RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 E9PSI1 815 aa18.29■□□□□ 0.52
CHRNA3-201ENST00000326828 TBC1D2Q9BYX2 928 aa18.28■□□□□ 0.52
CHRNA3-201ENST00000326828 PLEKHH2Q8IVE3 1493 aa18.28■□□□□ 0.52
CHRNA3-201ENST00000326828 MFAP1P55081 439 aaKnown RBP18.28■□□□□ 0.52
CHRNA3-201ENST00000326828 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.52
CHRNA3-201ENST00000326828 PCDHB15Q9Y5E8 787 aa18.27■□□□□ 0.52
CHRNA3-201ENST00000326828 RLBP1P12271 317 aa18.26■□□□□ 0.51
CHRNA3-201ENST00000326828 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
CHRNA3-201ENST00000326828 PLA2R1Q13018 1463 aa18.26■□□□□ 0.51
CHRNA3-201ENST00000326828 GOLGA6L3A6NEY3 463 aa18.26■□□□□ 0.51
CHRNA3-201ENST00000326828 PDZRN3Q9UPQ7 1066 aa18.26■□□□□ 0.51
CHRNA3-201ENST00000326828 CGNL1Q0VF96 1302 aa18.26■□□□□ 0.51
CHRNA3-201ENST00000326828 NKTRP30414 1462 aaKnown RBP18.26■□□□□ 0.51
CHRNA3-201ENST00000326828 MAGI1Q96QZ7 1491 aaPredicted RBP18.25■□□□□ 0.51
CHRNA3-201ENST00000326828 TRPM1Q7Z4N2 1603 aa18.25■□□□□ 0.51
CHRNA3-201ENST00000326828 L1TD1Q5T7N2 865 aaKnown RBP18.25■□□□□ 0.51
CHRNA3-201ENST00000326828 MAPK8IP3Q9UPT6 1336 aa18.25■□□□□ 0.51
CHRNA3-201ENST00000326828 XRCC6P12956 609 aaKnown RBP eCLIP18.25■□□□□ 0.51
CHRNA3-201ENST00000326828 CROCC2H7BZ55 1655 aa18.24■□□□□ 0.51
CHRNA3-201ENST00000326828 CARMIL2Q6F5E8 1435 aa18.23■□□□□ 0.51
CHRNA3-201ENST00000326828 EIF3AQ14152 1382 aaKnown RBP18.23■□□□□ 0.51
CHRNA3-201ENST00000326828 GPRASP1Q5JY77 1395 aa18.23■□□□□ 0.51
CHRNA3-201ENST00000326828 WWC1Q8IX03 1113 aa18.23■□□□□ 0.51
CHRNA3-201ENST00000326828 PNNQ9H307 717 aaKnown RBP18.23■□□□□ 0.51
CHRNA3-201ENST00000326828 ATP10BO94823 1461 aa18.21■□□□□ 0.51
CHRNA3-201ENST00000326828 CDCA8Q53HL2 280 aa18.21■□□□□ 0.51
CHRNA3-201ENST00000326828 TRMT2AQ8IZ69 625 aaKnown RBP18.21■□□□□ 0.51
CHRNA3-201ENST00000326828 WDR7Q9Y4E6 1490 aa18.2■□□□□ 0.5
CHRNA3-201ENST00000326828 PTPRGP23470 1445 aa18.2■□□□□ 0.5
CHRNA3-201ENST00000326828 FOXD4L1Q9NU39 408 aa18.2■□□□□ 0.5
CHRNA3-201ENST00000326828 CDC42BPAQ5VT25 1732 aa18.2■□□□□ 0.5
CHRNA3-201ENST00000326828 ANTXR1Q9H6X2 564 aa18.2■□□□□ 0.5
CHRNA3-201ENST00000326828 PDE3AQ14432 1141 aa18.19■□□□□ 0.5
CHRNA3-201ENST00000326828 TBC1D32Q96NH3 1257 aa18.19■□□□□ 0.5
CHRNA3-201ENST00000326828 MCM4P33991 863 aa18.18■□□□□ 0.5
CHRNA3-201ENST00000326828 CFAP70Q5T0N1 1121 aa18.17■□□□□ 0.5
CHRNA3-201ENST00000326828 CARD14Q9BXL6 1004 aa18.17■□□□□ 0.5
CHRNA3-201ENST00000326828 RARSP54136 660 aaKnown RBP18.17■□□□□ 0.5
CHRNA3-201ENST00000326828 FTSJ3Q8IY81 847 aaKnown RBP18.17■□□□□ 0.5
CHRNA3-201ENST00000326828 CCDC141Q6ZP82 1450 aa18.16■□□□□ 0.5
CHRNA3-201ENST00000326828 TRAK2O60296 914 aa18.16■□□□□ 0.5
CHRNA3-201ENST00000326828 VSIG10Q8N0Z9 540 aa18.16■□□□□ 0.5
CHRNA3-201ENST00000326828 TCP11L2Q8N4U5 519 aa18.16■□□□□ 0.5
CHRNA3-201ENST00000326828 PRDM15P57071 1507 aaPredicted RBP18.16■□□□□ 0.5
CHRNA3-201ENST00000326828 CHGAP10645 457 aaKnown RBP18.16■□□□□ 0.5
CHRNA3-201ENST00000326828 PMFBP1Q8TBY8 1022 aa18.16■□□□□ 0.5
CHRNA3-201ENST00000326828 ABCC10Q5T3U5 1492 aa18.16■□□□□ 0.5
CHRNA3-201ENST00000326828 SHANK2Q9UPX8 1470 aa18.16■□□□□ 0.5
CHRNA3-201ENST00000326828 MRC2Q9UBG0 1479 aa18.15■□□□□ 0.5
CHRNA3-201ENST00000326828 EIF4G3O43432 1585 aaKnown RBP18.15■□□□□ 0.5
CHRNA3-201ENST00000326828 MORC1Q86VD1 984 aa18.15■□□□□ 0.5
CHRNA3-201ENST00000326828 INSRP06213 1382 aa18.15■□□□□ 0.5
CHRNA3-201ENST00000326828 C22orf23Q9BZE7 217 aa18.14■□□□□ 0.49
CHRNA3-201ENST00000326828 RWDD1Q9H446 243 aaPredicted RBP18.13■□□□□ 0.49
CHRNA3-201ENST00000326828 ADCY10Q96PN6 1610 aa18.13■□□□□ 0.49
CHRNA3-201ENST00000326828 TSR2Q969E8 191 aaKnown RBP18.13■□□□□ 0.49
CHRNA3-201ENST00000326828 ERCC6Q03468 1493 aa18.12■□□□□ 0.49
CHRNA3-201ENST00000326828 ASXL1Q8IXJ9 1541 aa18.11■□□□□ 0.49
CHRNA3-201ENST00000326828 SYCP2Q9BX26 1530 aa18.11■□□□□ 0.49
CHRNA3-201ENST00000326828 IFT140Q96RY7 1462 aa18.11■□□□□ 0.49
CHRNA3-201ENST00000326828 ITPRIPQ8IWB1 547 aa18.1■□□□□ 0.49
CHRNA3-201ENST00000326828 HSP90AA1P07900 732 aaKnown RBP18.1■□□□□ 0.49
CHRNA3-201ENST00000326828 MYH16Q9H6N6 1097 aa18.1■□□□□ 0.49
CHRNA3-201ENST00000326828 SLC12A5Q9H2X9 1139 aa18.09■□□□□ 0.49
CHRNA3-201ENST00000326828 HSP90AA2PQ14568 343 aaPredicted RBP18.09■□□□□ 0.49
CHRNA3-201ENST00000326828 HSCBQ8IWL3 235 aa18.09■□□□□ 0.49
CHRNA3-201ENST00000326828 ARHGAP5Q13017 1502 aa18.09■□□□□ 0.49
CHRNA3-201ENST00000326828 U2AF1L5P0DN76 240 aaPredicted RBP18.08■□□□□ 0.49
CHRNA3-201ENST00000326828 U2AF1Q01081 240 aaKnown RBP eCLIP18.08■□□□□ 0.49
CHRNA3-201ENST00000326828 CHMP5Q9NZZ3 219 aa18.08■□□□□ 0.49
CHRNA3-201ENST00000326828 RSPH4AQ5TD94 716 aa18.08■□□□□ 0.48
CHRNA3-201ENST00000326828 TRAK1Q9UPV9 953 aa18.08■□□□□ 0.48
CHRNA3-201ENST00000326828 PIK3C2GO75747 1445 aa18.08■□□□□ 0.48
CHRNA3-201ENST00000326828 TRIM44Q96DX7 344 aaPredicted RBP18.07■□□□□ 0.48
CHRNA3-201ENST00000326828 SMC4Q9NTJ3 1288 aa18.07■□□□□ 0.48
CHRNA3-201ENST00000326828 NLRP1Q9C000 1473 aa18.06■□□□□ 0.48
CHRNA3-201ENST00000326828 MTHFSP49914 203 aa18.06■□□□□ 0.48
CHRNA3-201ENST00000326828 AFAP1Q8N556 730 aa18.06■□□□□ 0.48
CHRNA3-201ENST00000326828 RUNDC1Q96C34 613 aa18.06■□□□□ 0.48
CHRNA3-201ENST00000326828 GRPEL1Q9HAV7 217 aa18.05■□□□□ 0.48
CHRNA3-201ENST00000326828 SAMD9LQ8IVG5 1584 aa18.05■□□□□ 0.48
CHRNA3-201ENST00000326828 U2SURPO15042 1029 aaKnown RBP18.05■□□□□ 0.48
CHRNA3-201ENST00000326828 GLIPR1L2Q4G1C9 344 aa18.04■□□□□ 0.48
CHRNA3-201ENST00000326828 SAFB2Q14151 953 aaKnown RBP eCLIP18.04■□□□□ 0.48
CHRNA3-201ENST00000326828 LNPKQ9C0E8 428 aa18.04■□□□□ 0.48
CHRNA3-201ENST00000326828 HSP90AB1P08238 724 aaKnown RBP18.04■□□□□ 0.48
CHRNA3-201ENST00000326828 DZIP1LQ8IYY4 767 aaKnown RBP18.04■□□□□ 0.48
CHRNA3-201ENST00000326828 PKNOX2Q96KN3 472 aa18.03■□□□□ 0.48
CHRNA3-201ENST00000326828 ADGRF5Q8IZF2 1346 aa18.03■□□□□ 0.48
CHRNA3-201ENST00000326828 FSD2A1L4K1 749 aa18.03■□□□□ 0.48
CHRNA3-201ENST00000326828 MVPQ14764 893 aaKnown RBP18.03■□□□□ 0.48
CHRNA3-201ENST00000326828 NUTM2DQ5VT03 806 aaPredicted RBP18.02■□□□□ 0.48
CHRNA3-201ENST00000326828 MYO5CQ9NQX4 1742 aa18.02■□□□□ 0.48
CHRNA3-201ENST00000326828 ERBB4Q15303 1308 aa18.02■□□□□ 0.48
CHRNA3-201ENST00000326828 SYNJ2O15056 1496 aa18.02■□□□□ 0.48
CHRNA3-201ENST00000326828 SCAF11Q99590 1463 aaKnown RBP18.02■□□□□ 0.48
CHRNA3-201ENST00000326828 MRE11P49959 708 aa18.02■□□□□ 0.48
CHRNA3-201ENST00000326828 ZKSCAN2Q63HK3 967 aa18.02■□□□□ 0.48
CHRNA3-201ENST00000326828 CLCN1P35523 988 aa18.01■□□□□ 0.47
CHRNA3-201ENST00000326828 ESPNB1AK53 854 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms