RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 CPS1P31327 1500 aa28■■■□□ 2.07
VPS72-201ENST00000354473 FOXD1Q16676 465 aa27.99■■■□□ 2.07
VPS72-201ENST00000354473 MPHOSPH9Q99550 1183 aa27.99■■■□□ 2.07
VPS72-201ENST00000354473 IQSEC2Q5JU85 1478 aa27.99■■■□□ 2.07
VPS72-201ENST00000354473 KIF1BO60333 1816 aa27.99■■■□□ 2.07
VPS72-201ENST00000354473 PPP1R15AO75807 674 aaPredicted RBP27.98■■■□□ 2.07
VPS72-201ENST00000354473 STRCP1A6NGW2 1772 aa27.97■■■□□ 2.07
VPS72-201ENST00000354473 HDGFP51858 240 aaKnown RBP27.97■■■□□ 2.07
VPS72-201ENST00000354473 PLEKHG1Q9ULL1 1385 aa27.96■■■□□ 2.07
VPS72-201ENST00000354473 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.95■■■□□ 2.07
VPS72-201ENST00000354473 BCANQ96GW7 911 aa27.94■■■□□ 2.06
VPS72-201ENST00000354473 SENP3Q9H4L4 574 aaPredicted RBP27.94■■■□□ 2.06
VPS72-201ENST00000354473 NUTM2DQ5VT03 806 aaPredicted RBP27.93■■■□□ 2.06
VPS72-201ENST00000354473 SLC26A8Q96RN1 970 aa27.92■■■□□ 2.06
VPS72-201ENST00000354473 ZNF326Q5BKZ1 582 aaKnown RBP27.92■■■□□ 2.06
VPS72-201ENST00000354473 CCDC144AA2RUR9 1427 aa27.87■■■□□ 2.05
VPS72-201ENST00000354473 NEXMIFQ5QGS0 1516 aa27.87■■■□□ 2.05
VPS72-201ENST00000354473 LRRC7Q96NW7 1537 aa27.85■■■□□ 2.05
VPS72-201ENST00000354473 HRCP23327 699 aa27.84■■■□□ 2.05
VPS72-201ENST00000354473 DIP2AQ14689 1571 aa27.83■■■□□ 2.05
VPS72-201ENST00000354473 ADAMTS13Q76LX8 1427 aa27.82■■■□□ 2.04
VPS72-201ENST00000354473 NWD1Q149M9 1564 aa27.81■■■□□ 2.04
VPS72-201ENST00000354473 NRXN3Q9Y4C0 1643 aa27.79■■■□□ 2.04
VPS72-201ENST00000354473 KCNA6P17658 529 aa27.79■■■□□ 2.04
VPS72-201ENST00000354473 SETBP1Q9Y6X0 1596 aa27.79■■■□□ 2.04
VPS72-201ENST00000354473 CHD2O14647 1828 aaKnown RBP27.78■■■□□ 2.04
VPS72-201ENST00000354473 UBAP1LF5GYI3 381 aa27.78■■■□□ 2.04
VPS72-201ENST00000354473 TBX22Q9Y458 520 aa27.78■■■□□ 2.04
VPS72-201ENST00000354473 PPLO60437 1756 aa27.77■■■□□ 2.04
VPS72-201ENST00000354473 XIRP1Q702N8 1843 aaKnown RBP27.76■■■□□ 2.04
VPS72-201ENST00000354473 NKTRP30414 1462 aaKnown RBP27.76■■■□□ 2.03
VPS72-201ENST00000354473 SPATA31E1Q6ZUB1 1445 aa27.75■■■□□ 2.03
VPS72-201ENST00000354473 RPGRIP1LQ68CZ1 1315 aa27.74■■■□□ 2.03
VPS72-201ENST00000354473 PIK3R4Q99570 1358 aa27.71■■■□□ 2.03
VPS72-201ENST00000354473 VGFO15240 615 aaPredicted RBP27.7■■■□□ 2.03
VPS72-201ENST00000354473 TMEM94Q12767 1356 aa27.7■■■□□ 2.02
VPS72-201ENST00000354473 RGL3Q3MIN7 710 aa27.69■■■□□ 2.02
VPS72-201ENST00000354473 PROSER2Q86WR7 435 aaPredicted RBP27.69■■■□□ 2.02
VPS72-201ENST00000354473 IFT172Q9UG01 1749 aa27.69■■■□□ 2.02
VPS72-201ENST00000354473 ANKRD30BQ9BXX2 1392 aa27.69■■■□□ 2.02
VPS72-201ENST00000354473 TOM1O60784 492 aa27.67■■■□□ 2.02
VPS72-201ENST00000354473 ALKQ9UM73 1620 aa27.66■■■□□ 2.02
VPS72-201ENST00000354473 PTPRUQ92729 1446 aa27.65■■■□□ 2.02
VPS72-201ENST00000354473 RBM33Q96EV2 1170 aaKnown RBP27.65■■■□□ 2.02
VPS72-201ENST00000354473 METP08581 1390 aa27.64■■■□□ 2.02
VPS72-201ENST00000354473 SETD1AO15047 1707 aaKnown RBP27.63■■■□□ 2.01
VPS72-201ENST00000354473 XRN1Q8IZH2 1706 aaKnown RBP27.63■■■□□ 2.01
VPS72-201ENST00000354473 SCAF1Q9H7N4 1312 aaKnown RBP27.63■■■□□ 2.01
VPS72-201ENST00000354473 PIP4K2BP78356 416 aa27.63■■■□□ 2.01
VPS72-201ENST00000354473 AMOTL2Q9Y2J4 779 aa27.61■■■□□ 2.01
VPS72-201ENST00000354473 ADGRF5Q8IZF2 1346 aa27.59■■■□□ 2.01
VPS72-201ENST00000354473 TRIM26Q12899 539 aaPredicted RBP27.58■■■□□ 2.01
VPS72-201ENST00000354473 MSH6P52701 1360 aa27.55■■■□□ 2
VPS72-201ENST00000354473 PIK3C2GO75747 1445 aa27.53■■■□□ 2
VPS72-201ENST00000354473 NCOA3Q9Y6Q9 1424 aa27.53■■■□□ 2
VPS72-201ENST00000354473 MYOM2P54296 1465 aa27.52■■■□□ 2
VPS72-201ENST00000354473 C14orf37Q86TY3 774 aa27.52■■■□□ 2
VPS72-201ENST00000354473 NRXN1Q9ULB1 1477 aa27.49■■□□□ 1.99
VPS72-201ENST00000354473 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.48■■□□□ 1.99
VPS72-201ENST00000354473 PTCH1Q13635 1447 aa27.46■■□□□ 1.99
VPS72-201ENST00000354473 LAMC1P11047 1609 aa27.44■■□□□ 1.98
VPS72-201ENST00000354473 HSPA1LP34931 641 aa27.44■■□□□ 1.98
VPS72-201ENST00000354473 ASXL1Q8IXJ9 1541 aa27.44■■□□□ 1.98
VPS72-201ENST00000354473 PRAG1Q86YV5 1406 aa27.44■■□□□ 1.98
VPS72-201ENST00000354473 C19orf44Q9H6X5 657 aa27.43■■□□□ 1.98
VPS72-201ENST00000354473 ROBO2Q9HCK4 1378 aa27.43■■□□□ 1.98
VPS72-201ENST00000354473 DCAF11Q8TEB1 546 aa27.41■■□□□ 1.98
VPS72-201ENST00000354473 NALCNQ8IZF0 1738 aa27.41■■□□□ 1.98
VPS72-201ENST00000354473 ROBO1Q9Y6N7 1651 aa27.41■■□□□ 1.98
VPS72-201ENST00000354473 FAM135BQ49AJ0 1406 aa27.4■■□□□ 1.98
VPS72-201ENST00000354473 ADGRL3Q9HAR2 1447 aa27.4■■□□□ 1.98
VPS72-201ENST00000354473 KDM2AQ9Y2K7 1162 aa27.4■■□□□ 1.98
VPS72-201ENST00000354473 DHX57Q6P158 1386 aaKnown RBP27.39■■□□□ 1.98
VPS72-201ENST00000354473 DCCP43146 1447 aa27.39■■□□□ 1.97
VPS72-201ENST00000354473 ATF3P18847 181 aa27.39■■□□□ 1.97
VPS72-201ENST00000354473 SLAIN2Q9P270 581 aa27.39■■□□□ 1.97
VPS72-201ENST00000354473 TMEM132EQ6IEE7 984 aa27.38■■□□□ 1.97
VPS72-201ENST00000354473 CADPS2Q86UW7 1296 aa27.38■■□□□ 1.97
VPS72-201ENST00000354473 C14orf93Q9H972 538 aaKnown RBP27.38■■□□□ 1.97
VPS72-201ENST00000354473 KNDC1Q76NI1 1749 aa27.38■■□□□ 1.97
VPS72-201ENST00000354473 LRPPRCP42704 1394 aaKnown RBP27.38■■□□□ 1.97
VPS72-201ENST00000354473 CFAP70Q5T0N1 1121 aa27.37■■□□□ 1.97
VPS72-201ENST00000354473 STK26Q9P289 416 aa27.37■■□□□ 1.97
VPS72-201ENST00000354473 TECPR2O15040 1411 aa27.35■■□□□ 1.97
VPS72-201ENST00000354473 YTHDC2Q9H6S0 1430 aaKnown RBP27.34■■□□□ 1.97
VPS72-201ENST00000354473 STAC3Q96MF2 364 aa27.34■■□□□ 1.97
VPS72-201ENST00000354473 ABCC11Q96J66 1382 aa27.32■■□□□ 1.96
VPS72-201ENST00000354473 SIN3AQ96ST3 1273 aa27.28■■□□□ 1.96
VPS72-201ENST00000354473 ADGRB1O14514 1584 aa27.28■■□□□ 1.96
VPS72-201ENST00000354473 MST1RQ04912 1400 aa27.28■■□□□ 1.96
VPS72-201ENST00000354473 WAPLQ7Z5K2 1190 aa27.25■■□□□ 1.95
VPS72-201ENST00000354473 PHLPP1O60346 1717 aa27.25■■□□□ 1.95
VPS72-201ENST00000354473 PLEKHH1Q9ULM0 1364 aa27.24■■□□□ 1.95
VPS72-201ENST00000354473 CDC42BPGQ6DT37 1551 aa27.23■■□□□ 1.95
VPS72-201ENST00000354473 NEUROD1Q13562 356 aa27.23■■□□□ 1.95
VPS72-201ENST00000354473 DLC1Q96QB1 1528 aa27.21■■□□□ 1.95
VPS72-201ENST00000354473 BRINP3Q76B58 766 aa27.2■■□□□ 1.95
VPS72-201ENST00000354473 KIAA1210Q9ULL0 1709 aa27.2■■□□□ 1.94
VPS72-201ENST00000354473 SIRT1Q96EB6 747 aa27.19■■□□□ 1.94
VPS72-201ENST00000354473 L3MBTL2Q969R5 705 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms