RNA–Protein interactions for RNA: ENST00000338356.7

CPM-201, Transcript of carboxypeptidase M, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPM, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-201ENST00000338356 USP35Q9P2H5 1018 aa10.56□□□□□ -0.72
CPM-201ENST00000338356 ST18O60284 1047 aa10.56□□□□□ -0.72
CPM-201ENST00000338356 TRIM34Q9BYJ4 488 aa10.56□□□□□ -0.72
CPM-201ENST00000338356 RILPL2Q969X0 211 aa10.56□□□□□ -0.72
CPM-201ENST00000338356 BCL2L13Q9BXK5 485 aa10.56□□□□□ -0.72
CPM-201ENST00000338356 PDE3BQ13370 1112 aa10.55□□□□□ -0.72
CPM-201ENST00000338356 CTDP1Q9Y5B0 961 aaPredicted RBP10.55□□□□□ -0.72
CPM-201ENST00000338356 PLEKHH2Q8IVE3 1493 aa10.55□□□□□ -0.72
CPM-201ENST00000338356 RAD54L2Q9Y4B4 1467 aa10.55□□□□□ -0.72
CPM-201ENST00000338356 TTC5Q8N0Z6 440 aa10.55□□□□□ -0.72
CPM-201ENST00000338356 FHOD3Q2V2M9 1422 aa10.55□□□□□ -0.72
CPM-201ENST00000338356 SETQ01105 290 aaPredicted RBP10.55□□□□□ -0.72
CPM-201ENST00000338356 ANKRD45Q5TZF3 282 aa10.55□□□□□ -0.72
CPM-201ENST00000338356 UBAP1LF5GYI3 381 aa10.54□□□□□ -0.72
CPM-201ENST00000338356 KIF16BQ96L93 1317 aa10.54□□□□□ -0.72
CPM-201ENST00000338356 DDX49Q9Y6V7 483 aaKnown RBP10.54□□□□□ -0.72
CPM-201ENST00000338356 L3MBTL2Q969R5 705 aa10.54□□□□□ -0.72
CPM-201ENST00000338356 NUTM2FA1L443 756 aa10.53□□□□□ -0.72
CPM-201ENST00000338356 AKNAQ7Z591 1439 aa10.53□□□□□ -0.72
CPM-201ENST00000338356 FRAT2O75474 233 aaPredicted RBP10.53□□□□□ -0.72
CPM-201ENST00000338356 FAM13BQ9NYF5 915 aa10.53□□□□□ -0.72
CPM-201ENST00000338356 CCAR2Q8N163 923 aaKnown RBP10.53□□□□□ -0.72
CPM-201ENST00000338356 NOL10Q9BSC4 688 aaKnown RBP10.53□□□□□ -0.72
CPM-201ENST00000338356 LTV1Q96GA3 475 aaPredicted RBP10.53□□□□□ -0.72
CPM-201ENST00000338356 NESP48681 1621 aa10.53□□□□□ -0.72
CPM-201ENST00000338356 PATL2C9JE40 543 aaKnown RBP10.53□□□□□ -0.72
CPM-201ENST00000338356 H3BQV1 296 aa10.53□□□□□ -0.72
CPM-201ENST00000338356 IFFO2Q5TF58 517 aa10.53□□□□□ -0.72
CPM-201ENST00000338356 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.52□□□□□ -0.72
CPM-201ENST00000338356 FBXW7Q969H0 707 aa10.52□□□□□ -0.73
CPM-201ENST00000338356 COG3Q96JB2 828 aa10.52□□□□□ -0.73
CPM-201ENST00000338356 ZBED9Q6R2W3 1325 aa10.52□□□□□ -0.73
CPM-201ENST00000338356 MCTP1Q6DN14 999 aa10.52□□□□□ -0.73
CPM-201ENST00000338356 PANK3Q9H999 370 aa10.52□□□□□ -0.73
CPM-201ENST00000338356 SKOR2Q2VWA4 1001 aaPredicted RBP10.52□□□□□ -0.73
CPM-201ENST00000338356 LMOD3Q0VAK6 560 aa10.51□□□□□ -0.73
CPM-201ENST00000338356 PPP6R1Q9UPN7 881 aa10.51□□□□□ -0.73
CPM-201ENST00000338356 PHLDB1Q86UU1 1377 aa10.51□□□□□ -0.73
CPM-201ENST00000338356 GORABQ5T7V8 394 aa10.51□□□□□ -0.73
CPM-201ENST00000338356 WDHD1O75717 1129 aaPredicted RBP10.5□□□□□ -0.73
CPM-201ENST00000338356 RASSF8Q8NHQ8 419 aa10.5□□□□□ -0.73
CPM-201ENST00000338356 RAPGEF4Q8WZA2 1011 aa10.5□□□□□ -0.73
CPM-201ENST00000338356 STK31Q9BXU1 1019 aa10.5□□□□□ -0.73
CPM-201ENST00000338356 PES1O00541 588 aaKnown RBP10.49□□□□□ -0.73
CPM-201ENST00000338356 FOSBP53539 338 aa10.49□□□□□ -0.73
CPM-201ENST00000338356 ESCO1Q5FWF5 840 aa10.49□□□□□ -0.73
CPM-201ENST00000338356 RUSC2Q8N2Y8 1516 aa10.49□□□□□ -0.73
CPM-201ENST00000338356 COG6Q9Y2V7 657 aa10.49□□□□□ -0.73
CPM-201ENST00000338356 EVC2Q86UK5 1308 aa10.49□□□□□ -0.73
CPM-201ENST00000338356 HMMRO75330 724 aa10.49□□□□□ -0.73
CPM-201ENST00000338356 TPD52L1Q16890 204 aaPredicted RBP10.48□□□□□ -0.73
CPM-201ENST00000338356 C16orf71Q8IYS4 520 aaPredicted RBP10.48□□□□□ -0.73
CPM-201ENST00000338356 GOLGA6L19H0YKK7 550 aa10.48□□□□□ -0.73
CPM-201ENST00000338356 AMOTL1Q8IY63 956 aa10.48□□□□□ -0.73
CPM-201ENST00000338356 ANO2Q9NQ90 1003 aa10.48□□□□□ -0.73
CPM-201ENST00000338356 CD109Q6YHK3 1445 aa10.48□□□□□ -0.73
CPM-201ENST00000338356 NLRP13Q86W25 1043 aa10.48□□□□□ -0.73
CPM-201ENST00000338356 RBM33Q96EV2 1170 aaKnown RBP10.48□□□□□ -0.73
CPM-201ENST00000338356 MAGI1Q96QZ7 1491 aaPredicted RBP10.48□□□□□ -0.73
CPM-201ENST00000338356 DNMBPQ6XZF7 1577 aa10.47□□□□□ -0.73
CPM-201ENST00000338356 LRPPRCP42704 1394 aaKnown RBP10.47□□□□□ -0.73
CPM-201ENST00000338356 TPM3P06753 285 aa10.47□□□□□ -0.73
CPM-201ENST00000338356 SF3A1Q15459 793 aaKnown RBP10.47□□□□□ -0.73
CPM-201ENST00000338356 USP47Q96K76 1375 aa10.46□□□□□ -0.73
CPM-201ENST00000338356 NFKBIBQ15653 356 aa10.46□□□□□ -0.73
CPM-201ENST00000338356 IL27Q8NEV9 243 aa10.46□□□□□ -0.73
CPM-201ENST00000338356 CFTRP13569 1480 aa10.46□□□□□ -0.73
CPM-201ENST00000338356 PLB1Q6P1J6 1458 aa10.46□□□□□ -0.73
CPM-201ENST00000338356 R3HCC1Q9Y3T6 440 aaKnown RBP10.46□□□□□ -0.73
CPM-201ENST00000338356 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.46□□□□□ -0.74
CPM-201ENST00000338356 CCDC144AA2RUR9 1427 aa10.46□□□□□ -0.74
CPM-201ENST00000338356 FAM184AQ8NB25 1140 aa10.46□□□□□ -0.74
CPM-201ENST00000338356 BRPF3Q9ULD4 1205 aa10.46□□□□□ -0.74
CPM-201ENST00000338356 TOPBP1Q92547 1522 aa10.46□□□□□ -0.74
CPM-201ENST00000338356 SMG6Q86US8 1419 aaKnown RBP10.45□□□□□ -0.74
CPM-201ENST00000338356 ELL2O00472 640 aaPredicted RBP10.45□□□□□ -0.74
CPM-201ENST00000338356 NGLY1Q96IV0 654 aa10.45□□□□□ -0.74
CPM-201ENST00000338356 E9PSI1 815 aa10.44□□□□□ -0.74
CPM-201ENST00000338356 NBPF8Q3BBV2 869 aa10.44□□□□□ -0.74
CPM-201ENST00000338356 NBPF14Q5TI25 921 aa10.44□□□□□ -0.74
CPM-201ENST00000338356 TOMM22Q9NS69 142 aa10.44□□□□□ -0.74
CPM-201ENST00000338356 PRKRIP1Q9H875 184 aaPredicted RBP10.44□□□□□ -0.74
CPM-201ENST00000338356 STRN4Q9NRL3 753 aa10.44□□□□□ -0.74
CPM-201ENST00000338356 CNTLNQ9NXG0 1405 aa10.44□□□□□ -0.74
CPM-201ENST00000338356 ST20-MTHFSA0A0A6YYL1 179 aa10.44□□□□□ -0.74
CPM-201ENST00000338356 RBM10P98175 930 aaKnown RBP10.44□□□□□ -0.74
CPM-201ENST00000338356 VPS53Q5VIR6 699 aa10.44□□□□□ -0.74
CPM-201ENST00000338356 ZKSCAN2Q63HK3 967 aa10.44□□□□□ -0.74
CPM-201ENST00000338356 STAC3Q96MF2 364 aa10.44□□□□□ -0.74
CPM-201ENST00000338356 TEFQ10587 303 aa10.43□□□□□ -0.74
CPM-201ENST00000338356 NECTIN2Q92692 538 aa10.43□□□□□ -0.74
CPM-201ENST00000338356 CCAR1Q8IX12 1150 aaKnown RBP10.43□□□□□ -0.74
CPM-201ENST00000338356 PRM3Q9NNZ6 103 aa10.43□□□□□ -0.74
CPM-201ENST00000338356 NLRP2Q9NX02 1062 aa10.43□□□□□ -0.74
CPM-201ENST00000338356 FAM43AQ8N2R8 423 aa10.43□□□□□ -0.74
CPM-201ENST00000338356 TRAK1Q9UPV9 953 aa10.42□□□□□ -0.74
CPM-201ENST00000338356 MIA2Q96PC5 1412 aa10.42□□□□□ -0.74
CPM-201ENST00000338356 BECN2A8MW95 431 aa10.42□□□□□ -0.74
CPM-201ENST00000338356 TEX35Q5T0J7 233 aa10.41□□□□□ -0.74
CPM-201ENST00000338356 CHMP5Q9NZZ3 219 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms