RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 G3V3G9 751 aa17.31■□□□□ 0.36
FNDC1-202ENST00000329629 FRAT2O75474 233 aaPredicted RBP17.31■□□□□ 0.36
FNDC1-202ENST00000329629 DCAF8Q5TAQ9 597 aa17.31■□□□□ 0.36
FNDC1-202ENST00000329629 NLRP13Q86W25 1043 aa17.31■□□□□ 0.36
FNDC1-202ENST00000329629 ATP6V1DQ9Y5K8 247 aa17.31■□□□□ 0.36
FNDC1-202ENST00000329629 PCMTD1Q96MG8 357 aaPredicted RBP17.3■□□□□ 0.36
FNDC1-202ENST00000329629 IGF1RP08069 1367 aa17.3■□□□□ 0.36
FNDC1-202ENST00000329629 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
FNDC1-202ENST00000329629 TEX35Q5T0J7 233 aa17.3■□□□□ 0.36
FNDC1-202ENST00000329629 ELL2O00472 640 aaPredicted RBP17.29■□□□□ 0.36
FNDC1-202ENST00000329629 MEX3CQ5U5Q3 659 aaKnown RBP17.29■□□□□ 0.36
FNDC1-202ENST00000329629 CALRP27797 417 aaKnown RBP17.29■□□□□ 0.36
FNDC1-202ENST00000329629 LMOD3Q0VAK6 560 aa17.29■□□□□ 0.36
FNDC1-202ENST00000329629 HOMER1Q86YM7 354 aa17.28■□□□□ 0.36
FNDC1-202ENST00000329629 RRP1P56182 461 aaKnown RBP17.28■□□□□ 0.36
FNDC1-202ENST00000329629 FBXW7Q969H0 707 aa17.27■□□□□ 0.36
FNDC1-202ENST00000329629 EVC2Q86UK5 1308 aa17.27■□□□□ 0.36
FNDC1-202ENST00000329629 COG3Q96JB2 828 aa17.27■□□□□ 0.36
FNDC1-202ENST00000329629 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.27■□□□□ 0.36
FNDC1-202ENST00000329629 AKAP17AQ02040 695 aaKnown RBP17.27■□□□□ 0.35
FNDC1-202ENST00000329629 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
FNDC1-202ENST00000329629 MINK1Q8N4C8 1332 aaPredicted RBP17.26■□□□□ 0.35
FNDC1-202ENST00000329629 COG6Q9Y2V7 657 aa17.25■□□□□ 0.35
FNDC1-202ENST00000329629 KIF15Q9NS87 1388 aa17.25■□□□□ 0.35
FNDC1-202ENST00000329629 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
FNDC1-202ENST00000329629 MYBBP1AQ9BQG0 1328 aaKnown RBP17.24■□□□□ 0.35
FNDC1-202ENST00000329629 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.24■□□□□ 0.35
FNDC1-202ENST00000329629 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
FNDC1-202ENST00000329629 ANO2Q9NQ90 1003 aa17.24■□□□□ 0.35
FNDC1-202ENST00000329629 DIAPH3Q9NSV4 1193 aa17.23■□□□□ 0.35
FNDC1-202ENST00000329629 C1orf141Q5JVX7 400 aa17.23■□□□□ 0.35
FNDC1-202ENST00000329629 FAM43AQ8N2R8 423 aa17.23■□□□□ 0.35
FNDC1-202ENST00000329629 BICD2Q8TD16 824 aa17.23■□□□□ 0.35
FNDC1-202ENST00000329629 ZKSCAN2Q63HK3 967 aa17.22■□□□□ 0.35
FNDC1-202ENST00000329629 PHLDB1Q86UU1 1377 aa17.22■□□□□ 0.35
FNDC1-202ENST00000329629 PSME1Q06323 249 aa17.22■□□□□ 0.35
FNDC1-202ENST00000329629 MYOM3Q5VTT5 1437 aa17.21■□□□□ 0.35
FNDC1-202ENST00000329629 SYNE3Q6ZMZ3 975 aa17.21■□□□□ 0.35
FNDC1-202ENST00000329629 IPO7O95373 1038 aaKnown RBP17.21■□□□□ 0.35
FNDC1-202ENST00000329629 FANCIQ9NVI1 1328 aa17.2■□□□□ 0.34
FNDC1-202ENST00000329629 CC2D2AQ9P2K1 1620 aa17.2■□□□□ 0.34
FNDC1-202ENST00000329629 ST20-MTHFSA0A0A6YYL1 179 aa17.2■□□□□ 0.34
FNDC1-202ENST00000329629 FOSBP53539 338 aa17.2■□□□□ 0.34
FNDC1-202ENST00000329629 TRIM29Q14134 588 aa17.2■□□□□ 0.34
FNDC1-202ENST00000329629 IFT57Q9NWB7 429 aa17.2■□□□□ 0.34
FNDC1-202ENST00000329629 PANK3Q9H999 370 aa17.19■□□□□ 0.34
FNDC1-202ENST00000329629 CHMP5Q9NZZ3 219 aa17.19■□□□□ 0.34
FNDC1-202ENST00000329629 CGNL1Q0VF96 1302 aa17.19■□□□□ 0.34
FNDC1-202ENST00000329629 ATF3P18847 181 aa17.19■□□□□ 0.34
FNDC1-202ENST00000329629 RRP12Q5JTH9 1297 aaKnown RBP17.19■□□□□ 0.34
FNDC1-202ENST00000329629 MSH5O43196 834 aa17.18■□□□□ 0.34
FNDC1-202ENST00000329629 RAD21O60216 631 aa17.18■□□□□ 0.34
FNDC1-202ENST00000329629 PRG4Q92954 1404 aaPredicted RBP17.18■□□□□ 0.34
FNDC1-202ENST00000329629 R3HCC1Q9Y3T6 440 aaKnown RBP17.18■□□□□ 0.34
FNDC1-202ENST00000329629 CHMP4CQ96CF2 233 aa17.18■□□□□ 0.34
FNDC1-202ENST00000329629 RUFY1Q96T51 708 aa17.18■□□□□ 0.34
FNDC1-202ENST00000329629 E9PSI1 815 aa17.17■□□□□ 0.34
FNDC1-202ENST00000329629 ANKRD20A12PQ8NF67 263 aa17.17■□□□□ 0.34
FNDC1-202ENST00000329629 ARHGAP5Q13017 1502 aa17.17■□□□□ 0.34
FNDC1-202ENST00000329629 NESP48681 1621 aa17.17■□□□□ 0.34
FNDC1-202ENST00000329629 SASS6Q6UVJ0 657 aa17.17■□□□□ 0.34
FNDC1-202ENST00000329629 IFT140Q96RY7 1462 aa17.17■□□□□ 0.34
FNDC1-202ENST00000329629 VPS37CA5D8V6 355 aaPredicted RBP17.16■□□□□ 0.34
FNDC1-202ENST00000329629 MNS1Q8NEH6 495 aa17.16■□□□□ 0.34
FNDC1-202ENST00000329629 REC8O95072 547 aa17.16■□□□□ 0.34
FNDC1-202ENST00000329629 CUX1P39880 1505 aa17.16■□□□□ 0.34
FNDC1-202ENST00000329629 AK7Q96M32 723 aa17.16■□□□□ 0.34
FNDC1-202ENST00000329629 NOM1Q5C9Z4 860 aaKnown RBP17.15■□□□□ 0.34
FNDC1-202ENST00000329629 NGEFQ8N5V2 710 aa17.15■□□□□ 0.34
FNDC1-202ENST00000329629 ZKSCAN1P17029 563 aaPredicted RBP17.15■□□□□ 0.34
FNDC1-202ENST00000329629 NAP1L1P55209 391 aaKnown RBP17.15■□□□□ 0.34
FNDC1-202ENST00000329629 RUFY2Q8WXA3 655 aa17.15■□□□□ 0.34
FNDC1-202ENST00000329629 ARGLU1Q9NWB6 273 aaPredicted RBP17.15■□□□□ 0.34
FNDC1-202ENST00000329629 CPLX1O14810 134 aa17.14■□□□□ 0.33
FNDC1-202ENST00000329629 CCDC47Q96A33 483 aaKnown RBP17.14■□□□□ 0.33
FNDC1-202ENST00000329629 SYNJ2O15056 1496 aa17.14■□□□□ 0.33
FNDC1-202ENST00000329629 ZNF644Q9H582 1327 aaPredicted RBP17.13■□□□□ 0.33
FNDC1-202ENST00000329629 TCEAL9Q9UHQ7 104 aa17.13■□□□□ 0.33
FNDC1-202ENST00000329629 NECTIN2Q92692 538 aa17.13■□□□□ 0.33
FNDC1-202ENST00000329629 ZBED9Q6R2W3 1325 aa17.13■□□□□ 0.33
FNDC1-202ENST00000329629 APPP05067 770 aa17.13■□□□□ 0.33
FNDC1-202ENST00000329629 CPLX2Q6PUV4 134 aaKnown RBP17.13■□□□□ 0.33
FNDC1-202ENST00000329629 HOOK1Q9UJC3 728 aaKnown RBP17.13■□□□□ 0.33
FNDC1-202ENST00000329629 TEFQ10587 303 aa17.12■□□□□ 0.33
FNDC1-202ENST00000329629 TTC5Q8N0Z6 440 aa17.12■□□□□ 0.33
FNDC1-202ENST00000329629 EIF2S2P20042 333 aaKnown RBP17.12■□□□□ 0.33
FNDC1-202ENST00000329629 SMC3Q9UQE7 1217 aa17.12■□□□□ 0.33
FNDC1-202ENST00000329629 IFIT2P09913 472 aaKnown RBP17.11■□□□□ 0.33
FNDC1-202ENST00000329629 NFKBIBQ15653 356 aa17.11■□□□□ 0.33
FNDC1-202ENST00000329629 ACBD3Q9H3P7 528 aa17.1■□□□□ 0.33
FNDC1-202ENST00000329629 DHX57Q6P158 1386 aaKnown RBP17.1■□□□□ 0.33
FNDC1-202ENST00000329629 NFXL1Q6ZNB6 911 aa17.1■□□□□ 0.33
FNDC1-202ENST00000329629 DDX19BQ9UMR2 479 aa17.1■□□□□ 0.33
FNDC1-202ENST00000329629 SYTL4Q96C24 671 aaPredicted RBP17.1■□□□□ 0.33
FNDC1-202ENST00000329629 C9orf78Q9NZ63 289 aaPredicted RBP17.09■□□□□ 0.33
FNDC1-202ENST00000329629 CCDC39Q9UFE4 941 aa17.09■□□□□ 0.33
FNDC1-202ENST00000329629 DHX16O60231 1041 aaKnown RBP17.09■□□□□ 0.33
FNDC1-202ENST00000329629 HSP90B2PQ58FF3 399 aa17.09■□□□□ 0.33
FNDC1-202ENST00000329629 APAF1O14727 1248 aa17.09■□□□□ 0.33
FNDC1-202ENST00000329629 PDILTQ8N807 584 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms