RNA–Protein interactions for RNA: ENST00000329420.12

YIF1B-201, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, humanhuman

TSL 3 BASIC

Gene YIF1B, Length 964 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1B-201ENST00000329420 TOM1O60784 492 aa24.81■■□□□ 1.56
YIF1B-201ENST00000329420 SCAF1Q9H7N4 1312 aaKnown RBP24.81■■□□□ 1.56
YIF1B-201ENST00000329420 RIMS2Q9UQ26 1411 aa24.79■■□□□ 1.56
YIF1B-201ENST00000329420 TRPM2O94759 1503 aa24.79■■□□□ 1.56
YIF1B-201ENST00000329420 PLEKHG1Q9ULL1 1385 aa24.77■■□□□ 1.56
YIF1B-201ENST00000329420 TRIM52Q96A61 297 aa24.76■■□□□ 1.55
YIF1B-201ENST00000329420 LRRC7Q96NW7 1537 aa24.76■■□□□ 1.55
YIF1B-201ENST00000329420 ALKQ9UM73 1620 aa24.75■■□□□ 1.55
YIF1B-201ENST00000329420 CLTCL1P53675 1640 aa24.75■■□□□ 1.55
YIF1B-201ENST00000329420 SLC4A1APQ9BWU0 796 aaKnown RBP24.74■■□□□ 1.55
YIF1B-201ENST00000329420 SETD5Q9C0A6 1442 aa24.73■■□□□ 1.55
YIF1B-201ENST00000329420 MED1Q15648 1581 aaPredicted RBP24.71■■□□□ 1.55
YIF1B-201ENST00000329420 CHGAP10645 457 aaKnown RBP24.71■■□□□ 1.55
YIF1B-201ENST00000329420 HDGFP51858 240 aaKnown RBP24.71■■□□□ 1.55
YIF1B-201ENST00000329420 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.71■■□□□ 1.55
YIF1B-201ENST00000329420 SLC26A8Q96RN1 970 aa24.71■■□□□ 1.55
YIF1B-201ENST00000329420 ADAMTS13Q76LX8 1427 aa24.69■■□□□ 1.54
YIF1B-201ENST00000329420 ACIN1Q9UKV3 1341 aaKnown RBP24.67■■□□□ 1.54
YIF1B-201ENST00000329420 KCNA6P17658 529 aa24.67■■□□□ 1.54
YIF1B-201ENST00000329420 MPHOSPH9Q99550 1183 aa24.67■■□□□ 1.54
YIF1B-201ENST00000329420 TBX22Q9Y458 520 aa24.67■■□□□ 1.54
YIF1B-201ENST00000329420 NWD1Q149M9 1564 aa24.67■■□□□ 1.54
YIF1B-201ENST00000329420 XIRP1Q702N8 1843 aaKnown RBP24.64■■□□□ 1.54
YIF1B-201ENST00000329420 NUTM2DQ5VT03 806 aaPredicted RBP24.64■■□□□ 1.54
YIF1B-201ENST00000329420 RAB3GAP2Q9H2M9 1393 aa24.64■■□□□ 1.53
YIF1B-201ENST00000329420 NEXMIFQ5QGS0 1516 aa24.63■■□□□ 1.53
YIF1B-201ENST00000329420 FOXD1Q16676 465 aa24.63■■□□□ 1.53
YIF1B-201ENST00000329420 PPP1R15AO75807 674 aaPredicted RBP24.62■■□□□ 1.53
YIF1B-201ENST00000329420 NRXN3Q9Y4C0 1643 aa24.61■■□□□ 1.53
YIF1B-201ENST00000329420 CHD2O14647 1828 aaKnown RBP24.61■■□□□ 1.53
YIF1B-201ENST00000329420 DIP2AQ14689 1571 aa24.61■■□□□ 1.53
YIF1B-201ENST00000329420 SETBP1Q9Y6X0 1596 aa24.6■■□□□ 1.53
YIF1B-201ENST00000329420 NKTRP30414 1462 aaKnown RBP24.6■■□□□ 1.53
YIF1B-201ENST00000329420 KIF1BO60333 1816 aa24.6■■□□□ 1.53
YIF1B-201ENST00000329420 HRCP23327 699 aa24.59■■□□□ 1.53
YIF1B-201ENST00000329420 PIK3R4Q99570 1358 aa24.58■■□□□ 1.53
YIF1B-201ENST00000329420 SENP3Q9H4L4 574 aaPredicted RBP24.57■■□□□ 1.52
YIF1B-201ENST00000329420 TMEM94Q12767 1356 aa24.56■■□□□ 1.52
YIF1B-201ENST00000329420 BCANQ96GW7 911 aa24.56■■□□□ 1.52
YIF1B-201ENST00000329420 SPATA31E1Q6ZUB1 1445 aa24.55■■□□□ 1.52
YIF1B-201ENST00000329420 ZNF326Q5BKZ1 582 aaKnown RBP24.55■■□□□ 1.52
YIF1B-201ENST00000329420 PTPRUQ92729 1446 aa24.53■■□□□ 1.52
YIF1B-201ENST00000329420 RPGRIP1LQ68CZ1 1315 aa24.53■■□□□ 1.52
YIF1B-201ENST00000329420 CCDC144AA2RUR9 1427 aa24.52■■□□□ 1.52
YIF1B-201ENST00000329420 PROSER2Q86WR7 435 aaPredicted RBP24.51■■□□□ 1.51
YIF1B-201ENST00000329420 PHF23Q9BUL5 403 aaPredicted RBP24.51■■□□□ 1.51
YIF1B-201ENST00000329420 VGFO15240 615 aaPredicted RBP24.48■■□□□ 1.51
YIF1B-201ENST00000329420 PPLO60437 1756 aa24.48■■□□□ 1.51
YIF1B-201ENST00000329420 METP08581 1390 aa24.48■■□□□ 1.51
YIF1B-201ENST00000329420 RBM33Q96EV2 1170 aaKnown RBP24.48■■□□□ 1.51
YIF1B-201ENST00000329420 NCOA3Q9Y6Q9 1424 aa24.48■■□□□ 1.51
YIF1B-201ENST00000329420 XRN1Q8IZH2 1706 aaKnown RBP24.46■■□□□ 1.51
YIF1B-201ENST00000329420 SETD1AO15047 1707 aaKnown RBP24.45■■□□□ 1.5
YIF1B-201ENST00000329420 AMOTL2Q9Y2J4 779 aa24.45■■□□□ 1.5
YIF1B-201ENST00000329420 ANKRD30BQ9BXX2 1392 aa24.43■■□□□ 1.5
YIF1B-201ENST00000329420 IFT172Q9UG01 1749 aa24.41■■□□□ 1.5
YIF1B-201ENST00000329420 FAM135BQ49AJ0 1406 aa24.4■■□□□ 1.5
YIF1B-201ENST00000329420 PRAG1Q86YV5 1406 aa24.39■■□□□ 1.5
YIF1B-201ENST00000329420 RGS17Q9UGC6 210 aaPredicted RBP24.39■■□□□ 1.49
YIF1B-201ENST00000329420 ADGRF5Q8IZF2 1346 aa24.38■■□□□ 1.49
YIF1B-201ENST00000329420 RGL3Q3MIN7 710 aa24.37■■□□□ 1.49
YIF1B-201ENST00000329420 MSH6P52701 1360 aa24.37■■□□□ 1.49
YIF1B-201ENST00000329420 C19orf44Q9H6X5 657 aa24.34■■□□□ 1.49
YIF1B-201ENST00000329420 NRXN1Q9ULB1 1477 aa24.33■■□□□ 1.49
YIF1B-201ENST00000329420 PIK3C2GO75747 1445 aa24.33■■□□□ 1.49
YIF1B-201ENST00000329420 SLAIN2Q9P270 581 aa24.32■■□□□ 1.48
YIF1B-201ENST00000329420 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.32■■□□□ 1.48
YIF1B-201ENST00000329420 PTCH1Q13635 1447 aa24.31■■□□□ 1.48
YIF1B-201ENST00000329420 DCCP43146 1447 aa24.29■■□□□ 1.48
YIF1B-201ENST00000329420 MYOM2P54296 1465 aa24.29■■□□□ 1.48
YIF1B-201ENST00000329420 ROBO2Q9HCK4 1378 aa24.29■■□□□ 1.48
YIF1B-201ENST00000329420 ROBO1Q9Y6N7 1651 aa24.28■■□□□ 1.48
YIF1B-201ENST00000329420 ASXL1Q8IXJ9 1541 aa24.27■■□□□ 1.48
YIF1B-201ENST00000329420 CADPS2Q86UW7 1296 aa24.26■■□□□ 1.47
YIF1B-201ENST00000329420 TECPR2O15040 1411 aa24.25■■□□□ 1.47
YIF1B-201ENST00000329420 ADGRL3Q9HAR2 1447 aa24.25■■□□□ 1.47
YIF1B-201ENST00000329420 C14orf93Q9H972 538 aaKnown RBP24.24■■□□□ 1.47
YIF1B-201ENST00000329420 NALCNQ8IZF0 1738 aa24.22■■□□□ 1.47
YIF1B-201ENST00000329420 C14orf37Q86TY3 774 aa24.22■■□□□ 1.47
YIF1B-201ENST00000329420 DHX57Q6P158 1386 aaKnown RBP24.21■■□□□ 1.47
YIF1B-201ENST00000329420 ABCC11Q96J66 1382 aa24.21■■□□□ 1.47
YIF1B-201ENST00000329420 ATF3P18847 181 aa24.21■■□□□ 1.47
YIF1B-201ENST00000329420 POTEAQ6S8J7 498 aa24.21■■□□□ 1.47
YIF1B-201ENST00000329420 MST1RQ04912 1400 aa24.2■■□□□ 1.46
YIF1B-201ENST00000329420 LRPPRCP42704 1394 aaKnown RBP24.2■■□□□ 1.46
YIF1B-201ENST00000329420 TMEM132EQ6IEE7 984 aa24.17■■□□□ 1.46
YIF1B-201ENST00000329420 CFAP70Q5T0N1 1121 aa24.16■■□□□ 1.46
YIF1B-201ENST00000329420 STAC3Q96MF2 364 aa24.16■■□□□ 1.46
YIF1B-201ENST00000329420 YTHDC2Q9H6S0 1430 aaKnown RBP24.16■■□□□ 1.46
YIF1B-201ENST00000329420 KNDC1Q76NI1 1749 aa24.15■■□□□ 1.46
YIF1B-201ENST00000329420 LAMC1P11047 1609 aa24.15■■□□□ 1.46
YIF1B-201ENST00000329420 BRINP3Q76B58 766 aa24.14■■□□□ 1.45
YIF1B-201ENST00000329420 AHDC1Q5TGY3 1603 aaPredicted RBP24.13■■□□□ 1.45
YIF1B-201ENST00000329420 ADGRB1O14514 1584 aa24.13■■□□□ 1.45
YIF1B-201ENST00000329420 SIRT1Q96EB6 747 aa24.13■■□□□ 1.45
YIF1B-201ENST00000329420 COL16A1Q07092 1604 aaPredicted RBP24.13■■□□□ 1.45
YIF1B-201ENST00000329420 DCAF11Q8TEB1 546 aa24.11■■□□□ 1.45
YIF1B-201ENST00000329420 WAPLQ7Z5K2 1190 aa24.1■■□□□ 1.45
YIF1B-201ENST00000329420 STK26Q9P289 416 aa24.1■■□□□ 1.45
YIF1B-201ENST00000329420 JCADQ9P266 1359 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms