-201ENST00000355653 RSPH6AQ9H0K4 717 aa19.64■□□□□ 0.73
VAT1-201ENST00000355653 EIF3AQ14152 1382 aaKnown RBP19.64■□□□□ 0.73
VAT1-201ENST00000355653 BECN1Q14457 450 aa19.63■□□□□ 0.73
VAT1-201ENST00000355653 WDR7Q9Y4E6 1490 aa19.62■□□□□ 0.73
VAT1-201ENST00000355653 CDC42BPBQ9Y5S2 1711 aa19.62■□□□□ 0.73
VAT1-201ENST00000355653 SYCP2Q9BX26 1530 aa19.62■□□□□ 0.73
VAT1-201ENST00000355653 NKTRP30414 1462 aaKnown RBP19.62■□□□□ 0.73
VAT1-201ENST00000355653 MYO5CQ9NQX4 1742 aa19.62■□□□□ 0.73
VAT1-201ENST00000355653 LAMC1P11047 1609 aa19.61■□□□□ 0.73
VAT1-201ENST00000355653 COG6Q9Y2V7 657 aa19.61■□□□□ 0.73
VAT1-201ENST00000355653 PANK1Q8TE04 598 aa19.6■□□□□ 0.73
VAT1-201ENST00000355653 DMRT2Q9Y5R5 561 aa19.6■□□□□ 0.73
VAT1-201ENST00000355653 EIF2AK4Q9P2K8 1649 aaKnown RBP19.59■□□□□ 0.73
VAT1-201ENST00000355653 TRMT2AQ8IZ69 625 aaKnown RBP19.59■□□□□ 0.73
VAT1-201ENST00000355653 ARHGAP5Q13017 1502 aa19.59■□□□□ 0.73
VAT1-201ENST00000355653 E9PSI1 815 aa19.57■□□□□ 0.72
VAT1-201ENST00000355653 CLUAP1Q96AJ1 413 aa19.57■□□□□ 0.72
VAT1-201ENST00000355653 PREX2Q70Z35 1606 aa19.57■□□□□ 0.72
VAT1-201ENST00000355653 MAPK8IP3Q9UPT6 1336 aa19.56■□□□□ 0.72
VAT1-201ENST00000355653 RRAGDQ9NQL2 400 aaPredicted RBP19.56■□□□□ 0.72
VAT1-201ENST00000355653 CGNL1Q0VF96 1302 aa19.56■□□□□ 0.72
VAT1-201ENST00000355653 SPRYD3Q8NCJ5 442 aa19.56■□□□□ 0.72
VAT1-201ENST00000355653 CENPJQ9HC77 1338 aaPredicted RBP19.54■□□□□ 0.72
VAT1-201ENST00000355653 TTC37Q6PGP7 1564 aa19.54■□□□□ 0.72
VAT1-201ENST00000355653 CLASP1Q7Z460 1538 aa19.54■□□□□ 0.72
VAT1-201ENST00000355653 VIRMAQ69YN4 1812 aaKnown RBP19.53■□□□□ 0.72
VAT1-201ENST00000355653 L1TD1Q5T7N2 865 aaKnown RBP19.53■□□□□ 0.72
VAT1-201ENST00000355653 UPF2Q9HAU5 1272 aaKnown RBP19.53■□□□□ 0.72
VAT1-201ENST00000355653 CDCA8Q53HL2 280 aa19.53■□□□□ 0.72
VAT1-201ENST00000355653 ASXL1Q8IXJ9 1541 aa19.53■□□□□ 0.72
VAT1-201ENST00000355653 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.53■□□□□ 0.721e-6■■■□□ 17.1
VAT1-201ENST00000355653 PIK3C2GO75747 1445 aa19.53■□□□□ 0.72
VAT1-201ENST00000355653 NEUROD2Q15784 382 aa19.52■□□□□ 0.72
VAT1-201ENST00000355653 PDE3AQ14432 1141 aa19.52■□□□□ 0.71
VAT1-201ENST00000355653 GZF1Q9H116 711 aaPredicted RBP19.51■□□□□ 0.71
VAT1-201ENST00000355653 UNC13BO14795 1591 aa19.5■□□□□ 0.71
VAT1-201ENST00000355653 ANTXR1Q9H6X2 564 aa19.5■□□□□ 0.71
VAT1-201ENST00000355653 TBC1D2Q9BYX2 928 aa19.49■□□□□ 0.71
VAT1-201ENST00000355653 NLRP1Q9C000 1473 aa19.48■□□□□ 0.71
VAT1-201ENST00000355653 RNF17Q9BXT8 1623 aaKnown RBP19.48■□□□□ 0.71
VAT1-201ENST00000355653 SYNMO15061 1565 aa19.47■□□□□ 0.71
VAT1-201ENST00000355653 ABCC2Q92887 1545 aa19.47■□□□□ 0.71
VAT1-201ENST00000355653 BCL2L13Q9BXK5 485 aa19.47■□□□□ 0.71
VAT1-201ENST00000355653 RRP7AQ9Y3A4 280 aaKnown RBP19.46■□□□□ 0.71
VAT1-201ENST00000355653 ERCC6L2Q5T890 1561 aa19.46■□□□□ 0.71
VAT1-201ENST00000355653 TNNQ9UQP3 1299 aa19.46■□□□□ 0.71
VAT1-201ENST00000355653 GOLGA6L3A6NEY3 463 aa19.45■□□□□ 0.7
VAT1-201ENST00000355653 WWC1Q8IX03 1113 aa19.45■□□□□ 0.7
VAT1-201ENST00000355653 TBC1D32Q96NH3 1257 aa19.45■□□□□ 0.7
VAT1-201ENST00000355653 MAST1Q9Y2H9 1570 aa19.45■□□□□ 0.7
VAT1-201ENST00000355653 IQGAP3Q86VI3 1631 aa19.45■□□□□ 0.7
VAT1-201ENST00000355653 PCDHB15Q9Y5E8 787 aa19.45■□□□□ 0.7
VAT1-201ENST00000355653 XRCC6P12956 609 aaKnown RBP eCLIP19.45■□□□□ 0.7
VAT1-201ENST00000355653 PDZRN3Q9UPQ7 1066 aa19.44■□□□□ 0.7
VAT1-201ENST00000355653 PMFBP1Q8TBY8 1022 aa19.44■□□□□ 0.7
VAT1-201ENST00000355653 PANK2Q9BZ23 570 aa19.44■□□□□ 0.7
VAT1-201ENST00000355653 NAP1L5Q96NT1 182 aaPredicted RBP19.43■□□□□ 0.7
VAT1-201ENST00000355653 SCAF11Q99590 1463 aaKnown RBP19.43■□□□□ 0.7
VAT1-201ENST00000355653 RLBP1P12271 317 aa19.43■□□□□ 0.7
VAT1-201ENST00000355653 TNNT2P45379 298 aaPredicted RBP19.43■□□□□ 0.7
VAT1-201ENST00000355653 EFCAB2Q5VUJ9 269 aa19.43■□□□□ 0.7
VAT1-201ENST00000355653 DUOX2Q9NRD8 1548 aa19.42■□□□□ 0.7
VAT1-201ENST00000355653 NINLQ9Y2I6 1382 aa19.42■□□□□ 0.7
VAT1-201ENST00000355653 IQGAP1P46940 1657 aa19.41■□□□□ 0.7
VAT1-201ENST00000355653 AFAP1Q8N556 730 aa19.41■□□□□ 0.7
VAT1-201ENST00000355653 MADDQ8WXG6 1647 aa19.41■□□□□ 0.7
VAT1-201ENST00000355653 TRAPPC8Q9Y2L5 1435 aa19.41■□□□□ 0.7
VAT1-201ENST00000355653 RARSP54136 660 aaKnown RBP19.4■□□□□ 0.7
VAT1-201ENST00000355653 MCM4P33991 863 aa19.39■□□□□ 0.7
VAT1-201ENST00000355653 NPC1L1Q9UHC9 1359 aa19.39■□□□□ 0.7
VAT1-201ENST00000355653 ATP10AO60312 1499 aa19.39■□□□□ 0.7
VAT1-201ENST00000355653 PLXNC1O60486 1568 aa19.39■□□□□ 0.7
VAT1-201ENST00000355653 MYOM1P52179 1685 aa19.39■□□□□ 0.69
VAT1-201ENST00000355653 CHD1O14646 1710 aa19.39■□□□□ 0.69
VAT1-201ENST00000355653 CARD14Q9BXL6 1004 aa19.39■□□□□ 0.69
VAT1-201ENST00000355653 PLCH2O75038 1416 aa19.39■□□□□ 0.69
VAT1-201ENST00000355653 PNNQ9H307 717 aaKnown RBP19.38■□□□□ 0.69
VAT1-201ENST00000355653 MFAP1P55081 439 aaKnown RBP19.38■□□□□ 0.69
VAT1-201ENST00000355653 RWDD1Q9H446 243 aaPredicted RBP19.36■□□□□ 0.69
VAT1-201ENST00000355653 SPAG9O60271 1321 aaKnown RBP19.36■□□□□ 0.69
VAT1-201ENST00000355653 NGEFQ8N5V2 710 aa19.36■□□□□ 0.69
VAT1-201ENST00000355653 FSD2A1L4K1 749 aa19.35■□□□□ 0.69
VAT1-201ENST00000355653 TRAK2O60296 914 aa19.34■□□□□ 0.69
VAT1-201ENST00000355653 KDM5AP29375 1690 aaKnown RBP19.34■□□□□ 0.69
VAT1-201ENST00000355653 TCP11L2Q8N4U5 519 aa19.33■□□□□ 0.69
VAT1-201ENST00000355653 C22orf23Q9BZE7 217 aa19.33■□□□□ 0.69
VAT1-201ENST00000355653 CFAP70Q5T0N1 1121 aa19.32■□□□□ 0.68
VAT1-201ENST00000355653 CHMP5Q9NZZ3 219 aa19.32■□□□□ 0.68
VAT1-201ENST00000355653 SHROOM2Q13796 1616 aa19.31■□□□□ 0.68
VAT1-201ENST00000355653 MORC1Q86VD1 984 aa19.31■□□□□ 0.68
VAT1-201ENST00000355653 RUNDC1Q96C34 613 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms