RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 ANKRD30BQ9BXX2 1392 aa19.34■□□□□ 0.69
TUBD1-202ENST00000340993 SCAF11Q99590 1463 aaKnown RBP19.34■□□□□ 0.69
TUBD1-202ENST00000340993 DHX57Q6P158 1386 aaKnown RBP19.34■□□□□ 0.69
TUBD1-202ENST00000340993 SLIT1O75093 1534 aa19.33■□□□□ 0.69
TUBD1-202ENST00000340993 IQGAP1P46940 1657 aa19.33■□□□□ 0.68
TUBD1-202ENST00000340993 ARHGAP23Q9P227 1491 aa19.32■□□□□ 0.68
TUBD1-202ENST00000340993 NPHP4O75161 1426 aaPredicted RBP19.31■□□□□ 0.68
TUBD1-202ENST00000340993 NEUROD1Q13562 356 aa19.3■□□□□ 0.68
TUBD1-202ENST00000340993 SIN3AQ96ST3 1273 aa19.3■□□□□ 0.68
TUBD1-202ENST00000340993 ZFYVE9O95405 1425 aa19.3■□□□□ 0.68
TUBD1-202ENST00000340993 SLC26A8Q96RN1 970 aa19.29■□□□□ 0.68
TUBD1-202ENST00000340993 NEXMIFQ5QGS0 1516 aa19.28■□□□□ 0.68
TUBD1-202ENST00000340993 DMRT2Q9Y5R5 561 aa19.27■□□□□ 0.67
TUBD1-202ENST00000340993 PPLO60437 1756 aa19.26■□□□□ 0.67
TUBD1-202ENST00000340993 ZNF335Q9H4Z2 1342 aaPredicted RBP19.26■□□□□ 0.67
TUBD1-202ENST00000340993 SPATA31E1Q6ZUB1 1445 aa19.25■□□□□ 0.67
TUBD1-202ENST00000340993 KDM2AQ9Y2K7 1162 aa19.24■□□□□ 0.67
TUBD1-202ENST00000340993 MED14O60244 1454 aa19.23■□□□□ 0.67
TUBD1-202ENST00000340993 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.23■□□□□ 0.67
TUBD1-202ENST00000340993 HDGFP51858 240 aaKnown RBP19.22■□□□□ 0.67
TUBD1-202ENST00000340993 IFT172Q9UG01 1749 aa19.21■□□□□ 0.67
TUBD1-202ENST00000340993 ADGRF5Q8IZF2 1346 aa19.2■□□□□ 0.66
TUBD1-202ENST00000340993 PLEKHG1Q9ULL1 1385 aa19.2■□□□□ 0.66
TUBD1-202ENST00000340993 DCAF11Q8TEB1 546 aa19.19■□□□□ 0.66
TUBD1-202ENST00000340993 STRCP1A6NGW2 1772 aa19.18■□□□□ 0.66
TUBD1-202ENST00000340993 NRXN3Q9Y4C0 1643 aa19.18■□□□□ 0.66
TUBD1-202ENST00000340993 CCER1Q8TC90 406 aaPredicted RBP19.18■□□□□ 0.66
TUBD1-202ENST00000340993 RBM33Q96EV2 1170 aaKnown RBP19.16■□□□□ 0.66
TUBD1-202ENST00000340993 VGFO15240 615 aaPredicted RBP19.16■□□□□ 0.66
TUBD1-202ENST00000340993 ADAMTS13Q76LX8 1427 aa19.15■□□□□ 0.66
TUBD1-202ENST00000340993 RPGRIP1LQ68CZ1 1315 aa19.15■□□□□ 0.66
TUBD1-202ENST00000340993 SETBP1Q9Y6X0 1596 aa19.11■□□□□ 0.65
TUBD1-202ENST00000340993 METP08581 1390 aa19.1■□□□□ 0.65
TUBD1-202ENST00000340993 LTBP4Q8N2S1 1624 aa19.1■□□□□ 0.65
TUBD1-202ENST00000340993 ALKQ9UM73 1620 aa19.1■□□□□ 0.65
TUBD1-202ENST00000340993 L3MBTL2Q969R5 705 aa19.1■□□□□ 0.65
TUBD1-202ENST00000340993 SETD1AO15047 1707 aaKnown RBP19.09■□□□□ 0.65
TUBD1-202ENST00000340993 TMEM132EQ6IEE7 984 aa19.09■□□□□ 0.65
TUBD1-202ENST00000340993 CHD2O14647 1828 aaKnown RBP19.08■□□□□ 0.65
TUBD1-202ENST00000340993 CFAP70Q5T0N1 1121 aa19.08■□□□□ 0.64
TUBD1-202ENST00000340993 STK26Q9P289 416 aa19.07■□□□□ 0.64
TUBD1-202ENST00000340993 TBX22Q9Y458 520 aa19.07■□□□□ 0.64
TUBD1-202ENST00000340993 PIK3C2GO75747 1445 aa19.07■□□□□ 0.64
TUBD1-202ENST00000340993 PTPRUQ92729 1446 aa19.07■□□□□ 0.64
TUBD1-202ENST00000340993 DIP2AQ14689 1571 aa19.07■□□□□ 0.64
TUBD1-202ENST00000340993 KCNA6P17658 529 aa19.06■□□□□ 0.64
TUBD1-202ENST00000340993 TONSLQ96HA7 1378 aa19.06■□□□□ 0.64
TUBD1-202ENST00000340993 MYOM2P54296 1465 aa19.06■□□□□ 0.64
TUBD1-202ENST00000340993 CERKQ8TCT0 537 aa19.05■□□□□ 0.64
TUBD1-202ENST00000340993 AMOTL2Q9Y2J4 779 aa19.05■□□□□ 0.64
TUBD1-202ENST00000340993 PROSER2Q86WR7 435 aaPredicted RBP19.04■□□□□ 0.64
TUBD1-202ENST00000340993 ASXL1Q8IXJ9 1541 aa19.02■□□□□ 0.64
TUBD1-202ENST00000340993 XIRP1Q702N8 1843 aaKnown RBP19.02■□□□□ 0.64
TUBD1-202ENST00000340993 NRXN1Q9ULB1 1477 aa19.02■□□□□ 0.64
TUBD1-202ENST00000340993 NWD1Q149M9 1564 aa19.01■□□□□ 0.63
TUBD1-202ENST00000340993 LRRC7Q96NW7 1537 aa19.01■□□□□ 0.63
TUBD1-202ENST00000340993 CPS1P31327 1500 aa19.01■□□□□ 0.63
TUBD1-202ENST00000340993 C14orf37Q86TY3 774 aa19.01■□□□□ 0.63
TUBD1-202ENST00000340993 TMEM94Q12767 1356 aa18.99■□□□□ 0.63
TUBD1-202ENST00000340993 XRN1Q8IZH2 1706 aaKnown RBP18.99■□□□□ 0.63
TUBD1-202ENST00000340993 C14orf93Q9H972 538 aaKnown RBP18.98■□□□□ 0.63
TUBD1-202ENST00000340993 PRAG1Q86YV5 1406 aa18.98■□□□□ 0.63
TUBD1-202ENST00000340993 SAFB2Q14151 953 aaKnown RBP eCLIP18.97■□□□□ 0.63
TUBD1-202ENST00000340993 LAMC1P11047 1609 aa18.97■□□□□ 0.63
TUBD1-202ENST00000340993 NBPF1Q3BBV0 1214 aa18.96■□□□□ 0.63
TUBD1-202ENST00000340993 SCAF1Q9H7N4 1312 aaKnown RBP18.96■□□□□ 0.63
TUBD1-202ENST00000340993 NKTRP30414 1462 aaKnown RBP18.96■□□□□ 0.63
TUBD1-202ENST00000340993 PIK3R4Q99570 1358 aa18.95■□□□□ 0.62
TUBD1-202ENST00000340993 ROBO2Q9HCK4 1378 aa18.95■□□□□ 0.62
TUBD1-202ENST00000340993 NBPF8Q3BBV2 869 aa18.95■□□□□ 0.62
TUBD1-202ENST00000340993 TRAK1Q9UPV9 953 aa18.95■□□□□ 0.62
TUBD1-202ENST00000340993 WAPLQ7Z5K2 1190 aa18.94■□□□□ 0.62
TUBD1-202ENST00000340993 YTHDC2Q9H6S0 1430 aaKnown RBP18.94■□□□□ 0.62
TUBD1-202ENST00000340993 UBAP1LF5GYI3 381 aa18.93■□□□□ 0.62
TUBD1-202ENST00000340993 PIP4K2BP78356 416 aa18.92■□□□□ 0.62
TUBD1-202ENST00000340993 PLEKHH1Q9ULM0 1364 aa18.92■□□□□ 0.62
TUBD1-202ENST00000340993 ADGRB1O14514 1584 aa18.92■□□□□ 0.62
TUBD1-202ENST00000340993 TRPM1Q7Z4N2 1603 aa18.91■□□□□ 0.62
TUBD1-202ENST00000340993 LRPPRCP42704 1394 aaKnown RBP18.9■□□□□ 0.62
TUBD1-202ENST00000340993 CLSPNQ9HAW4 1339 aa18.9■□□□□ 0.62
TUBD1-202ENST00000340993 NALCNQ8IZF0 1738 aa18.9■□□□□ 0.62
TUBD1-202ENST00000340993 KNDC1Q76NI1 1749 aa18.89■□□□□ 0.61
TUBD1-202ENST00000340993 STAC3Q96MF2 364 aa18.88■□□□□ 0.61
TUBD1-202ENST00000340993 ROCK2O75116 1388 aaKnown RBP18.88■□□□□ 0.61
TUBD1-202ENST00000340993 PRAM1Q96QH2 718 aa18.88■□□□□ 0.61
TUBD1-202ENST00000340993 MSH6P52701 1360 aa18.88■□□□□ 0.61
TUBD1-202ENST00000340993 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.87■□□□□ 0.61
TUBD1-202ENST00000340993 KIAA1210Q9ULL0 1709 aa18.87■□□□□ 0.61
TUBD1-202ENST00000340993 POGKQ9P215 609 aa18.87■□□□□ 0.61
TUBD1-202ENST00000340993 PTCH1Q13635 1447 aa18.87■□□□□ 0.61
TUBD1-202ENST00000340993 NUTM2FA1L443 756 aa18.86■□□□□ 0.61
TUBD1-202ENST00000340993 HIRIP3Q9BW71 556 aaPredicted RBP18.86■□□□□ 0.61
TUBD1-202ENST00000340993 ARHGEF28Q8N1W1 1705 aaKnown RBP18.85■□□□□ 0.61
TUBD1-202ENST00000340993 ABCC11Q96J66 1382 aa18.84■□□□□ 0.61
TUBD1-202ENST00000340993 MINK1Q8N4C8 1332 aaPredicted RBP18.84■□□□□ 0.61
TUBD1-202ENST00000340993 IQSEC2Q5JU85 1478 aa18.82■□□□□ 0.6
TUBD1-202ENST00000340993 TOM1O60784 492 aa18.82■□□□□ 0.6
TUBD1-202ENST00000340993 ATF3P18847 181 aa18.82■□□□□ 0.6
TUBD1-202ENST00000340993 TECPR2O15040 1411 aa18.82■□□□□ 0.6
TUBD1-202ENST00000340993 CARD11Q9BXL7 1154 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms