RNA–Protein interactions for RNA: ENST00000328270.3

TNRC18-201, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 5

Gene TNRC18, Length 1,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-201ENST00000328270 CPS1P31327 1500 aa32.3■■■□□ 2.76
TNRC18-201ENST00000328270 KIF1BO60333 1816 aa32.29■■■□□ 2.76
TNRC18-201ENST00000328270 RAB3GAP2Q9H2M9 1393 aa32.27■■■□□ 2.76
TNRC18-201ENST00000328270 ACIN1Q9UKV3 1341 aaKnown RBP32.25■■■□□ 2.75
TNRC18-201ENST00000328270 HDGFP51858 240 aaKnown RBP32.23■■■□□ 2.75
TNRC18-201ENST00000328270 PPP1R15AO75807 674 aaPredicted RBP32.22■■■□□ 2.75
TNRC18-201ENST00000328270 MPHOSPH9Q99550 1183 aa32.22■■■□□ 2.75
TNRC18-201ENST00000328270 PLEKHG1Q9ULL1 1385 aa32.21■■■□□ 2.75
TNRC18-201ENST00000328270 FOXD1Q16676 465 aa32.2■■■□□ 2.75
TNRC18-201ENST00000328270 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.2■■■□□ 2.75
TNRC18-201ENST00000328270 NUTM2DQ5VT03 806 aaPredicted RBP32.17■■■□□ 2.74
TNRC18-201ENST00000328270 BCANQ96GW7 911 aa32.17■■■□□ 2.74
TNRC18-201ENST00000328270 SLC26A8Q96RN1 970 aa32.17■■■□□ 2.74
TNRC18-201ENST00000328270 SENP3Q9H4L4 574 aaPredicted RBP32.16■■■□□ 2.74
TNRC18-201ENST00000328270 ZNF326Q5BKZ1 582 aaKnown RBP32.14■■■□□ 2.74
TNRC18-201ENST00000328270 LRRC7Q96NW7 1537 aa32.12■■■□□ 2.73
TNRC18-201ENST00000328270 NEXMIFQ5QGS0 1516 aa32.11■■■□□ 2.73
TNRC18-201ENST00000328270 DIP2AQ14689 1571 aa32.08■■■□□ 2.73
TNRC18-201ENST00000328270 NWD1Q149M9 1564 aa32.08■■■□□ 2.73
TNRC18-201ENST00000328270 CHD2O14647 1828 aaKnown RBP32.08■■■□□ 2.73
TNRC18-201ENST00000328270 CCDC144AA2RUR9 1427 aa32.08■■■□□ 2.73
TNRC18-201ENST00000328270 XIRP1Q702N8 1843 aaKnown RBP32.07■■■□□ 2.73
TNRC18-201ENST00000328270 ADAMTS13Q76LX8 1427 aa32.07■■■□□ 2.72
TNRC18-201ENST00000328270 NRXN3Q9Y4C0 1643 aa32.05■■■□□ 2.72
TNRC18-201ENST00000328270 UBAP1LF5GYI3 381 aa32.04■■■□□ 2.72
TNRC18-201ENST00000328270 KCNA6P17658 529 aa32.04■■■□□ 2.72
TNRC18-201ENST00000328270 HRCP23327 699 aa32.04■■■□□ 2.72
TNRC18-201ENST00000328270 SETBP1Q9Y6X0 1596 aa32.03■■■□□ 2.72
TNRC18-201ENST00000328270 TBX22Q9Y458 520 aa32.03■■■□□ 2.72
TNRC18-201ENST00000328270 PPLO60437 1756 aa32.03■■■□□ 2.72
TNRC18-201ENST00000328270 NKTRP30414 1462 aaKnown RBP32■■■□□ 2.71
TNRC18-201ENST00000328270 SPATA31E1Q6ZUB1 1445 aa31.96■■■□□ 2.71
TNRC18-201ENST00000328270 RPGRIP1LQ68CZ1 1315 aa31.96■■■□□ 2.71
TNRC18-201ENST00000328270 IFT172Q9UG01 1749 aa31.95■■■□□ 2.7
TNRC18-201ENST00000328270 PIK3R4Q99570 1358 aa31.94■■■□□ 2.7
TNRC18-201ENST00000328270 ALKQ9UM73 1620 aa31.93■■■□□ 2.7
TNRC18-201ENST00000328270 TMEM94Q12767 1356 aa31.93■■■□□ 2.7
TNRC18-201ENST00000328270 TOM1O60784 492 aa31.92■■■□□ 2.7
TNRC18-201ENST00000328270 VGFO15240 615 aaPredicted RBP31.91■■■□□ 2.7
TNRC18-201ENST00000328270 PROSER2Q86WR7 435 aaPredicted RBP31.91■■■□□ 2.7
TNRC18-201ENST00000328270 RGL3Q3MIN7 710 aa31.88■■■□□ 2.69
TNRC18-201ENST00000328270 SETD1AO15047 1707 aaKnown RBP31.88■■■□□ 2.69
TNRC18-201ENST00000328270 XRN1Q8IZH2 1706 aaKnown RBP31.87■■■□□ 2.69
TNRC18-201ENST00000328270 PTPRUQ92729 1446 aa31.87■■■□□ 2.69
TNRC18-201ENST00000328270 ANKRD30BQ9BXX2 1392 aa31.87■■■□□ 2.69
TNRC18-201ENST00000328270 RBM33Q96EV2 1170 aaKnown RBP31.86■■■□□ 2.69
TNRC18-201ENST00000328270 SCAF1Q9H7N4 1312 aaKnown RBP31.84■■■□□ 2.69
TNRC18-201ENST00000328270 PIP4K2BP78356 416 aa31.84■■■□□ 2.69
TNRC18-201ENST00000328270 METP08581 1390 aa31.83■■■□□ 2.69
TNRC18-201ENST00000328270 AMOTL2Q9Y2J4 779 aa31.82■■■□□ 2.68
TNRC18-201ENST00000328270 ADGRF5Q8IZF2 1346 aa31.77■■■□□ 2.68
TNRC18-201ENST00000328270 MSH6P52701 1360 aa31.75■■■□□ 2.67
TNRC18-201ENST00000328270 NCOA3Q9Y6Q9 1424 aa31.75■■■□□ 2.67
TNRC18-201ENST00000328270 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.71■■■□□ 2.67
TNRC18-201ENST00000328270 PIK3C2GO75747 1445 aa31.7■■■□□ 2.67
TNRC18-201ENST00000328270 MYOM2P54296 1465 aa31.7■■■□□ 2.66
TNRC18-201ENST00000328270 C14orf37Q86TY3 774 aa31.69■■■□□ 2.66
TNRC18-201ENST00000328270 TRIM26Q12899 539 aaPredicted RBP31.68■■■□□ 2.66
TNRC18-201ENST00000328270 NRXN1Q9ULB1 1477 aa31.66■■■□□ 2.66
TNRC18-201ENST00000328270 HSPA1LP34931 641 aa31.65■■■□□ 2.66
TNRC18-201ENST00000328270 PTCH1Q13635 1447 aa31.64■■■□□ 2.66
TNRC18-201ENST00000328270 PRAG1Q86YV5 1406 aa31.64■■■□□ 2.66
TNRC18-201ENST00000328270 LAMC1P11047 1609 aa31.64■■■□□ 2.65
TNRC18-201ENST00000328270 ROBO1Q9Y6N7 1651 aa31.64■■■□□ 2.65
TNRC18-201ENST00000328270 ASXL1Q8IXJ9 1541 aa31.63■■■□□ 2.65
TNRC18-201ENST00000328270 NALCNQ8IZF0 1738 aa31.63■■■□□ 2.65
TNRC18-201ENST00000328270 C19orf44Q9H6X5 657 aa31.61■■■□□ 2.65
TNRC18-201ENST00000328270 FAM135BQ49AJ0 1406 aa31.6■■■□□ 2.65
TNRC18-201ENST00000328270 ROBO2Q9HCK4 1378 aa31.59■■■□□ 2.65
TNRC18-201ENST00000328270 KNDC1Q76NI1 1749 aa31.58■■■□□ 2.65
TNRC18-201ENST00000328270 SLAIN2Q9P270 581 aa31.57■■■□□ 2.64
TNRC18-201ENST00000328270 DCCP43146 1447 aa31.57■■■□□ 2.64
TNRC18-201ENST00000328270 ADGRL3Q9HAR2 1447 aa31.57■■■□□ 2.64
TNRC18-201ENST00000328270 ATF3P18847 181 aa31.56■■■□□ 2.64
TNRC18-201ENST00000328270 CADPS2Q86UW7 1296 aa31.56■■■□□ 2.64
TNRC18-201ENST00000328270 DCAF11Q8TEB1 546 aa31.54■■■□□ 2.64
TNRC18-201ENST00000328270 C14orf93Q9H972 538 aaKnown RBP31.54■■■□□ 2.64
TNRC18-201ENST00000328270 DHX57Q6P158 1386 aaKnown RBP31.54■■■□□ 2.64
TNRC18-201ENST00000328270 TMEM132EQ6IEE7 984 aa31.53■■■□□ 2.64
TNRC18-201ENST00000328270 LRPPRCP42704 1394 aaKnown RBP31.53■■■□□ 2.64
TNRC18-201ENST00000328270 TECPR2O15040 1411 aa31.52■■■□□ 2.64
TNRC18-201ENST00000328270 KDM2AQ9Y2K7 1162 aa31.52■■■□□ 2.64
TNRC18-201ENST00000328270 CFAP70Q5T0N1 1121 aa31.51■■■□□ 2.63
TNRC18-201ENST00000328270 STK26Q9P289 416 aa31.5■■■□□ 2.63
TNRC18-201ENST00000328270 YTHDC2Q9H6S0 1430 aaKnown RBP31.49■■■□□ 2.63
TNRC18-201ENST00000328270 ABCC11Q96J66 1382 aa31.48■■■□□ 2.63
TNRC18-201ENST00000328270 STAC3Q96MF2 364 aa31.48■■■□□ 2.63
TNRC18-201ENST00000328270 PHLPP1O60346 1717 aa31.45■■■□□ 2.63
TNRC18-201ENST00000328270 MST1RQ04912 1400 aa31.45■■■□□ 2.63
TNRC18-201ENST00000328270 ADGRB1O14514 1584 aa31.43■■■□□ 2.62
TNRC18-201ENST00000328270 WAPLQ7Z5K2 1190 aa31.39■■■□□ 2.62
TNRC18-201ENST00000328270 CDC42BPGQ6DT37 1551 aa31.39■■■□□ 2.61
TNRC18-201ENST00000328270 PLEKHH1Q9ULM0 1364 aa31.38■■■□□ 2.61
TNRC18-201ENST00000328270 SIN3AQ96ST3 1273 aa31.37■■■□□ 2.61
TNRC18-201ENST00000328270 AHDC1Q5TGY3 1603 aaPredicted RBP31.37■■■□□ 2.61
TNRC18-201ENST00000328270 KIAA1210Q9ULL0 1709 aa31.36■■■□□ 2.61
TNRC18-201ENST00000328270 BRINP3Q76B58 766 aa31.36■■■□□ 2.61
TNRC18-201ENST00000328270 COL16A1Q07092 1604 aaPredicted RBP31.35■■■□□ 2.61
TNRC18-201ENST00000328270 DLC1Q96QB1 1528 aa31.35■■■□□ 2.61
TNRC18-201ENST00000328270 MED1Q15648 1581 aaPredicted RBP31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms