RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 RUNDC1Q96C34 613 aa20.37■□□□□ 0.85
NSMCE3-201ENST00000332303 FGD6Q6ZV73 1430 aa20.37■□□□□ 0.85
NSMCE3-201ENST00000332303 MARCH6O60337 910 aa20.37■□□□□ 0.85
NSMCE3-201ENST00000332303 EVA1CP58658 441 aa20.37■□□□□ 0.85
NSMCE3-201ENST00000332303 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.36■□□□□ 0.85
NSMCE3-201ENST00000332303 TPM3P06753 285 aa20.36■□□□□ 0.85
NSMCE3-201ENST00000332303 DDX58O95786 925 aaKnown RBP20.35■□□□□ 0.85
NSMCE3-201ENST00000332303 AKAP17AQ02040 695 aaKnown RBP20.35■□□□□ 0.85
NSMCE3-201ENST00000332303 CREBRFQ8IUR6 639 aa20.35■□□□□ 0.85
NSMCE3-201ENST00000332303 ROCK1Q13464 1354 aa20.34■□□□□ 0.85
NSMCE3-201ENST00000332303 CCDC7Q96M83 1385 aa20.34■□□□□ 0.85
NSMCE3-201ENST00000332303 GNAI1P63096 354 aa20.33■□□□□ 0.85
NSMCE3-201ENST00000332303 KIF7Q2M1P5 1343 aa20.33■□□□□ 0.85
NSMCE3-201ENST00000332303 SLC4A3P48751 1232 aa20.33■□□□□ 0.85
NSMCE3-201ENST00000332303 FKBP5Q13451 457 aaPredicted RBP20.33■□□□□ 0.85
NSMCE3-201ENST00000332303 SYNE3Q6ZMZ3 975 aa20.33■□□□□ 0.85
NSMCE3-201ENST00000332303 ZNF644Q9H582 1327 aaPredicted RBP20.33■□□□□ 0.84
NSMCE3-201ENST00000332303 FGD5Q6ZNL6 1462 aa20.32■□□□□ 0.84
NSMCE3-201ENST00000332303 BECN2A8MW95 431 aa20.32■□□□□ 0.84
NSMCE3-201ENST00000332303 IFIT2P09913 472 aaKnown RBP20.32■□□□□ 0.84
NSMCE3-201ENST00000332303 PSME1Q06323 249 aa20.32■□□□□ 0.84
NSMCE3-201ENST00000332303 GOLGA6L19H0YKK7 550 aa20.31■□□□□ 0.84
NSMCE3-201ENST00000332303 AAMPQ13685 434 aa20.3■□□□□ 0.84
NSMCE3-201ENST00000332303 ANKRD50Q9ULJ7 1429 aa20.3■□□□□ 0.84
NSMCE3-201ENST00000332303 ARID3AQ99856 593 aa20.3■□□□□ 0.84
NSMCE3-201ENST00000332303 GOLGA6L1Q8N7Z2 621 aa20.28■□□□□ 0.84
NSMCE3-201ENST00000332303 MIA2Q96PC5 1412 aa20.28■□□□□ 0.84
NSMCE3-201ENST00000332303 HSP90AB4PQ58FF6 505 aa20.28■□□□□ 0.84
NSMCE3-201ENST00000332303 CEP89Q96ST8 783 aa20.28■□□□□ 0.84
NSMCE3-201ENST00000332303 G3BP1Q13283 466 aaKnown RBP eCLIP20.28■□□□□ 0.84
NSMCE3-201ENST00000332303 RNF20Q5VTR2 975 aa20.28■□□□□ 0.84
NSMCE3-201ENST00000332303 FOXD4L6Q3SYB3 417 aaPredicted RBP20.27■□□□□ 0.84
NSMCE3-201ENST00000332303 FOXD4L3Q6VB84 417 aaPredicted RBP20.27■□□□□ 0.84
NSMCE3-201ENST00000332303 GSE1Q14687 1217 aa20.27■□□□□ 0.84
NSMCE3-201ENST00000332303 TPD52L1Q16890 204 aaPredicted RBP20.27■□□□□ 0.84
NSMCE3-201ENST00000332303 MCTP1Q6DN14 999 aa20.27■□□□□ 0.84
NSMCE3-201ENST00000332303 VPS53Q5VIR6 699 aa20.27■□□□□ 0.83
NSMCE3-201ENST00000332303 NECTIN2Q92692 538 aa20.27■□□□□ 0.83
NSMCE3-201ENST00000332303 TSR1Q2NL82 804 aaKnown RBP20.26■□□□□ 0.83
NSMCE3-201ENST00000332303 ANO2Q9NQ90 1003 aa20.26■□□□□ 0.83
NSMCE3-201ENST00000332303 CHMP5Q9NZZ3 219 aa20.26■□□□□ 0.83
NSMCE3-201ENST00000332303 PES1O00541 588 aaKnown RBP20.26■□□□□ 0.83
NSMCE3-201ENST00000332303 TSPYL4Q9UJ04 414 aa20.25■□□□□ 0.83
NSMCE3-201ENST00000332303 CUX1P39880 1505 aa20.25■□□□□ 0.83
NSMCE3-201ENST00000332303 CPLX1O14810 134 aa20.25■□□□□ 0.83
NSMCE3-201ENST00000332303 GGNBP2Q9H3C7 697 aa20.25■□□□□ 0.83
NSMCE3-201ENST00000332303 FANCIQ9NVI1 1328 aa20.25■□□□□ 0.83
NSMCE3-201ENST00000332303 RAPGEF4Q8WZA2 1011 aa20.24■□□□□ 0.83
NSMCE3-201ENST00000332303 NOL10Q9BSC4 688 aaKnown RBP20.24■□□□□ 0.83
NSMCE3-201ENST00000332303 TRDNQ13061 729 aa20.23■□□□□ 0.83
NSMCE3-201ENST00000332303 TRIM29Q14134 588 aa20.23■□□□□ 0.83
NSMCE3-201ENST00000332303 AMOTL1Q8IY63 956 aa20.23■□□□□ 0.83
NSMCE3-201ENST00000332303 RAD54L2Q9Y4B4 1467 aa20.23■□□□□ 0.83
NSMCE3-201ENST00000332303 FAM69CQ0P6D2 419 aa20.23■□□□□ 0.83
NSMCE3-201ENST00000332303 INTS3Q68E01 1043 aaKnown RBP20.23■□□□□ 0.83
NSMCE3-201ENST00000332303 TPM1P09493 284 aa20.22■□□□□ 0.83
NSMCE3-201ENST00000332303 LNPKQ9C0E8 428 aa20.22■□□□□ 0.83
NSMCE3-201ENST00000332303 HMOX1P09601 288 aa20.22■□□□□ 0.83
NSMCE3-201ENST00000332303 APPP05067 770 aa20.22■□□□□ 0.83
NSMCE3-201ENST00000332303 A0A0U1RQG5 324 aaPredicted RBP20.22■□□□□ 0.83
NSMCE3-201ENST00000332303 CNTLNQ9NXG0 1405 aa20.22■□□□□ 0.83
NSMCE3-201ENST00000332303 BRD4O60885 1362 aaPredicted RBP20.21■□□□□ 0.83
NSMCE3-201ENST00000332303 ERC2O15083 957 aa20.2■□□□□ 0.82
NSMCE3-201ENST00000332303 LRRC9Q6ZRR7 1453 aa20.2■□□□□ 0.82
NSMCE3-201ENST00000332303 NUCB2P80303 420 aa20.19■□□□□ 0.82
NSMCE3-201ENST00000332303 MTHFSP49914 203 aa20.18■□□□□ 0.82
NSMCE3-201ENST00000332303 SYTL4Q96C24 671 aaPredicted RBP20.18■□□□□ 0.82
NSMCE3-201ENST00000332303 TMEM132EQ6IEE7 984 aa20.18■□□□□ 0.82
NSMCE3-201ENST00000332303 TPM2P07951 284 aa20.17■□□□□ 0.82
NSMCE3-201ENST00000332303 AMER1Q5JTC6 1135 aaPredicted RBP20.17■□□□□ 0.82
NSMCE3-201ENST00000332303 VPS37DQ86XT2 251 aa20.17■□□□□ 0.82
NSMCE3-201ENST00000332303 CABP2Q9NPB3 220 aa20.17■□□□□ 0.82
NSMCE3-201ENST00000332303 FYCO1Q9BQS8 1478 aa20.17■□□□□ 0.82
NSMCE3-201ENST00000332303 ADAMTS8Q9UP79 889 aa20.17■□□□□ 0.82
NSMCE3-201ENST00000332303 CASKIN1Q8WXD9 1431 aa20.17■□□□□ 0.82
NSMCE3-201ENST00000332303 NLRP6P59044 892 aa20.16■□□□□ 0.82
NSMCE3-201ENST00000332303 BICD2Q8TD16 824 aa20.16■□□□□ 0.82
NSMCE3-201ENST00000332303 SMC3Q9UQE7 1217 aa20.16■□□□□ 0.82
NSMCE3-201ENST00000332303 TCP11L2Q8N4U5 519 aa20.15■□□□□ 0.82
NSMCE3-201ENST00000332303 C22orf23Q9BZE7 217 aa20.15■□□□□ 0.82
NSMCE3-201ENST00000332303 PDE4CQ08493 712 aa20.15■□□□□ 0.82
NSMCE3-201ENST00000332303 AFAP1Q8N556 730 aa20.15■□□□□ 0.82
NSMCE3-201ENST00000332303 PANK1Q8TE04 598 aa20.15■□□□□ 0.82
NSMCE3-201ENST00000332303 NCOA2Q15596 1464 aa20.15■□□□□ 0.82
NSMCE3-201ENST00000332303 CCDC47Q96A33 483 aaKnown RBP20.15■□□□□ 0.82
NSMCE3-201ENST00000332303 WASHC2AQ641Q2 1341 aa20.15■□□□□ 0.82
NSMCE3-201ENST00000332303 MSH5O43196 834 aa20.14■□□□□ 0.82
NSMCE3-201ENST00000332303 CFAP70Q5T0N1 1121 aa20.14■□□□□ 0.82
NSMCE3-201ENST00000332303 NLRP2Q9NX02 1062 aa20.14■□□□□ 0.82
NSMCE3-201ENST00000332303 VPS37CA5D8V6 355 aaPredicted RBP20.14■□□□□ 0.81
NSMCE3-201ENST00000332303 ATF3P18847 181 aa20.14■□□□□ 0.81
NSMCE3-201ENST00000332303 IPO7O95373 1038 aaKnown RBP20.14■□□□□ 0.81
NSMCE3-201ENST00000332303 UBTFL1P0CB47 393 aaPredicted RBP20.14■□□□□ 0.81
NSMCE3-201ENST00000332303 RIC3Q7Z5B4 369 aa20.14■□□□□ 0.81
NSMCE3-201ENST00000332303 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.14■□□□□ 0.81
NSMCE3-201ENST00000332303 KIF21BO75037 1637 aa20.14■□□□□ 0.81
NSMCE3-201ENST00000332303 TNNT3P45378 269 aaPredicted RBP20.14■□□□□ 0.81
NSMCE3-201ENST00000332303 ANKRD20A12PQ8NF67 263 aa20.14■□□□□ 0.81
NSMCE3-201ENST00000332303 HOOK1Q9UJC3 728 aaKnown RBP20.12■□□□□ 0.81
NSMCE3-201ENST00000332303 TRIM34Q9BYJ4 488 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms