RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 KCNA6P17658 529 aa27.55■■■□□ 2
RAB28-202ENST00000330852 HSPA1LP34931 641 aa27.55■■■□□ 2
RAB28-202ENST00000330852 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.52■■■□□ 2
RAB28-202ENST00000330852 SLC26A8Q96RN1 970 aa27.52■■■□□ 2
RAB28-202ENST00000330852 PLEKHG1Q9ULL1 1385 aa27.52■■■□□ 2
RAB28-202ENST00000330852 RIMS2Q9UQ26 1411 aa27.52■■■□□ 2
RAB28-202ENST00000330852 BCANQ96GW7 911 aa27.49■■□□□ 1.99
RAB28-202ENST00000330852 PPP1R15AO75807 674 aaPredicted RBP27.48■■□□□ 1.99
RAB28-202ENST00000330852 NWD1Q149M9 1564 aa27.48■■□□□ 1.99
RAB28-202ENST00000330852 NKTRP30414 1462 aaKnown RBP27.47■■□□□ 1.99
RAB28-202ENST00000330852 CHGAP10645 457 aaKnown RBP27.47■■□□□ 1.99
RAB28-202ENST00000330852 CHD2O14647 1828 aaKnown RBP27.45■■□□□ 1.98
RAB28-202ENST00000330852 TMEM94Q12767 1356 aa27.44■■□□□ 1.98
RAB28-202ENST00000330852 SPHKAPQ2M3C7 1700 aa27.44■■□□□ 1.98
RAB28-202ENST00000330852 PROSER2Q86WR7 435 aaPredicted RBP27.44■■□□□ 1.98
RAB28-202ENST00000330852 TBX22Q9Y458 520 aa27.44■■□□□ 1.98
RAB28-202ENST00000330852 NAIPQ13075 1403 aa27.43■■□□□ 1.98
RAB28-202ENST00000330852 ILDR2Q71H61 639 aa27.42■■□□□ 1.98
RAB28-202ENST00000330852 DIP2AQ14689 1571 aa27.39■■□□□ 1.98
RAB28-202ENST00000330852 PIK3R4Q99570 1358 aa27.37■■□□□ 1.97
RAB28-202ENST00000330852 FAM135BQ49AJ0 1406 aa27.37■■□□□ 1.97
RAB28-202ENST00000330852 HFM1A2PYH4 1435 aa27.35■■□□□ 1.97
RAB28-202ENST00000330852 MED1Q15648 1581 aaPredicted RBP27.35■■□□□ 1.97
RAB28-202ENST00000330852 ADAMTS13Q76LX8 1427 aa27.34■■□□□ 1.97
RAB28-202ENST00000330852 NCOA3Q9Y6Q9 1424 aa27.33■■□□□ 1.97
RAB28-202ENST00000330852 MSH6P52701 1360 aa27.33■■□□□ 1.96
RAB28-202ENST00000330852 SOCS7O14512 581 aa27.32■■□□□ 1.96
RAB28-202ENST00000330852 NUTM2DQ5VT03 806 aaPredicted RBP27.3■■□□□ 1.96
RAB28-202ENST00000330852 TRPM2O94759 1503 aa27.3■■□□□ 1.96
RAB28-202ENST00000330852 SENP3Q9H4L4 574 aaPredicted RBP27.29■■□□□ 1.96
RAB28-202ENST00000330852 KIF1BO60333 1816 aa27.28■■□□□ 1.96
RAB28-202ENST00000330852 RBM33Q96EV2 1170 aaKnown RBP27.27■■□□□ 1.96
RAB28-202ENST00000330852 CLTCL1P53675 1640 aa27.26■■□□□ 1.95
RAB28-202ENST00000330852 ZNF326Q5BKZ1 582 aaKnown RBP27.25■■□□□ 1.95
RAB28-202ENST00000330852 TRIM52Q96A61 297 aa27.25■■□□□ 1.95
RAB28-202ENST00000330852 SETBP1Q9Y6X0 1596 aa27.25■■□□□ 1.95
RAB28-202ENST00000330852 ROBO1Q9Y6N7 1651 aa27.25■■□□□ 1.95
RAB28-202ENST00000330852 SLAIN2Q9P270 581 aa27.22■■□□□ 1.95
RAB28-202ENST00000330852 NRXN3Q9Y4C0 1643 aa27.2■■□□□ 1.95
RAB28-202ENST00000330852 SLC4A1APQ9BWU0 796 aaKnown RBP27.2■■□□□ 1.94
RAB28-202ENST00000330852 AMOTL2Q9Y2J4 779 aa27.19■■□□□ 1.94
RAB28-202ENST00000330852 PHF23Q9BUL5 403 aaPredicted RBP27.19■■□□□ 1.94
RAB28-202ENST00000330852 NEXMIFQ5QGS0 1516 aa27.18■■□□□ 1.94
RAB28-202ENST00000330852 C19orf44Q9H6X5 657 aa27.18■■□□□ 1.94
RAB28-202ENST00000330852 C14orf37Q86TY3 774 aa27.17■■□□□ 1.94
RAB28-202ENST00000330852 CADPS2Q86UW7 1296 aa27.16■■□□□ 1.94
RAB28-202ENST00000330852 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.16■■□□□ 1.94
RAB28-202ENST00000330852 PTPRUQ92729 1446 aa27.15■■□□□ 1.94
RAB28-202ENST00000330852 ACIN1Q9UKV3 1341 aaKnown RBP27.15■■□□□ 1.94
RAB28-202ENST00000330852 XRN1Q8IZH2 1706 aaKnown RBP27.15■■□□□ 1.94
RAB28-202ENST00000330852 RPGRIP1LQ68CZ1 1315 aa27.13■■□□□ 1.93
RAB28-202ENST00000330852 VGFO15240 615 aaPredicted RBP27.12■■□□□ 1.93
RAB28-202ENST00000330852 ATF3P18847 181 aa27.12■■□□□ 1.93
RAB28-202ENST00000330852 PHLPP1O60346 1717 aa27.1■■□□□ 1.93
RAB28-202ENST00000330852 DCCP43146 1447 aa27.09■■□□□ 1.93
RAB28-202ENST00000330852 METP08581 1390 aa27.08■■□□□ 1.93
RAB28-202ENST00000330852 PPLO60437 1756 aa27.04■■□□□ 1.92
RAB28-202ENST00000330852 JCADQ9P266 1359 aa27.02■■□□□ 1.92
RAB28-202ENST00000330852 MPHOSPH9Q99550 1183 aa27.02■■□□□ 1.92
RAB28-202ENST00000330852 COL16A1Q07092 1604 aaPredicted RBP27.01■■□□□ 1.91
RAB28-202ENST00000330852 AHDC1Q5TGY3 1603 aaPredicted RBP27.01■■□□□ 1.91
RAB28-202ENST00000330852 SETD1AO15047 1707 aaKnown RBP27■■□□□ 1.91
RAB28-202ENST00000330852 CCDC144AA2RUR9 1427 aa27■■□□□ 1.91
RAB28-202ENST00000330852 ADGRL3Q9HAR2 1447 aa26.97■■□□□ 1.91
RAB28-202ENST00000330852 FOXD1Q16676 465 aa26.96■■□□□ 1.91
RAB28-202ENST00000330852 PRAG1Q86YV5 1406 aa26.96■■□□□ 1.91
RAB28-202ENST00000330852 PTCH1Q13635 1447 aa26.96■■□□□ 1.91
RAB28-202ENST00000330852 SETD5Q9C0A6 1442 aa26.95■■□□□ 1.9
RAB28-202ENST00000330852 RGS17Q9UGC6 210 aaPredicted RBP26.95■■□□□ 1.9
RAB28-202ENST00000330852 BRINP3Q76B58 766 aa26.94■■□□□ 1.9
RAB28-202ENST00000330852 MST1RQ04912 1400 aa26.93■■□□□ 1.9
RAB28-202ENST00000330852 NALCNQ8IZF0 1738 aa26.92■■□□□ 1.9
RAB28-202ENST00000330852 SPATA31A6Q5VVP1 1343 aa26.92■■□□□ 1.9
RAB28-202ENST00000330852 SPATA31E1Q6ZUB1 1445 aa26.92■■□□□ 1.9
RAB28-202ENST00000330852 ANKRD30BQ9BXX2 1392 aa26.91■■□□□ 1.9
RAB28-202ENST00000330852 SHPRHQ149N8 1683 aa26.9■■□□□ 1.9
RAB28-202ENST00000330852 IFT172Q9UG01 1749 aa26.9■■□□□ 1.9
RAB28-202ENST00000330852 ASXL1Q8IXJ9 1541 aa26.89■■□□□ 1.9
RAB28-202ENST00000330852 NHSL1Q5SYE7 1610 aa26.87■■□□□ 1.89
RAB28-202ENST00000330852 ROBO2Q9HCK4 1378 aa26.87■■□□□ 1.89
RAB28-202ENST00000330852 RGL3Q3MIN7 710 aa26.86■■□□□ 1.89
RAB28-202ENST00000330852 ADGRF5Q8IZF2 1346 aa26.84■■□□□ 1.89
RAB28-202ENST00000330852 RAB3GAP2Q9H2M9 1393 aa26.81■■□□□ 1.88
RAB28-202ENST00000330852 C1orf167Q5SNV9 1468 aa26.8■■□□□ 1.88
RAB28-202ENST00000330852 POTEAQ6S8J7 498 aa26.8■■□□□ 1.88
RAB28-202ENST00000330852 LRRC59Q96AG4 307 aaKnown RBP26.8■■□□□ 1.88
RAB28-202ENST00000330852 TECPR2O15040 1411 aa26.78■■□□□ 1.88
RAB28-202ENST00000330852 LAMC1P11047 1609 aa26.78■■□□□ 1.88
RAB28-202ENST00000330852 PIK3C2GO75747 1445 aa26.77■■□□□ 1.88
RAB28-202ENST00000330852 LRP6O75581 1613 aa26.77■■□□□ 1.88
RAB28-202ENST00000330852 MEX3CQ5U5Q3 659 aaKnown RBP26.76■■□□□ 1.88
RAB28-202ENST00000330852 LRPPRCP42704 1394 aaKnown RBP26.76■■□□□ 1.87
RAB28-202ENST00000330852 KNDC1Q76NI1 1749 aa26.75■■□□□ 1.87
RAB28-202ENST00000330852 ABCC11Q96J66 1382 aa26.75■■□□□ 1.87
RAB28-202ENST00000330852 HRCP23327 699 aa26.75■■□□□ 1.87
RAB28-202ENST00000330852 CDC42BPGQ6DT37 1551 aa26.73■■□□□ 1.87
RAB28-202ENST00000330852 ZNF772Q68DY9 489 aaPredicted RBP26.73■■□□□ 1.87
RAB28-202ENST00000330852 MYOM2P54296 1465 aa26.71■■□□□ 1.87
RAB28-202ENST00000330852 NRXN1Q9ULB1 1477 aa26.7■■□□□ 1.86
RAB28-202ENST00000330852 C14orf93Q9H972 538 aaKnown RBP26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms