RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 LRRC7Q96NW7 1537 aa24.2■■□□□ 1.46
RAB5C-201ENST00000346213 TRIM52Q96A61 297 aa24.2■■□□□ 1.46
RAB5C-201ENST00000346213 SLC26A8Q96RN1 970 aa24.19■■□□□ 1.46
RAB5C-201ENST00000346213 EID1Q9Y6B2 187 aa24.19■■□□□ 1.46
RAB5C-201ENST00000346213 CHGAP10645 457 aaKnown RBP24.18■■□□□ 1.46
RAB5C-201ENST00000346213 PLEKHG1Q9ULL1 1385 aa24.15■■□□□ 1.46
RAB5C-201ENST00000346213 ADAMTS13Q76LX8 1427 aa24.14■■□□□ 1.46
RAB5C-201ENST00000346213 SLC4A1APQ9BWU0 796 aaKnown RBP24.14■■□□□ 1.45
RAB5C-201ENST00000346213 XIRP1Q702N8 1843 aaKnown RBP24.13■■□□□ 1.45
RAB5C-201ENST00000346213 SETD5Q9C0A6 1442 aa24.12■■□□□ 1.45
RAB5C-201ENST00000346213 NRXN3Q9Y4C0 1643 aa24.12■■□□□ 1.45
RAB5C-201ENST00000346213 RAB3GAP2Q9H2M9 1393 aa24.11■■□□□ 1.45
RAB5C-201ENST00000346213 NEXMIFQ5QGS0 1516 aa24.11■■□□□ 1.45
RAB5C-201ENST00000346213 NWD1Q149M9 1564 aa24.11■■□□□ 1.45
RAB5C-201ENST00000346213 UBAP1LF5GYI3 381 aa24.09■■□□□ 1.45
RAB5C-201ENST00000346213 RBM33Q96EV2 1170 aaKnown RBP24.08■■□□□ 1.45
RAB5C-201ENST00000346213 MPHOSPH9Q99550 1183 aa24.06■■□□□ 1.44
RAB5C-201ENST00000346213 PPP1R15AO75807 674 aaPredicted RBP24.05■■□□□ 1.44
RAB5C-201ENST00000346213 PTPRUQ92729 1446 aa24.04■■□□□ 1.44
RAB5C-201ENST00000346213 KCNA6P17658 529 aa24.02■■□□□ 1.44
RAB5C-201ENST00000346213 SETBP1Q9Y6X0 1596 aa24.01■■□□□ 1.43
RAB5C-201ENST00000346213 TMEM94Q12767 1356 aa24.01■■□□□ 1.43
RAB5C-201ENST00000346213 TRIM26Q12899 539 aaPredicted RBP24.01■■□□□ 1.43
RAB5C-201ENST00000346213 ABCF1Q8NE71 845 aaKnown RBP eCLIP24■■□□□ 1.43
RAB5C-201ENST00000346213 BCANQ96GW7 911 aa24■■□□□ 1.43
RAB5C-201ENST00000346213 PCGF6Q9BYE7 350 aa24■■□□□ 1.43
RAB5C-201ENST00000346213 CHD2O14647 1828 aaKnown RBP24■■□□□ 1.43
RAB5C-201ENST00000346213 KIF1BO60333 1816 aa23.99■■□□□ 1.43
RAB5C-201ENST00000346213 ZNF326Q5BKZ1 582 aaKnown RBP23.99■■□□□ 1.43
RAB5C-201ENST00000346213 TBX22Q9Y458 520 aa23.99■■□□□ 1.43
RAB5C-201ENST00000346213 NKTRP30414 1462 aaKnown RBP23.98■■□□□ 1.43
RAB5C-201ENST00000346213 DIP2AQ14689 1571 aa23.98■■□□□ 1.43
RAB5C-201ENST00000346213 SPATA31E1Q6ZUB1 1445 aa23.97■■□□□ 1.43
RAB5C-201ENST00000346213 PIP4K2BP78356 416 aa23.97■■□□□ 1.43
RAB5C-201ENST00000346213 METP08581 1390 aa23.96■■□□□ 1.43
RAB5C-201ENST00000346213 SETD1AO15047 1707 aaKnown RBP23.94■■□□□ 1.42
RAB5C-201ENST00000346213 XRN1Q8IZH2 1706 aaKnown RBP23.93■■□□□ 1.42
RAB5C-201ENST00000346213 PPLO60437 1756 aa23.93■■□□□ 1.42
RAB5C-201ENST00000346213 CCDC144AA2RUR9 1427 aa23.92■■□□□ 1.42
RAB5C-201ENST00000346213 HDGFP51858 240 aaKnown RBP23.92■■□□□ 1.42
RAB5C-201ENST00000346213 PROSER2Q86WR7 435 aaPredicted RBP23.91■■□□□ 1.42
RAB5C-201ENST00000346213 HSPA1LP34931 641 aa23.9■■□□□ 1.42
RAB5C-201ENST00000346213 SCAF1Q9H7N4 1312 aaKnown RBP23.9■■□□□ 1.42
RAB5C-201ENST00000346213 TOM1O60784 492 aa23.89■■□□□ 1.42
RAB5C-201ENST00000346213 IFT172Q9UG01 1749 aa23.88■■□□□ 1.41
RAB5C-201ENST00000346213 PIK3R4Q99570 1358 aa23.87■■□□□ 1.41
RAB5C-201ENST00000346213 ADGRF5Q8IZF2 1346 aa23.86■■□□□ 1.41
RAB5C-201ENST00000346213 AMOTL2Q9Y2J4 779 aa23.86■■□□□ 1.41
RAB5C-201ENST00000346213 ANKRD30BQ9BXX2 1392 aa23.85■■□□□ 1.41
RAB5C-201ENST00000346213 RGL3Q3MIN7 710 aa23.85■■□□□ 1.41
RAB5C-201ENST00000346213 ASXL1Q8IXJ9 1541 aa23.83■■□□□ 1.41
RAB5C-201ENST00000346213 RPGRIP1LQ68CZ1 1315 aa23.81■■□□□ 1.4
RAB5C-201ENST00000346213 HRCP23327 699 aa23.79■■□□□ 1.4
RAB5C-201ENST00000346213 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.78■■□□□ 1.4
RAB5C-201ENST00000346213 ROBO1Q9Y6N7 1651 aa23.77■■□□□ 1.4
RAB5C-201ENST00000346213 VGFO15240 615 aaPredicted RBP23.77■■□□□ 1.4
RAB5C-201ENST00000346213 ROBO2Q9HCK4 1378 aa23.77■■□□□ 1.39
RAB5C-201ENST00000346213 PIK3C2GO75747 1445 aa23.76■■□□□ 1.39
RAB5C-201ENST00000346213 MSH6P52701 1360 aa23.76■■□□□ 1.39
RAB5C-201ENST00000346213 FAM135BQ49AJ0 1406 aa23.75■■□□□ 1.39
RAB5C-201ENST00000346213 NRXN1Q9ULB1 1477 aa23.75■■□□□ 1.39
RAB5C-201ENST00000346213 NALCNQ8IZF0 1738 aa23.74■■□□□ 1.39
RAB5C-201ENST00000346213 NCOA3Q9Y6Q9 1424 aa23.74■■□□□ 1.39
RAB5C-201ENST00000346213 PRAG1Q86YV5 1406 aa23.73■■□□□ 1.39
RAB5C-201ENST00000346213 ACIN1Q9UKV3 1341 aaKnown RBP23.72■■□□□ 1.39
RAB5C-201ENST00000346213 PTCH1Q13635 1447 aa23.71■■□□□ 1.39
RAB5C-201ENST00000346213 MYOM2P54296 1465 aa23.7■■□□□ 1.38
RAB5C-201ENST00000346213 SLAIN2Q9P270 581 aa23.69■■□□□ 1.38
RAB5C-201ENST00000346213 DHX57Q6P158 1386 aaKnown RBP23.69■■□□□ 1.38
RAB5C-201ENST00000346213 ADGRL3Q9HAR2 1447 aa23.68■■□□□ 1.38
RAB5C-201ENST00000346213 TMEM132EQ6IEE7 984 aa23.67■■□□□ 1.38
RAB5C-201ENST00000346213 MED1Q15648 1581 aaPredicted RBP23.67■■□□□ 1.38
RAB5C-201ENST00000346213 C19orf44Q9H6X5 657 aa23.67■■□□□ 1.38
RAB5C-201ENST00000346213 MST1RQ04912 1400 aa23.66■■□□□ 1.38
RAB5C-201ENST00000346213 C14orf37Q86TY3 774 aa23.66■■□□□ 1.38
RAB5C-201ENST00000346213 PLEKHH1Q9ULM0 1364 aa23.65■■□□□ 1.38
RAB5C-201ENST00000346213 DISP3Q9P2K9 1392 aa23.64■■□□□ 1.37
RAB5C-201ENST00000346213 DCCP43146 1447 aa23.63■■□□□ 1.37
RAB5C-201ENST00000346213 CFAP70Q5T0N1 1121 aa23.63■■□□□ 1.37
RAB5C-201ENST00000346213 TECPR2O15040 1411 aa23.63■■□□□ 1.37
RAB5C-201ENST00000346213 COL16A1Q07092 1604 aaPredicted RBP23.62■■□□□ 1.37
RAB5C-201ENST00000346213 ILDR2Q71H61 639 aa23.61■■□□□ 1.37
RAB5C-201ENST00000346213 LRPPRCP42704 1394 aaKnown RBP23.61■■□□□ 1.37
RAB5C-201ENST00000346213 STK26Q9P289 416 aa23.6■■□□□ 1.37
RAB5C-201ENST00000346213 ADGRB1O14514 1584 aa23.6■■□□□ 1.37
RAB5C-201ENST00000346213 BRINP3Q76B58 766 aa23.6■■□□□ 1.37
RAB5C-201ENST00000346213 C14orf93Q9H972 538 aaKnown RBP23.6■■□□□ 1.37
RAB5C-201ENST00000346213 KNDC1Q76NI1 1749 aa23.59■■□□□ 1.37
RAB5C-201ENST00000346213 WAPLQ7Z5K2 1190 aa23.59■■□□□ 1.37
RAB5C-201ENST00000346213 CADPS2Q86UW7 1296 aa23.59■■□□□ 1.37
RAB5C-201ENST00000346213 YTHDC2Q9H6S0 1430 aaKnown RBP23.59■■□□□ 1.37
RAB5C-201ENST00000346213 ATF3P18847 181 aa23.57■■□□□ 1.36
RAB5C-201ENST00000346213 PHLPP1O60346 1717 aa23.57■■□□□ 1.36
RAB5C-201ENST00000346213 AHDC1Q5TGY3 1603 aaPredicted RBP23.57■■□□□ 1.36
RAB5C-201ENST00000346213 ABCC11Q96J66 1382 aa23.56■■□□□ 1.36
RAB5C-201ENST00000346213 DCAF11Q8TEB1 546 aa23.55■■□□□ 1.36
RAB5C-201ENST00000346213 DDX17Q92841 729 aaKnown RBP23.55■■□□□ 1.36
RAB5C-201ENST00000346213 KDM2AQ9Y2K7 1162 aa23.55■■□□□ 1.36
RAB5C-201ENST00000346213 C1orf167Q5SNV9 1468 aa23.54■■□□□ 1.36
RAB5C-201ENST00000346213 LAMC1P11047 1609 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms